Oncorhynchus kisutch (coho salmon): 116360606
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Entry
116360606 CDS
T09179
Name
(RefSeq) nuclear pore complex protein Nup50-like isoform X1
KO
K14295
nuclear pore complex protein Nup50
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116360606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
116360606
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116360606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
116360606
NCBI-ProteinID:
XP_031671398
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MAKRIADKELTDRNWDQEDEGEECCDGVHQAGTFSIASDDVMKSRPIKKAKRRAAGSEGQ
SGGAFKVFKGFSLAPTSGTGPAAEGITAFSGFGNGVGFKPLSGLSNGNSVKPVTPALTGF
TSPTATKTTTPGSLTFSGPSSAVITGQQSNGSSPAVSSRSLSSSLFSNSGNNQEYSRQLT
ALNCSVRDWITKHVNGNPLCDLNPIFRDYEKHLASIDKKYGGSGGTGAVAGAAVVADGGS
ESRSRAEEPVEKRAASTPPPPSSSAAAPTATVPVFSFSKDKDGSATAPGDSSAAPIPAGI
SFSLGQKGDSSAAPIPAGISFSLGQKGNSSVLGSLSTGGAPSVSSSSLFGGAAPPAFSFS
GAKAEAAPTQTTDENGEESDEPPKVEVQEIKETDAFYSKKCKLFYKKETEFKEKGVGTLH
LKTTSDGKTQLLVRADTNLGNILLNIMVQPSILCSRMGKNNVMVMCVPNPVVDHNNPTNP
VAMLIRVKTAEDADELHNILEEKTA
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaggattgccgacaaagagctgactgaccggaactgggatcaggaggatgag
ggagaggagtgttgtgatggtgttcatcaggcagggacattttccatcgctagtgatgat
gtgatgaagagccggcccatcaagaaggccaagcgtcgtgctgctggttcagaggggcag
agtggaggagcattcaaagtgtttaaagggttctccctggcccctacatcgggaaccggg
ccagccgctgaggggatcacagccttctccgggttcgggaatggggtagggtttaaaccc
ctgtctgggctgtccaatgggaacagtgtcaaacctgtcactccagccctcaccgggttc
acctcgcctactgccaccaagaccaccacaccaggttcattaacattcagcggcccctcc
agtgctgtcatcacagggcagcagtctaatggttcctcccccgcggtttccagtcggtct
ctcagctcctctctcttctctaacagcggtaacaaccaggaatacagtaggcagctcaca
gctctcaactgctctgtcagggactggatcaccaagcacgtcaacggaaaccccctctgt
gacctaaaccccatcttcagggactatgaaaagcacctggccagcatcgataagaagtac
ggagggagtggagggactggagctgtggctggagctgctgtggtggcggacggaggctca
gagagcaggagcagagcagaggaaccagtggagaagcgggcagccagtacaccaccacca
ccctcctctagcgccgccgccccgaccgccacggtgccggtgttctccttcagtaaggac
aaggacggcagcgctacggccccgggggacagctcagccgctccgatccccgctggcatc
agctttagcttgggccagaagggggacagctcagccgctccgatccccgctggcatcagc
tttagcttgggccagaaggggaacagctcagtgttggggtctctgagcaccggaggagct
cctagtgtctcctcctcctccctgtttggaggcgctgctcctcctgccttctccttcagt
ggggccaaagcggaggctgcccccacccagacaacagatgaaaacggggaggagtcggat
gaacctcccaaagtggaagtccaggagattaaggagactgacgcgttctactccaaaaag
tgtaaactgttctataagaaagagacggagttcaaggaaaagggagttggaacgctgcat
ctgaaaaccacctcagacggaaagacacagctgctagtccgcgctgacaccaacctgggt
aacatcctgttgaacatcatggtccagccctccatactctgttccaggatgggaaagaac
aacgtgatggtgatgtgtgttcctaaccctgtcgtggaccacaacaaccctaccaaccct
gtcgccatgctcatcagggtcaaaacagcagaggacgctgatgaactgcacaacatactg
gaggagaagacagcttag
DBGET
integrated database retrieval system
