Oncorhynchus kisutch (coho salmon): 109905074
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Entry
109905074 CDS
T09179
Name
(RefSeq) platelet-derived growth factor receptor beta-like isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04010
MAPK signaling pathway
oki04020
Calcium signaling pathway
oki04510
Focal adhesion
oki04518
Integrin signaling
oki04540
Gap junction
oki04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109905074
04020 Calcium signaling pathway
109905074
09133 Signaling molecules and interaction
04518 Integrin signaling
109905074
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109905074
04540 Gap junction
109905074
09142 Cell motility
04810 Regulation of actin cytoskeleton
109905074
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oki01001
]
109905074
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oki04090
]
109905074
Enzymes [BR:
oki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
109905074
Protein kinases [BR:
oki01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
109905074
CD molecules [BR:
oki04090
]
Proteins
109905074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
Psg1
VEGFR-1-like_Ig-like
Motif
Other DBs
NCBI-GeneID:
109905074
NCBI-ProteinID:
XP_020357817
Ensembl:
ENSOKIG00005047175
UniProt:
A0A8C7N816
LinkDB
All DBs
Position
LG15:complement(26426256..26492035)
Genome browser
AA seq
1094 aa
AA seq
DB search
MRSVRVSTLHLTALLTALLHFCPEYRCVEISPSNSEVVMTPGDSMIFTCSSWGTVGWRFK
RNDDVPYFGVENQNTTSVLILDNVTWRHTGVYVCAEALTDEAREVAVFVPDPEVWFIESS
HGMVTKTSEEGTIPCVVTNPQINVTLYETDSDMHLKGVYIPSEGYRASLEDRTYVCRGEL
KGEEKESQEFYVLSIVVPETIDAYINASKTVLKQGEPLTVNCTVHGVELVFFSWDYPNRD
VDFIEPLTDILSSQSMRSCLTVSKATLANTGQYVCHVHESVQDQRATANVNITVLERGFV
ELRSVQERNVSAQLHQNVELRVEIESYPAPRVRWTKDNATVNGDNTDITRQEHETRYVSI
LTLVRIRTEQKGLYTVLVANGDDTKEVTFDLEVKVPPQITDLSDHHLPGKRHAVTCVAEG
VPSPSIQFFSCDSMLKCSNRSTVWQPLVSDPEILSIQTNISFNESRKVGQVRSQVTFHKP
QQVTVRCEASNKEGVRRRDVKLVSSTLFSQVAVLAAVLPLVVILITSIIILIAVWRKKPR
YEIRWKVIESVSLDGHEYIYVDPIHLPYDLAWEMARDSLVLGRTLGSGAFGRVVEATAYG
LSHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACTKQGPLYLVT
EYCRYGDLVDYLHRNKHTFLQYYAEKNQEDSGCRVSGGSTPLSQRKGYVSFGSEFDGGYM
DMSKDEPTVYVPMQELKDTIKYTDIQPSPYESPYQHHLYQEQDQTTVDSALVISDCPTLS
YSDLIGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMHDSNYVS
KGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGAPYPDLPMNELFYSALKR
GYRMAKPNHATDEVYEVMQKCWDEKYERRPEFSFLVHTMGNMLTDSYKKRYCQVNDEFFK
RDHPAVVRTKPRLSSHFPTPALTPSTAPATPQDTNPYPLTGDFRSEADGEEASYNDYIIP
IPDPKPEEEVCSEANDMPTKSLASSRALEDEEADSISQETVEADTIPEEKYLHANQALIP
LESSGTPEAEDSFL
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgaggagtgtcagagtgtccactctccatctgacagccctactaacagctcttttgcac
ttctgccctgagtaccgttgcgtggagatctcccctagcaacagcgaggtcgtcatgaca
ccgggcgactccatgatcttcacctgttctagctgggggacagtcggatggaggttcaag
cggaatgacgacgttccctattttggagtggagaaccagaacacaaccagtgttctcatt
ctggacaacgtgacgtggagacacacaggagtgtacgtctgtgccgaggctttgacggac
gaggctagagaggtggcagtctttgtgccggaccctgaagtgtggttcattgagagctcc
cacggcatggtgaccaagaccagcgaggaggggaccatcccctgtgtggtcaccaacccc
cagatcaacgtcaccctctacgagacggacagtgacatgcacctaaaaggggtctacatc
cccagtgagggctacagggcatccctggaggacaggacctatgtgtgtcgtggggagctg
aaaggagaggagaaagagtcccaggaattctacgtcttaagtattgttgtcccggagaca
atcgacgcctacatcaatgcgtctaagacggtgctgaagcagggcgagcctttgacagtg
aactgcacggtgcatggagtggagctggtcttcttctcctgggactaccccaacagagac
gtggacttcatcgagccattgacagatatcctgtcgtcccagagcatgcgctcctgcctc
accgtctctaaggcgacgctggccaacacagggcagtacgtgtgtcacgttcacgagagt
gtccaggaccagagggccaccgccaacgtcaacatcaccgtcctcgagcgaggcttcgtg
gagctgaggtctgtccaggagcgtaacgtctcggcccagctgcaccagaacgtagagctg
agggttgagatcgagtcctaccctgctccacgtgtccgctggaccaaagacaacgccacc
gtcaacggagacaacaccgacatcaccaggcaggagcacgagaccaggtacgtcagcata
ttgaccttggtgaggatcaggacggaacagaagggactttacactgttctcgtcgccaac
ggagacgacaccaaggaagtgacatttgatctggaggtcaaagttccccctcagataaca
gacctgtcggaccaccacctcccagggaagaggcatgcagtgacctgtgtggccgagggg
gtcccctccccatccatacagtttttcagctgtgacagcatgctcaagtgcagtaaccgg
agcacagtgtggcagcccctggtgtcagaccctgagatcctgagtatccagaccaacatc
agtttcaatgagagccgtaaggtgggccaggtccgcagccaggtcaccttccacaagccc
caacaggtgaccgtccgctgtgaggccagcaacaaggaaggagtccgcaggagagacgtc
aaactggtgtccagcactctgttctcccaggtggcagtgttggctgcggttctacccctg
gtggtcatcctcatcacctccatcatcatcctcatcgctgtgtggaggaagaagcctcgc
tatgagattagatggaaggtgatagagtcagtgagtctggatggccatgagtacatctac
gttgaccccatccacctgccctacgacctggcctgggagatggctcgagacagcctggtg
ctgggtcgtactcttggatccggggcgtttggcagggtggtcgaggcgactgcctacggt
ctcagccattcccagtccagcacgaaggtggcagtaaaaatgctcaaatccacagccagg
aggagtgagacccaggctctgatgtcagagctgaagatcatgagccacctggggcctcac
ctcaacatcgtcaacctgctgggggcctgcaccaaacagggtcctctctacctggtgacg
gagtactgtcgctatggagacctggtggactacttacacaggaacaagcacacgttcctg
cagtactacgctgagaagaaccaggaggactctggttgccgcgtctctggagggagcacc
cctctcagccagaggaaaggctacgtgtcgtttggcagtgagtttgacggtggctacatg
gacatgagtaaggacgagcccacggtgtacgtccccatgcaggagcttaaagacaccatc
aaatacactgacatccaaccttctccatatgagtcgccctaccagcaccacctttaccag
gaacaagaccagaccacagtggacagtgccctggtcatcagtgactgccctaccctcagc
tattctgacctcattggcttcagctaccaggtggccaagggcatggagttccttgcctcc
aagaactgtgtccatcgtgacctggccgccaggaacgtgttgatctgtgaggggaagctg
gtgaagatctgtgactttggtctagccagagacatcatgcacgactccaactacgtctcc
aaaggcagcaccttccttcctcttaagtggatggccccagagagtattttccataacctg
tacaccaccctgagtgacgtgtggtcctatggcatcctgctctgggagatcttcaccctg
ggaggagccccctaccctgatctgcccatgaatgagctgttctacagtgccttaaagaga
ggatatcgcatggccaaacctaaccacgccaccgatgaagtttatgaagtcatgcagaag
tgctgggatgagaagtacgagagaaggccagagttctcttttctggtgcacacaatgggg
aacatgctcacagacagctataaaaagagatactgccaggtcaacgatgagttcttcaag
cgtgaccacccagccgtggtccgcaccaaacccaggctctcctctcacttccccactccg
gccctaaccccgtccaccgcccctgccaccccccaggacacaaacccctaccccctcact
ggggacttcagatccgaggcagatggtgaggaagcttcctacaacgactacatcatcccc
atcccagaccccaagcctgaggaggaagtctgctccgaggctaacgacatgccaacgaaa
agcctcgcaagttctcgggctctggaggacgaggaggctgattccatctcccaggagaca
gtggaggcagacaccattccagaggagaaatatctccatgccaaccaggccctgattcca
ctggagtcctctggaacaccggaagcggaagacagcttcctgtaa
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