Oncorhynchus kisutch (coho salmon): 109904069
Help
Entry
109904069 CDS
T09179
Name
(RefSeq) regulator of nonsense transcripts 3A-like isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03013
Nucleocytoplasmic transport
oki03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109904069
03015 mRNA surveillance pathway
109904069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109904069
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
109904069
mRNA cycle factors
P-body specific factors
109904069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
PagP
RRM_1
SUKH_6
Motif
Other DBs
NCBI-GeneID:
109904069
NCBI-ProteinID:
XP_031649448
Ensembl:
ENSOKIG00005000259
LinkDB
All DBs
Position
LG2:34023826..34045633
Genome browser
AA seq
490 aa
AA seq
DB search
MRSEKDQMPGGREKSVVEIQFRDIPREQDAVFVNSKQKEEKKEVFTKVVIRRLPPNLSKD
QLEEQLSPLPSFDYFEFFPADQSLYPHLFSRAYINFKNPEDILLFRDRFDGYVFIDNKGQ
EYPAVVEFAPFQKVSKKKLKKKDAKAGSIEEDPEYCRFLENYSCDEEKSMANPETLLGEI
EAKTRELIAKRTTPLLEYIKNKKLEKQRIREEKREERRRREMEKKRQREEEKRKRREEER
RKRKDADKLKKLSEKEIKIKLLKKSDRDDDMDSDRLKDKGDSGDTERAKWDKPSGQIKFK
EAKDKGQMESDKGEHGRRQRDKDHRGRDEERKRQRHHYEFDKFIRRKEETKWGKGYCQDR
AKKDGHHHGSYSYCPSTGDKVGKEDREGIGASRKDRTRNKVSDKARVCQSVLAHQDRGTS
QSEGPHQIGGALPNKDRPAMQLYQPGTRKCMGSASKGYELPIGQSPEHVAVDHCYEAIAM
GTGSEKSSED
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctgaaaaggaccaaatgcccggaggcagggagaaaagtgtcgtcgagatacaa
tttagagacattccgagggaacaggacgccgtctttgtcaactcaaagcagaaagaagag
aagaaggaggtatttactaaggtagtaataaggcgacttccacccaacctgtccaaggac
cagctggaagaacagctcagtcctcttccatcctttgactactttgagttcttccctgca
gatcaaagcctctacccacacttgttctccagagcttacatcaacttcaaaaacccagag
gacatcctgctcttcagagaccgctttgatggctatgttttcattgataacaaaggccag
gagtacccagctgtggtagagtttgcaccctttcagaaagtatccaagaagaaactcaaa
aagaaagatgccaaagccggaagcattgaagaagacccagagtactgtcggtttctggag
aactactcctgtgatgaggagaagtccatggccaaccctgaaaccctgctgggagagata
gaggccaagacaagggaactcatagccaaaagaacaacacctcttctggagtacatcaag
aataagaaacttgagaagcagaggataagagaggaaaagagagaggagcgtcgacgcagg
gagatggagaagaaacgccagagggaggaggagaaaaggaagcggagggaggaggagaga
cgcaaacgcaaggatgcggataaactgaagaagctgtcggagaaggagatcaagataaag
ctcctaaagaagagtgaccgggacgatgacatggactctgacaggctcaaggacaaaggg
gacagtggggatacggagagggccaagtgggacaaacccagtggacaaattaagttcaag
gaagccaaggacaagggtcagatggagagcgataagggagaacacggccgcaggcagaga
gacaaagaccacagaggaagagacgaggagaggaaacgacagcgccaccactatgagttt
gacaagttcatacggcgcaaggaggagaccaagtggggcaaaggctactgccaggaccgg
gccaagaaagatggccaccaccacggctcctactcctactgccccagtacgggtgacaaa
gtgggtaaggaggacagggagggcattggcgctagcaggaaggaccgcacccggaacaag
gtgagcgacaaggctcgtgtctgtcagtctgtgttagcccatcaggacagagggacgtcc
cagtcagaggggccacaccagataggaggggctctgccaaacaaggaccgaccggccatg
cagctctaccagcctggcactcgcaaatgcatgggctcagcgagcaaaggttacgagctc
cccatcggccagtcgccagaacacgttgcggtagatcactgctatgaggccattgccatg
ggaacaggctcggaaaagagtagtgaagattag
DBGET
integrated database retrieval system
