Oncorhynchus kisutch (coho salmon): 109897836
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Entry
109897836 CDS
T09179
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial isoform X1
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
oki03029
]
109897836
Enzymes [BR:
oki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109897836
Mitochondrial biogenesis [BR:
oki03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
109897836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_3
PPR_2
Motif
Other DBs
NCBI-GeneID:
109897836
NCBI-ProteinID:
XP_020348028
Ensembl:
ENSOKIG00005010050
UniProt:
A0A8C7DLT1
LinkDB
All DBs
Position
LG10:complement(17534739..17575570)
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AA seq
1332 aa
AA seq
DB search
MSLLRLCALPKCLSGLILLERSVRRVSNAGHCHYFVTLRNNVERRISDPPWTSQRRHFSA
LIPKKEDGKKRVWEQSQLLDVLEARIQQLQSDIVLDVQHAKVQLVNASKSGRGASSGKSP
KNVSGWRTELLKVGQTGKGGGKDASAYKSRWMEKLIQEKTTKTKKLNLKLGIEDKPVKSR
KGKLMLPGTTQKNILTKAGKKTASTSKKSKTLKNQEPTAIQADTMAGAPVAAATVPIRKA
KGKGKASKEPAPEFSEARDQELAELERKTEAKAQELAEVEKLEWKLNQWAMSASPELVQD
NSEARMYEGVQLSVHCYLEACVFCGDIDRAQRLLLTHHRMISRRNLLNIGLYNVMMRVWA
KKGSLNQIGRMFILVEEAGLKPNLTSYCAALECMGRTPNCSPKVINRVLRQMKEDGLCVE
ELFRLCVFRQDERDMVLRAIHTVEPDFQPSINTVLHTCSSPLVKDFYTERADAKYPKLAF
SLEELRERFSRQLSMEQTSTITIHSVEAMKPVTPHMAKMRALLAEQRMVWHKALVGALRE
SNMILASITPKAVRLSLYPYLCLMDQKDYVDIMIQSLSNLPPSGESLHILAKELGNRVHN
KFCIRMKSHNQMVDKLSHIYNEYAELLAKDSKDFDVLPRERWWKLEAEHSSGPSLLGDNT
QWPHTVVVELGTYLVDLMVKHMKVNSDILNPANDRKFIPVLYHMYTFRSNKQVGFIKPHP
ILTQMQQDAMETTLTFDSYVMPMLCPPVPWTSAKFGAYLLTPTKMMRTVVGANQHEILLE
KCQDADLHAVLDSLNQLGNAAWRINQPLLDIIISIFNDKGNEKLDIPPPNSEAPKILRYS
QQDLATYSSAEKAHLKRELVKAKKKCSEMHSLRMDALYKLSIANHMRDEVFWFPHNMDFR
GRTYPCPPYFNHLGSDVTRAILVFAEGKPLGPGGLKWLKIHLVNLTGLKKRSSLAGRLEY
ANTIMDDILDSADNPLNGKKWWQNADEPWQALACCMEIANAVRSPDPTHFISHFPVHQDG
SCNGLQHYAALGRDVIGATSVNLIPCEVPQDVYSGVAQQVEEFRVRDSEKGLKIAQVLEG
FISRKVVKQTVMTVVYGVTRYGGRLQIEKRLKEVDDFPKEYVWDASHYLVQQVFSSLKEM
FTGTREIQDWLTESARLIAKSGNTVEWVTPLGLPIIQPYHRTRTQMLKGTIQDLSLQITH
DSKQKPDTVKQKNAFPPNFIHSLDSTHMMLTALYCYSAGLTFVSVHDCFWTHALTVDTMN
KVCREQFVALHSQPILQELSNFLLQKYCSGLSSEVKNNKFLEYRRMLLLLAKVPQTGDFD
LQQVKESTYFFS
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctattgagactgtgtgccttaccgaagtgtctgagtggtctaatattgttggaa
agaagtgttcgtcgtgtgtcaaatgctggccattgccactactttgttacactccggaat
aacgttgaaagacgaatatcagatccaccatggacatcacaacgaagacatttctcagct
ctgatcccaaagaaagaggatgggaaaaaacgagtatgggaacaatctcagctgttagat
gtgcttgaggccagaatccagcaactccaatctgacattgttttagatgtccaacatgca
aaggtacaattggtcaatgcttccaagtcggggagaggggcttcttcagggaagagtccc
aaaaatgtttctgggtggaggactgagttgctcaaggtgggacagactggtaagggaggg
ggcaaagatgcttcagcctacaaatcccgctggatggagaaactgattcaggagaagacg
actaaaacaaagaaactgaacctgaagctaggcatagaagataaacctgtgaaaagcaga
aaaggaaaactgatgctaccaggtaccacacaaaaaaacatattgacaaaagctggaaaa
aagactgcttcgacctctaaaaagagcaagactctgaaaaaccaagagccaactgctatc
caagccgacactatggcaggtgctccggttgctgctgcaactgtacctattagaaaagcc
aaaggaaaggggaaagcctcaaaggagccggctcctgagttttctgaggccagggaccag
gagctggctgagctggagaggaagacggaggccaaggcccaggagctggctgaggtggag
aagttggagtggaagcttaaccagtgggctatgtctgccagcccggagctcgtgcaggat
aacagcgaggccaggatgtacgagggcgtccagcttagtgtgcattgctacctggaggcc
tgtgtgttctgtggcgacattgaccgagcccagcgcctcctgctcactcaccaccgcatg
atcagccgacgcaacctgctcaacataggactctacaacgtcatgatgagggtctgggcc
aagaagggctctttgaaccagattggacgtatgttcattctggtagaagaggcaggtctg
aagcctaacctcacctcctactgtgctgcactggagtgtatgggcagaacccctaactgt
tctccaaaggtcatcaacagggtcctgcgtcagatgaaagaggatggcctgtgtgtggaa
gagctgtttagactctgcgtgttcaggcaggatgagagggacatggtgctgagggccatc
cataccgtggaaccagactttcaacccagcatcaacactgtcctgcacacttgctcctca
cctctggtcaaagacttctacacagagagggcagatgctaagtaccccaagttggccttc
agcctggaggagctgcgggagaggttcagccgtcagctgagcatggaacagactagcacc
atcaccattcactctgtggaggccatgaagcctgttaccccacacatggccaagatgagg
gctctgctggcagagcagcgaatggtctggcacaaagccctggttggggccctgagggag
agcaatatgatcctggccagcatcaccccgaaggccgtcagactcagcctctacccctac
ctctgtctgatggaccaaaaggactatgtagacatcatgatccagagtctgtctaacttg
ccacccagtggggagtctctccacatcctggccaaggagctgggaaacagggtccacaac
aagttctgcatccgcatgaagagccacaaccagatggtggacaagctcagccatatatac
aatgaatatgctgagctactagccaaagactctaaggattttgacgtattgcctagggaa
cgatggtggaagctggaggcggagcatagctctggtccctccctgctgggggacaatacc
caatggccccacacggtggtggtggagctgggcacctacctggtggacctcatggtcaag
cacatgaaggtgaacagcgacatcctcaaccctgccaatgacaggaagttcatccctgtc
ctctaccacatgtacaccttccgcagtaacaaacaggtcggcttcatcaagccgcacccc
atcctgacacagatgcagcaggacgccatggagaccacgctgacctttgactcctacgtg
atgcccatgctgtgcccgcccgtgccctggacctcggccaagttcggcgcctacctcctc
acccccaccaagatgatgcgcacggtggttggcgccaatcagcatgagatcctgctggag
aagtgccaggacgctgacctgcatgccgtgctggactccctcaaccagctgggcaacgcc
gcctggaggatcaaccagcccctgctagacatcatcatctccatcttcaacgataagggc
aatgagaagctggacatcccgccgcccaactccgaggcccccaagatcctccgctacagc
cagcaggacttggccacctactcctcagccgagaaggcccacctgaagagggagctggtc
aaggctaagaagaagtgcagtgagatgcacagcctcaggatggacgccctctataaactc
tccatcgccaaccacatgagggacgaggtcttctggttcccccacaacatggacttccgc
gggcggacgtacccgtgcccgccctacttcaaccacctgggcagcgatgtgaccagggcc
atcctggtgtttgcggaggggaagcccctggggccgggcggtctgaaatggctgaagatc
cacctggtcaacctgacgggcttgaagaaacgcagctcgctggccggcaggttggagtac
gccaacacaatcatggatgacatcctggactctgcagacaaccccctcaacggtaagaag
tggtggcagaatgcagatgaaccctggcaagccttggcctgctgtatggagatagccaac
gctgtcagatcacctgaccccacacacttcatctcccactttcctgtgcatcaggatggt
tcgtgtaatggtctccagcactacgcagccctgggtcgggatgtgatcggtgccacctct
gtgaacctaattccctgtgaggtgccccaggatgtctacagcggggtggcacagcaggtg
gaggagttccgtgtgcgggactcagagaagggtctgaagatcgcccaggtgctggagggc
ttcatcagcaggaaggtggtgaagcagacggtgatgacggtggtgtacggggtgacgcgc
tacggaggacgcctccagatagagaagaggctcaaggaggttgatgacttccccaaggag
tacgtatgggacgcctctcactatctggtccaacaggtgttcagcagtctgaaggagatg
ttcaccggcaccagagagatccaggactggctgacggagagcgccaggctcatcgctaaa
tcgggcaacacggtggagtgggtgacgcccctgggcctgcccatcattcaaccctaccac
cggaccaggacgcagatgctgaagggtaccattcaggacctaagtctccagatcacccat
gactctaaacagaagccagacacagtgaaacagaagaatgccttccctcctaacttcatc
cactctctggactccacacacatgatgctgactgctctctactgctacagcgccggcctg
acgttcgtctccgtccacgactgcttctggacccacgcccttacagtcgacacgatgaac
aaggtttgccgggagcagtttgtggcactgcacagccagcccatccttcaagagctgtcc
aacttcctactgcagaaatactgctctgggctatcgagcgaggtcaaaaacaataagttt
ttggagtaccggaggatgctgctattactggccaaagtgcctcaaacaggcgactttgat
ctccagcaggtgaaggaatccacgtacttcttcagctaa
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integrated database retrieval system
