Oncorhynchus kisutch (coho salmon): 109905132
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Entry
109905132 CDS
T09179
Name
(RefSeq) RNA-binding motif protein, X chromosome isoform X1
KO
K12885
heterogeneous nuclear ribonucleoprotein G
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109905132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109905132
Spliceosome [BR:
oki03041
]
Common components
Common spliceosomal components
hnRNP proteins
109905132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM1CTR
RRM_7
Nup35_RRM_2
PHM7_cyt
RBD_DEAH11
RRM_5
DUF7373
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
109905132
NCBI-ProteinID:
XP_020357923
Ensembl:
ENSOKIG00005009657
UniProt:
A0A8C7DYN7
LinkDB
All DBs
Position
LG15:complement(29857676..29867183)
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AA seq
383 aa
AA seq
DB search
MAEADRPGKLFIGGLDTETDEKALEKYFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPA
DAKDAAREMNGKSLDGKPIKVEQATKPTFGRGPPPMHPRSRGPPRGLRGSRGAPSGMRGP
PSRDYYDNIGIVEPFFKGISSRGPPPLKRGPPIRNGGPPPKRHAPSPMGRTPMSRDRDPY
GPPPPRRESMSRRDDYPSPRDDYYSTKDSYSSRDYTSSRDTRDYAPPPRDYPQSSSRDDY
GSMSRGYSERDGYGGGREPKSYMERPSAAAYREPYGGYGNSRSAPPSRAPQPSYNGSGGS
SRYDDYGSSSRDGYGGRESYPSSRSDPYPPSRGERMGRQERGPAPPIERGYPPRDAYSGS
SRGAPRGGRGGTRVDRGIARSRY
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggcagaccgaccagggaagctattcatcggaggcctggacactgaaactgac
gaaaaggcccttgagaagtatttcagcaaatatggcagaatagtggaagttctgttgatg
aaagatcgggaaacaaacaaatcaagaggttttgcttttgtgacctttgagagtcctgca
gatgcaaaggatgctgcacgtgaaatgaatgggaagtcgcttgatggaaagcccatcaag
gttgaacaagctacgaaacctacttttggacgcggcccaccacccatgcatccacgcagc
cgtggtccccctagaggccttcgaggatctagaggagcaccaagtggaatgaggggtcca
ccatccagagactactatgataacataggaattgtagaaccctttttcaaagggatttca
tccagaggccccccaccactgaagagaggacctccgattcgtaatggaggccccccaccc
aagagacacgctccttctcctatgggtagaactcccatgtccagggacagggacccctat
ggcccaccccctccccgcagagagtcaatgtccagaagggatgattacccatcaccaagg
gatgactattacagcacaaaggacagctattctagccgggactatacgagttccagggat
acaagggactacgcaccaccaccaagggattatccccaatccagttcccgtgatgactat
gggtcaatgtccaggggctacagtgagcgtgatggctatggtggaggccgggaacccaaa
agctatatggagcgccctagtgcagccgcctatcgagagccctacggtggttacggtaac
tcacgcagcgccccaccctcaagggccccccaaccatcctacaatggcagtggcggaagc
agtcgctatgacgactatggcagcagttcccgggatggctatggcggtcgtgaaagttac
cccagcagtcgaagtgacccatacccccctagccgtggtgagcgaatgggcaggcaggag
cgggggccagcgccccctatcgagagaggctaccctcctcgtgacgcgtacagtggctca
agtcgtggagcaccccgtggtggccgcggaggcaccagagtcgatagaggaattgcccgc
agcagatactga
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