KEGG   Oncorhynchus kisutch (coho salmon): 109894417
Entry
109894417         CDS       T09179                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109894417
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oki03041]
    109894417
   03400 DNA repair and recombination proteins [BR:oki03400]
    109894417
Spliceosome [BR:oki03041]
 Complex B
  Other components
   Prp19 complex
    109894417
 Complex C
   Prp19-CDC5 complex
    109894417
DNA repair and recombination proteins [BR:oki03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    109894417
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect DUF4072 Rap1_C
Other DBs
NCBI-GeneID: 109894417
NCBI-ProteinID: XP_020343468
Ensembl: ENSOKIG00005027411
LinkDB
Position
LG7:complement(29602891..29622601)
AA seq 806 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEDTADDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGINAQKKRKKKRGVDYNAEIPFEKKPSQGFYDTSMELYEGLEPNFK
RLRQQHLDGELRNEKEEKERKRDRQKIKKKKESDLPSAILQTSGVAEFTKKRSKLVLPAP
QISDAELEEVVKLGQASEVARQTAEESGITNSASSALLSEYSLTNSAMATGLRTPKTPAA
QDKILQEAQNLMALTNVDTPLKGGLNTPLHQSDFSGVTPQRQAVQTPNTVLTTPFRTPGP
GSEGSMTPQGGLTPKGPGTVTPGVTPGRTPLRDKLNINTEEQLADPAYAKHLQRESREQL
KLGLMSLPVPKNDFEIVLPENAETQLEEMETETGYIEDASEIELRRQAVRDAEREKELKL
RHTAVQRTLPRPSEVNESILRPMGTDPLSELQHAEEMIKKEMITMLHFDCLHHPPANQQR
SKQRGPSSTSNNAEHIAHLDRHPYQPISNEDLAQASELLSQEMEVVRAGMGHGDLSMEAY
SQVWEECYGQVLYLSAQSRYTRANLASKKDRIDSLEKKLEINRGHMTCEARRAARLERRL
KVLLGGYQSRAVGLLKQHGELWEQVEQAATELHTFTELKKQEDTAIPRRQEALREDVERQ
QEREKELQQRYGDLLLEKDALLSAKF
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgccgcgtataatgatcaaggggggtgtatggcgaaacaccgaggatgagatcctgaag
gcagcggtgatgaaatatgggaagaaccagtggtctcgtattgcctccctgctgcaccgc
aagtctgccaagcagtgcaaggcccgctggtatgagtggttggatccaagcattaagaaa
actgagtggtccagagaggaagaggagaaactactccatctggccaagctgatgcccacc
cagtggaggaccattgctcctatcataggacgcactgctgcccagtgtctggagcactac
gagttcctgctagacaaagcggcccagagggacaatgaggaagatacagctgacgatcca
aggaaactgaaacctggtgagatcgaccccaaccctgaaaccaagcccgctaggcctgac
cctgtggacatggatgaagatgagctggagatgctttctgaggccagagctcgtctggcc
aacactcaagggaagaaagctaagaggaaagccagagagaaacagctggaggaggccagg
cgtctggctgctctacagaagcgcagggagttgcgggccgcaggcatcaatgcccagaag
aagaggaagaagaagagaggagtggactacaatgctgagatcccttttgagaagaagcct
tctcagggtttctatgacaccagcatggagctctacgaaggtctggaaccaaacttcaaa
cgcctgcgacaacaacacctggatggagagctacgcaatgaaaaggaagagaaggagagg
aagagggatagacagaagatcaagaagaagaaggagagtgatcttccatcagccatcctg
cagaccagcggagtagcagagttcaccaagaaacggagcaaactggtgctgcctgcaccg
cagatctctgatgcggagctggaggaggtggtgaagctgggtcaggccagtgaagtggct
cgtcagaccgcagaggagtctgggatcactaactccgcctcctcagccctcctatcagaa
tacagcctcaccaacagcgctatggcaactgggctacgcacccccaagacccctgctgca
caggacaagatactacaggaggcccagaaccttatggctctgactaacgtagacactcct
ctgaaaggaggtctgaacactcctcttcaccagagtgacttctcaggagtcacaccccaa
agacaggcagtacagacacctaatactgtactgaccacacctttcaggacccccggtccg
gggtcagagggcagtatgaccccccagggaggtttaacccctaaaggacccggtactgtt
acccctggagtaaccccgggacgcacccctctacgagacaaactcaacatcaatactgag
gaacaactagcagatcctgcctacgctaaacatctgcaacgagagtcgagggagcagctg
aagctgggtctgatgtcgctgccagtcccgaagaatgactttgagattgttctaccagaa
aatgcagagactcaactggaggaaatggagacagagaccggatacatagaggatgcctcg
gagatagagctacgcagacaggctgttcgggacgcagagagggagaaagagctgaagctg
agacacactgctgtacagaggactttacccagaccatcagaggtgaatgagtccatcctg
cgtccaatgggaacagatcctctgtcagagctgcaacatgctgaggagatgatcaagaag
gagatgatcaccatgctgcactttgactgtctacaccacccaccagccaaccaacagcgc
agcaaacaacgagggccttcctccacctccaacaacgcagaacacatcgcccacctggac
agacacccctaccagccaatcagcaatgaggatttggcacaggccagtgagttgctgagc
caggagatggaggtggtgagggcaggtatgggtcacggggacctgtccatggaggcctac
agccaggtgtgggaggagtgttacggccaggtgctgtacctctccgctcagagccgctac
accagggccaacctggcctccaagaaggacagaatagactccctggagaagaaactggag
ataaaccgaggccatatgacatgtgaggcccgtcgtgctgctcgtctggagcgccgtctc
aaggtgttactaggagggtaccagtcccgtgctgtaggcctactgaagcagcatggtgaa
ctgtgggagcaggttgagcaggcagctacagagctccacaccttcactgagctgaagaaa
caagaagacacagctataccccgcagacaagaggctctaagggaggatgtggagagacag
caggagagagagaaggagctgcaacagagatatggagacctgctgctggagaaagacgcc
ctgctgtctgccaaattctaa

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