Oncorhynchus kisutch (coho salmon): 109907523
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Entry
109907523 CDS
T09179
Name
(RefSeq) antigen peptide transporter 2
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki02010
ABC transporters
oki04145
Phagosome
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109907523
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109907523
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109907523
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oki02000
]
109907523
Enzymes [BR:
oki01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
109907523
Transporters [BR:
oki02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
109907523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
Rad17
AAA_30
AAA_16
AAA_25
AAA_29
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
109907523
NCBI-ProteinID:
XP_020361127
Ensembl:
ENSOKIG00005048156
UniProt:
A0A8C7KYY1
LinkDB
All DBs
Position
LG17:complement(33668751..33673540)
Genome browser
AA seq
726 aa
AA seq
DB search
MTKMMLRTCVFAMAVGLCIDITTLAFGASISKTGTRTSDAFGNVVRLWVVAGIRLVLLLG
LSLLTLGSIKPVFKRWLAVHCFLAPVYETGRLMLYGGSPERVYRSLGLGSPSLWPLCTVA
AAAAALFWETTFPDSNGESNGKQKKQKARVLFMRVLIFYRPDILLLVGAFIFLSLAVLCE
MFIPFYTGKVIDILGTQYKWNNFLTAIILMGLYSLGSSFSAGCRGGLFMCAINSFTCRMK
VKLFGALVKQEIGFFETIKTGDITSRLSTDTTLMGRAVALNVNVLLRTLIKTVGMLSLMM
SLSWKLTLLMLMETPITGLLQSVHDNYYQRLSKEVQDSIARANEAAGETVGGIRTVRSFK
TEQHEAGRYNDRLMDTHNLKTRRDTVMAVYLLLRRLTAVVMQVAMLYYGRLFIQRGQMTT
GNLVSFILYQSDLADNIRTLIYIFGDMLNSVGAAGKVFEYLDREPQVSTKGTLQPETLTG
HVQFHNLSFSYPTRQERKVLQGFSLELRPGQLTALVGPSGGGKSTCVSLLERFYQPQQGE
ILLDGLPLQSYQHHYLHRKIAMVGQEPVLFSGSVKDNIAYGLADCSLERVQEAARRANAH
SFISQLEKGYDTDVGERGGQLSGGEKQRIAIARALIREPQVLILDEVTSALDTESEHMVQ
EALASCPSQTLLVIAHRLKTIERADQIILIDQGTVQEQGTHQELMDRKGSYYKLKERLFT
EDDVPH
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaatgatgctcagaacgtgcgtgttcgctatggctgtaggtctatgcattgac
ataacgacattggcttttggcgcatctatttccaaaactggaacaagaacttctgatgct
ttcgggaatgtggtgcgtctatgggttgtagcggggattcggttagttttactactcggt
ttatcgctactcacactaggatcgataaaacccgtattcaagcgctggttagcggtgcac
tgtttccttgccccggtctatgagactgggcgacttatgctgtatggaggttcaccggag
cgcgtgtatcgatctttgggtctggggagtccaagtttgtggccattgtgtaccgtggca
gcagctgcagcagccttattttgggagacaaccttccctgacagcaatggagaaagcaac
gggaaacagaagaagcagaaggcacgagtgctgttcatgagagtcctcatcttctacaga
cctgacatcctccttttagttggggcatttatattcctgtcactggctgtcctctgtgag
atgttcatcccattctacactggaaaagtgattgacatcttgggtacccagtacaagtgg
aataactttctcacagctatcatcctcatggggctttactctttgggaagctctttcagt
gctggctgtcgtggtggcctcttcatgtgtgccatcaacagcttcacctgcagaatgaaa
gtgaagctgtttggggccctggtgaagcaggagattggcttctttgagaccatcaagaca
ggtgacatcacgtcccggctgtccacagacaccaccctgatgggccgggcggtggcccta
aatgtcaacgtcctactgaggaccctcattaagaccgtgggtatgctgtcgctcatgatg
agcctgtcctggaagctcactctgctcatgctgatggagacgcccatcaccggcctgttg
caaagcgtccatgacaactattaccagaggctctctaaggaggtgcaggactctatagcc
agggcgaacgaggcagcgggggaaacagttggcggaatccggaccgtacgaagcttcaaa
actgagcagcatgaggctggtcgctataacgacaggttgatggacacccacaatctcaag
accaggcgggacaccgtcatggcagtctacctgctcctgagaagactaacagcagtggta
atgcaggtggctatgctgtactatggcagactgtttatccagcgaggtcagatgaccact
gggaacctggtctctttcatcctctaccagtctgacctggcagacaatatcaggactttg
atttacatttttggcgacatgctgaattcagtgggagcagctggtaaggtgtttgagtac
ctggacagagagccccaggtcagcaccaaggggaccctccaaccagagaccttgactgga
cacgtccagttccacaacctctccttctcctaccctacccgccaggaacgtaaagtactg
cagggcttctctctggagctgaggccgggtcagctgactgctctggtggggccatcagga
ggggggaagagcacctgtgtcagtctgctggagaggttctaccagcctcagcagggagag
atcctattggacggactgccactgcagagttaccagcaccactacctacacaggaagata
gccatggtaggccaggagcctgttctgttctctgggtccgtcaaggacaacattgcctac
ggcctggcagactgctctctggagagggtacaggaagctgctcgcagagccaacgcccac
agcttcatcagccaactggagaagggttacgacacagatgtaggagagcggggtggtcag
ctgtccggcggtgagaagcagcgtatcgccatcgccagagctctgatcagagagccacag
gtcctcatcctggacgaggtcaccagcgcactggacacggagagcgaacacatggtccag
gaggccctggctagctgcccctcccagaccctgctggtgatcgctcacaggctgaagacc
attgagagggcagatcagatcattctgattgaccaggggactgtacaggagcagggcact
caccaggagttgatggacaggaaggggagctactacaaactaaaagagagactcttcacc
gaagacgacgtgccacattga
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