Oryzias latipes (Japanese medaka): 101160376
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Entry
101160376 CDS
T02443
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1-like isoform X1
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04080
Neuroactive ligand-receptor interaction
ola04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101160376
04082 Neuroactive ligand signaling
101160376
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ola04040
]
101160376
Ion channels [BR:
ola04040
]
Ligand-gated channels
GABA-A
101160376
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
101160376
NCBI-ProteinID:
XP_023809014
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Position
24:complement(20218295..20242868)
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AA seq
522 aa
AA seq
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MHTDVVLLAALLGVLGASCAHKPTRGQKLEPQRHIRTYPKVTTQASKELQDSPVLPLDAA
PPLNDPPQSRITPKPAASVQVNPSYRSKRELSLAEGFYDRIGSTVVKRSPDVTKVWGRKS
EQLLRIDDHDFTMRPGFGGPAVPVGVDVQVESLDAISEVDMDFTMTLYLRHYWKDERLSF
KSNTNQSMTFDGRLVKKIWVPDMFFVHSKKSFTHDTTKDNVMLRVYPDGKVLYSLRVTVT
AMCSMDLSRFPLDTQTCSLEIESYAYTDDDLMLYWKEGNRSLNTDERISLSQFLIQEFHT
TTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVP
LGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAVNYLSTLQERK
ERKLREKLPCTCGMAHPGLMSASYSEVDVNTTGNYGMPEENGVRRERILAELVMENDQVT
GHVGSRAYSDVWIDTHAIDKYSRVIFPGSYILFNIIYWTIYS
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgcacacggacgtggtgctgctcgccgcgctgctgggggtgctcggcgcgtcctgcgcc
cacaagccgaccagagggcagaagctggagccgcaaagacacatcaggacataccctaag
gtgaccacacaggcctcaaaggaactgcaagactcacccgtactcccgttagatgcagcc
cctcctctgaatgaccctccacagagccggataaccccaaaaccagcagcatctgtgcag
gtcaacccctcatacagatcaaaacgtgaattgtctttagcagaaggattctatgacagg
attggcagcaccgtcgtcaagagaagcccagatgtcactaaagtgtggggcagaaagtca
gaacagctgctgaggatagatgaccatgacttcacaatgcgaccaggatttggaggacct
gctgttccagttggagtggatgttcaggttgaaagcctggatgcgatttcagaagttgac
atggacttcacaatgactctgtacttgaggcactactggaaagatgagcgcctgtctttt
aaaagcaacaccaaccagagtatgacttttgatggccgcctggtgaagaagatttgggtt
ccggacatgttctttgttcactctaagaagtccttcacacatgacaccaccaaggacaac
gtcatgctgagagtttatcccgatggaaaggttctctacagtctcagagtaaccgtcacc
gccatgtgcagcatggacctcagccgttttcctctcgacacccaaacgtgctctttggag
attgaaagctatgcctacacagatgatgatttaatgttgtactggaaggaagggaacagg
tccttaaacacagatgagaggatctctctctcccagtttctcattcaggagtttcataca
accacaaagcttgccttctacagcagcacaggctggtacaaccgtctgtacatcaacttc
actctgcggcggcacatcttcttcttcctgctgcagacgtacttccctgccaccctcatg
gtcatgctgtcctgggtgtcattctggatcgaccgccgggccgtcccagccagagtcccg
cttggcataaccacggtgctcaccatgtccaccatcatcactggagtcaacgcctctatg
cccagagtgtcctacatcaaagctgtggacatttacctctgggtcagcttcgtctttgtc
ttcctctcggtgatagagtacgctgctgtcaactacctgtccactctgcaggagcggaaa
gagagaaaattgcgtgagaagctgccgtgtacctgtggaatggcccaccccgggttgatg
tccgccagctacagtgaggtggacgtcaacaccaccggaaactacggcatgccagaagag
aacggcgtcagacgggaaaggattctggctgaactggtaatggagaacgaccaggtgacc
ggccacgtcggctctagggcctacagcgacgtctggatcgacacgcacgccatagacaag
tactcccgggtcatcttcccaggatcctacatcctctttaacatcatctactggaccatc
tactcctaa
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