Oncorhynchus kisutch (coho salmon): 109894603
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Entry
109894603 CDS
T09179
Name
(RefSeq) tubulin alpha-1C chain isoform X2
KO
K07374
tubulin alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04145
Phagosome
oki04210
Apoptosis
oki04517
IgSF CAM signaling
oki04530
Tight junction
oki04540
Gap junction
oki04814
Motor proteins
oki05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109894603
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109894603
09143 Cell growth and death
04210 Apoptosis
109894603
09144 Cellular community - eukaryotes
04530 Tight junction
109894603
04540 Gap junction
109894603
09142 Cell motility
04814 Motor proteins
109894603
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109894603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109894603
03036 Chromosome and associated proteins [BR:
oki03036
]
109894603
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109894603
04147 Exosome [BR:
oki04147
]
109894603
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109894603
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
109894603
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
109894603
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109894603
Exosomal proteins of other body fluids (saliva and urine)
109894603
Exosomal proteins of colorectal cancer cells
109894603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
109894603
NCBI-ProteinID:
XP_020343810
Ensembl:
ENSOKIG00005003801
UniProt:
A0A8C7D5F1
LinkDB
All DBs
Position
LG1:complement(38637353..38658079)
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGKMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRSGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPCN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSVEGEDEGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctcggtccatgtgggccaggctggagtccagatcggcaatgcatgc
tgggagctgtactgtcttgagcatgggatccaaccagatggcaagatgcccagtgacaag
accattggaggaggtgacgactcctttaacaccttcttcagtgagactggagctggcaag
cacgtccccagggctgtgtttgtggatctggagcccactgtcattgatgaggtgcgatct
ggaacttaccgccagctcttccaccctgagcagctgatcactgggaaggaggatgcagcc
aacaactacgcccgtgggcattacaccatcggcaaagagatcatcgacttggttctggac
aggatccgcaaactggctgaccagtgcactggcctccagggcttcctagtcttccacagc
tttggaggtggcactggttctggtttcacttccctgttgatggaacgcctgtctgttgac
tatggcaagaagtccaagcttgagttctccatctacccagctccccaggtgtccacagct
gttgttgagccctacaactcaatcctgaccacccacaccaccctggagcattctgactgt
gctttcatggtagacaatgaggccatctatgacatctgccgtaggaacctcgatatcgag
cgtccttcctacaccaacctgaacaggttgatcagccagattgtgtcctcaatcactgct
tcccttcgattcgacggtgccctcaatgttgatctgacagagttccagaccaacttggtg
ccctacccccgtatccacttccccctggccacctatgccccagtgatctcagcagagaag
gcttaccatgagcagctgactgtttcagagatcacaaatgcctgttttgagccatgtaat
cagatggtgaaatgtgacccacgtcacggcaagtacatggcctgctgtctcctgtatcgt
ggtgacgttgtgcccaaagatgttaacgctgccattgccaccatcaaaacaaaacgctcc
atccagtttgtagactggtgcccaactggtttcaaggttggtatcaactaccagccccca
actgtggtacctggtggagatctggccaaggtccagagggcagtgtgcatgcttagcaac
accactgcagtggctgaggcttgggcccgccttgaccacaagtttgacctgatgtatgcc
aagcgtgcattcgtgcactggtacgtaggtgagggtatggaggagggagagttctctgag
gccagggaagacatggctgccctggagaaagattatgaggaggtgggcgcagatagtgtg
gaaggagaggatgagggagaagagtactaa
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