KEGG   Oryzias latipes (Japanese medaka): 101155110
Entry
101155110         CDS       T02443                                 
Name
(RefSeq) lysine-specific demethylase 5B-B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ola01009]
    101155110
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ola03036]
    101155110
Enzymes [BR:ola01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     101155110
Protein phosphatases and associated proteins [BR:ola01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     101155110
Chromosome and associated proteins [BR:ola03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    101155110
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID PHD zf-C5HC2 JmjN PHDvar_NSD zf-PHD-like PHD-1st_NSD
Other DBs
NCBI-GeneID: 101155110
NCBI-ProteinID: XP_011475815
LinkDB
Position
7:complement(21800063..21819128)
AA seq 1546 aa
MSSPSFHRVETGSQPRPDEFKPPPECPVFEPSWEEFRDPYAFINKIRPIAEKTGICKVRP
PPDWQPPFACDVDKLHFVPRIQRLNELEAQTRVKLNFLDKIAKFWDLQGCSLKIPHVERK
ILDLYKLYKLVADEGGFEIVCQDRRWTKIALQMGYSPGKAIGSHLRGHYERILYPYTLFQ
NGANLLAPDLASKLMRLEADPELEQCVQKPVPQEETVDNKEHKLQEQAQRLPPPMTDTCP
SARRAKRMKCEITCVKTEPGEAGENKPNLRRRMGSFVAKPEPEKEIPISVKQEPLESKEP
ISEDDKSKSRYKKMIPLVTSNPVDLVVCLVCASGGDEDRLLLCDGCDDSYHTYCLIPPLH
DVPRGDWRCPKCLAQECSKPHEAFGFEQASRDYSLRAFGQMADAFKSDYFNMPVHMVPTE
LVEKEFWRLVGAIDEDVTVEYGADIASKEFGSGFPIPNGKFKVSPADEKYLKCGWNLNNL
AMMNPSVLTHVTADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPG
FAAEQLESVMKKLAPELFESQPDLLHQLVTIMNPNTLMAYGVPIYRTNQCAGEFVITFPR
AYHSGFNQGFNFAEAVNFCTVDWMPLGRQCVDHYRMLHRYNVFSHDEMVCNMAAKADTLN
MVLASAVHKDMVFMIQEERELREKAKKMGVLDFKEAKYDHLQDDERQCAKCRTTCYLSAI
TCPCSPGVLVCLYHIGDLCSCPVTNYTLNYRYTLDELYPMMSAVKQRAELYDEWACRVTE
TLEAKLEKKKGLPVFRSLLSESESKLFPDNDLRRRLRLVTQDAEKCASVAQQLLNGKKQT
RYRCGSGKSRSQLTVEELSSFVRQLYNLCCSLPQAPMLKELLNRIEDFQQHSEKVLAEES
LSVAEIQSLLDVSFDFDVDLPELPKLRVRLEQARWLEAVQQAATQPATLTLETMRMLIDQ
GVGLAPHSSVEKAMARLQEQLTMSEHWEDKASSLLKARPPHSIETLSAAAEKASGIPAYL
PNCLLLKDTIRKASEWLQEADELQTSGCVLMVDSLSDMVLRGQAIQVHLEPLDQLETLLV
AVQEWKESAAAAFLQKDLTKNLLEVLCPRLEAAGLFKRKARKGKDAMKSNKKKTARLNTI
SDVEKSLLGTKDPTSAVATLEELRVREMETFYNLRAANESKLLPTADCMDLKVCFCQKAP
MGAMLQCELCRDAFHSVCVRDSSGSCDTQPWLCPHCQRSEKLPLSKVLSLLESLQRIGVR
LPEGDALGYLVERTHNWQERAQQVLCKLPELEERPRTPPTLTHWVSGCENDPKNTQAPSL
TPEWNRTSHAQTVFYTEQRCIPLQGLSPELEGLMVEGLLLQVCLPQVQSLYHFLLDRASS
QQAKRCRSPLLEEPTDRDKHMQFISQGTNVSLNQDGTGSSKEAGSERKIKRHLEKEGLDA
EHRGKDRKHSHKRQKMTKKKSQRRSASTSSSPRSDFSQSEDSDEEMAVCPAEDCQLPEGD
EVDWVQCDGSCNQWFHQVCVGVTPEMAEKEDYVCVTCTLKDGHMRK
NT seq 4641 nt   +upstreamnt  +downstreamnt
atgtccagtccgagcttccaccgggtcgaaactggaagccagcctcgaccggacgagttt
aagcctcctccggagtgcccggtcttcgagcccagctgggaagaatttcgagatccttat
gcgtttatcaataagatccgccccatcgctgagaaaacggggatttgtaaagtccgacca
cccccggactggcagcctccatttgcttgtgatgttgacaaactgcattttgttcctcgt
attcagaggctcaatgagctggaggcacaaaccagagtcaagctcaacttcttggacaag
attgccaaattttgggatctgcagggatgttccctgaagattcctcatgtagagcggaag
attctggatctgtataagctgtataagctggtagcagatgaggggggattcgaaattgtc
tgccaggatcggcgatggaccaagattgctctgcagatgggctactcacccggcaaagcc
atcgggtcgcacctgcgggggcactatgagaggatcctctatccctacaccctgtttcag
aacggcgccaacctactggcaccagatctggcttccaaactgatgcgtttggaggctgat
cctgaacttgaacagtgcgttcagaagcctgtcccacaagaggagactgtcgacaacaag
gagcacaagctgcaggaacaggctcagaggctgcccccccccatgactgacacttgcccc
agtgcgcgccgagccaagcgcatgaagtgtgagatcacctgtgtgaagacggaaccaggt
gaggccggggaaaacaaacccaatttgaggcgtaggatgggctcttttgtcgccaaacca
gaaccagaaaaagagattcctatctcagtgaagcaggaaccgctggaaagtaaagaacca
atcagtgaagatgacaaatccaagtcacggtacaagaagatgatccccctggttacttca
aatccagtggatctggttgtgtgtctggtttgtgccagtgggggagacgaggaccgcctg
ttgctgtgtgacggctgtgacgacagctaccacacctactgtctgattccccccctccac
gacgttcccagaggagactggaggtgccccaagtgtctggctcaggagtgcagcaaacct
catgaggcgtttgggttcgaacaagcctccagagattactccctccgagcttttggacaa
atggctgatgcattcaaatcagattattttaatatgccagttcatatggtacccacagag
ctggtggagaaagagttttggcgtctggttggagccatcgatgaggacgttaccgttgaa
tatggagcagatattgcctcgaaggagtttgggagtggattccccattcccaacgggaaa
tttaaggtttccccagcagatgagaaatacctcaaatgtggctggaacctcaacaacctg
gcaatgatgaacccgtctgtgttgactcacgtaacggctgacatctgtgggatgacactg
ccgtggctttatgtgggcatgtgcttttcctccttctgctggcacatcgaggatcactgg
agctactccatcaactacctgcactggggggaacccaaaacctggtacggagcgcctggt
tttgctgcagagcagctggagagtgtgatgaagaaactggctccagagctgttcgagtcc
cagcctgacctgctgcaccagctggtcaccatcatgaaccccaacaccctgatggcctac
ggagtcccaatttacagaacaaaccagtgtgctggagagtttgtcatcacgtttcctaga
gcgtatcacagcggcttcaaccaaggctttaactttgccgaggcggtcaacttctgcact
gtagactggatgccacttggccgacagtgtgtggaccactaccgcatgctgcaccgctac
aacgtgttctcccacgatgagatggtttgcaacatggccgccaaagcagacacgctcaac
atggtcctggcctcagccgtccacaaagacatggtcttcatgatccaagaggagcgggaa
ctgagagagaaagcgaagaaaatgggcgtcttggacttcaaagaggcaaagtacgatcac
ctccaggatgacgagcggcagtgtgccaagtgcaggaccacctgctacctttctgccatc
acctgcccctgcagccctggagttctggtctgtttgtaccacatcggtgacctctgcagc
tgccccgtcaccaactacacactcaattacagatacacgctggatgagctgtaccccatg
atgagtgctgtcaagcagagagctgagctgtacgatgaatgggcctgtcgtgtgacagag
actctggaagctaagctagaaaagaagaaaggcctgcccgtctttcgctctttactctct
gagtccgagtccaagctgttccctgacaacgacctgcggcggcggttgcgtctcgtcaca
caggatgcagagaagtgcgcctcagtggctcaacagctgctaaacggcaagaaacagacc
aggtatcgatgtggaagtgggaagtcacgcagccagttgactgtggaggagctcagttcc
tttgtgaggcagctgtataacctgtgctgcagcctccctcaggcccccatgctgaaggaa
ctcttgaatcgcatcgaagacttccagcagcacagcgagaaggtcttggcagaggaatct
ctcagcgtggccgagatccagagcctgttagacgtcagcttcgactttgacgtggatctg
ccagagctgcccaaactcagagtgaggctggagcaggcgcggtggctggaggcggtgcag
caggccgccacccagcccgccaccctcactctggagaccatgaggatgctcattgaccag
ggagtgggcctggcaccccactcgtctgtggaaaaagccatggcacgtcttcaggagcag
ctcaccatgtcagagcactgggaggacaaagcgagcagcctccttaaggcgagacccccc
cactccatagagactcttagcgctgctgctgaaaaagcatctggaatccccgcctacctc
ccaaactgtctcctcctgaaggacaccatcagaaaagccagcgagtggcttcaggaggcc
gacgagcttcagaccagtggctgtgtgctgatggtggacagcctctctgacatggtgtta
cggggacaagccattcaggtccacctggagcctttggaccagctggagactttgttggta
gctgtgcaggagtggaaggaatctgctgcagccgctttccttcagaaggacttaaccaag
aacttactggaggttctgtgtccccggcttgaggctgcaggtcttttcaagaggaaggcc
aggaaaggaaaagacgcgatgaaaagtaacaaaaagaaaacggcgcggctcaacaccatc
agcgacgtggagaaaagtcttttggggaccaaagatcctacctctgcagtggcgactctg
gaggagctgcgtgtgagggagatggaaaccttctataatctcagggcagcaaatgaatca
aagctccttcccacagcagactgtatggacctgaaggtgtgcttctgccagaaggctccc
atgggcgccatgctgcagtgtgagctctgcagggacgccttccacagcgtttgcgtcagg
gactcgtcgggctcctgcgacacccagccgtggctctgcccgcactgccagcgctcagag
aagcttccgctcagcaaagtgctctctctgctggaatccctacagcgcattggggtgcgc
ctgccagaaggcgatgcacttggatatctggtggagaggacacacaactggcaggagcga
gcgcagcaggtcttgtgtaagctaccagagctggaggagaggcctagaactcctcccact
ctaacccattgggtgtcaggctgtgaaaacgatcccaaaaacactcaggctccttctttg
actccagagtggaacaggacaagccatgctcagaccgtcttctacacggagcagagatgc
atccccctgcagggcctgagcccagagctggagggtttgatggtggaagggctgctgctg
caggtgtgcctgccccaagtccagagcctctatcattttttactggacagagccagcagc
cagcaagccaagagatgcagatcgcccctcctggaggaacccacggaccgcgacaaacac
atgcagtttatctctcagggaacaaacgtgtcgctcaaccaggatggtaccggcagctcc
aaagaagctggttctgagaggaaaataaagaggcatctggagaaggagggtttggatgca
gaacacagggggaaggacagaaagcactctcacaaaagacagaagatgactaaaaagaag
tctcagcgcaggtcggcttcaacgtcatcctctccacgctccgacttctcccagtccgag
gactcggatgaggagatggctgtgtgtccagcggaggactgtcagttaccagaaggagac
gaggtggactgggtccagtgtgatggcagctgcaaccagtggttccaccaggtgtgcgtt
ggggtgacgccggagatggccgagaaggaggactacgtttgtgtcacttgtacactgaag
gacggacacatgagaaaatga

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