Oncorhynchus kisutch (coho salmon): 109908216
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Entry
109908216 CDS
T09179
Name
(RefSeq) integrin alpha-5-like
KO
K06484
integrin alpha 5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03266
Virion - Herpesvirus
oki04145
Phagosome
oki04510
Focal adhesion
oki04512
ECM-receptor interaction
oki04517
IgSF CAM signaling
oki04518
Integrin signaling
oki04810
Regulation of actin cytoskeleton
oki04820
Cytoskeleton in muscle cells
oki05100
Bacterial invasion of epithelial cells
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
109908216
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109908216
04517 IgSF CAM signaling
109908216
04518 Integrin signaling
109908216
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109908216
09144 Cellular community - eukaryotes
04510 Focal adhesion
109908216
09142 Cell motility
04820 Cytoskeleton in muscle cells
109908216
04810 Regulation of actin cytoskeleton
109908216
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109908216
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
109908216
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109908216
04515 Cell adhesion molecules [BR:
oki04515
]
109908216
04090 CD molecules [BR:
oki04090
]
109908216
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109908216
Cell adhesion molecules [BR:
oki04515
]
Integrins
Integrin alpha subunits
109908216
CD molecules [BR:
oki04090
]
Proteins
109908216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
Tudor_3
Motif
Other DBs
NCBI-GeneID:
109908216
NCBI-ProteinID:
XP_031650343
Ensembl:
ENSOKIG00005019139
UniProt:
A0A8C7GMY1
LinkDB
All DBs
Position
LG17:69550136..69636519
Genome browser
AA seq
1054 aa
AA seq
DB search
MGSKRYHSKTPGKLNYSLFCIGVCLIILLPLCDTFNLDVENPSVYSGPNGSYFGYSVEFY
LTNSSSVSVVIGAPKANTSQFNITEGGSVYFCPWSLGQSECHNIEFDNQGDRIVTVSGTD
YQAEVKSHQWFGATIRSHGDTILACAPLYSWRTKAEKPQSDTTGTCYLSVKNFTKFVEYA
PCRTEFINQGGQGYCQGGFSADFTKDGKVVLGGPGSFFWQGQVISAAKEEIIKAYYPGYF
MQSVEGQTQTRQAQIKYDDSYHGYSVAVGEFSGDDVEDVVAGVPKGVMLYGLVSVLNGTD
LKSMLNYTGEQMGSYFGYTVSTADINNDGMSDLLVGAPMYMTRGSDGRLEEVGRVYLYLQ
RGPLDLEPTLNLTGTQVFGRFGSTIAPLGDLNLDGYNDLAISCPFGGEDQQGLVLIYNGF
AGGLRNTPSQVIAGQWASGTVPASFGFSLRGAKDQDMNGYPDLIVGAFGVDKAILYRSRP
IVNTSASLTVYPTMINPEEKSCSVNNGNTTITVSCVNLSFCLSANGKYLPDNLGFLVEVQ
LDHLKHMQKGGVKRALFVDSQQAMLQRSVRVRSGERVCHETKIYLRDDKEFRDKLSSIYI
SLNFSLDPQAAFDSHGLRPILNYKTTELIEQKAQILLDCGEDNICVPDLKLAVHGDRKEV
YLGDDNLLTLTFNARNEGEGGAYEAELYVVLPPEADYSGIARNNESLTQLTCSYEAENQT
RYLSCDLGNPMKSGTSLWAGLRFTVPRLKDTRKTVQFELQIRSKNENNSHSEVVPYKLEV
VVQADVILQGVSRPDKVFFPPLNWKVSKTPQEEQDIGPVIQHVYELVNKGPSGISHTVLQ
LSCPLSVQGQGLLYPLEMSTEGPLNCTTNHSINYLQLKLQQTSTEQPPLLVPGQDHHIER
REVQRDQLAEHTNLSCSNVECWTLQCDVGLLEKGTSAILKLRSRIWAETFIERAYKGYVL
ECLARFSVVKMPYAILPKEVPSGSKKVVTPLVWNKQDSQYSVPLWIIILAILAGLLLLAL
LIYVLYKLGFFKRSLPYGTAMEKAQLKPQAASEA
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgggttccaaaagataccattcgaagacaccgggaaaactgaactactcattattctgc
attggggtttgtctaataattctgctaccgttgtgtgatacattcaatttggacgtggag
aacccttctgtctacagcggacctaatgggagctactttggatattccgtggaattttac
ttgactaattcttcaagcgtcagtgtagtgattggcgctcccaaggccaataccagtcag
ttcaacatcacagagggcgggtctgtgtacttctgcccatggagtctcggccaatctgag
tgccacaacattgaatttgacaatcaaggggaccgcatagtcactgtcagtggcacagac
taccaggctgaagtcaagtcccaccagtggttcggcgccaccatccgttcccacggagac
accattctggcctgtgcccccctctactcctggagaaccaaagcagaaaagccccagtca
gataccacgggaacctgctacctctctgtcaagaacttcaccaagtttgtggaatatgct
ccctgtcgcacagaattcattaaccagggtggtcagggctactgtcaggggggattcagt
gctgatttcacgaaggatgggaaagtggtgcttggaggaccaggcagcttcttctggcaa
ggtcaggtgatctcagcagccaaagaggagataatcaaggcctactatccagggtacttc
atgcagtctgtggagggacagacccagaccagacaggctcagatcaaatatgacgacagc
taccacggttactctgttgcagttggggaattcagtggagatgacgtggaagatgttgtg
gctggggtcccaaaaggggtcatgctctatggtttggtgtctgttttaaatggcactgat
ctgaagtccatgctcaactacactggcgaacagatgggctcctattttgggtatactgtg
tccacagccgacatcaataacgacggcatgtctgacctgttggtgggagctcccatgtac
atgacccgagggtcagacggccgtctggaggaggtgggacgtgtgtacctctatctgcag
cgtggaccactggacctggagccaactctcaacctgaccgggacccaggtgtttgggagg
tttggcagcaccatcgcacctctgggagacctcaacctggacggatacaatgacttggcc
atcagctgtcctttcggtggagaggaccagcagggattggttctcatctacaacggattc
gccggtgggctcaggaacacaccctctcaggtcatagctggccaatgggcttcaggcaca
gtgccggccagctttggattctcactccgaggtgctaaggatcaggacatgaatggctac
ccagatcttattgttggtgctttcggagttgacaaggcgattttgtacagatcccggccc
atcgtcaacaccagtgcctccctgaccgtctatcccacaatgatcaaccccgaggagaag
agttgttcagtcaacaacggcaacaccaccataactgtctcctgtgtcaacctgagtttc
tgcctctctgccaatgggaagtacctaccagacaacctaggcttcctggtagaggtgcag
ttggaccatctgaaacacatgcagaagggaggggtgaagagggctctgtttgtagactcc
cagcaggcaatgcttcagaggagtgtgagagtgcggagcggagagcgtgtgtgtcacgag
accaagatctacctgagggatgacaaggagttcagagataagctctcctccatctacatc
tccctcaacttcagtctggatcctcaggcagcgtttgactcccacggcctaagacccatc
cttaactacaagaccaccgagctcatcgagcagaaggcccagattctgctggactgtgga
gaagacaacatctgtgttcccgacttaaagctggcggtgcacggggacaggaaggaagtg
tacctaggtgacgacaacttgctgaccttgactttcaacgcgcggaacgagggtgaaggt
ggggcctatgaggctgaactgtatgtggtgttacctcctgaagcagactacagcggtata
gctcgcaataacgagagcctgacccagctgacctgtagctacgaggctgagaaccagacc
cgctacctcagctgtgacctgggcaatcccatgaagtctggcaccagcctgtgggcaggc
ctgcgtttcactgtgccacgactgaaggacacacgcaagacggttcagtttgagctgcag
atccgcagtaaaaatgagaataattcccacagtgaggtggtgccctacaagctggaggtg
gttgtccaggccgatgttattttacagggtgtctcccggccagacaaggtcttcttccct
cccctcaactggaaggtctccaagaccccccaggaggagcaggacattgggcctgtaatc
caacacgtctatgaactggtgaacaaaggtcccagtgggatcagccacacagtgctgcag
ctcagctgtcctctcagtgttcagggccagggtctcctctacccgctggagatgtctact
gagggacccctcaactgcaccaccaaccactccatcaactacctgcagctcaagctccag
cagacttccacagagcagccgcccctacttgtgcctggtcaggatcaccacatcgagagg
agagaagtccagagagaccagctggcagagcacactaacctgtcctgctctaacgtggag
tgctggacactgcagtgtgacgtgggtcttctggagaaggggaccagcgccatcctcaaa
ttgcgctcccgcatctgggctgagaccttcatcgagagggcatacaaggggtacgtgttg
gagtgcctggcaaggttcagtgtggtcaagatgccctatgccatcttgcccaaggaggta
ccgagtggatctaaaaaggtggtgaccccgttggtgtggaacaaacaagacagccaatac
tctgtgcccttgtggatcatcattctggccatactggctgggcttctgctgctggcactg
ctcatctacgtcctgtacaaacttggcttcttcaaaaggtcgctaccctacggcacggct
atggagaaggcccaactcaagccccaggctgcgtctgaggcctaa
DBGET
integrated database retrieval system