Oryzias latipes (Japanese medaka): 101162268
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Entry
101162268 CDS
T02443
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3 isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
101162268
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ola04040
]
101162268
Ion channels [BR:
ola04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
101162268
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
101162268
NCBI-ProteinID:
XP_023809530
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All DBs
Position
3:37479304..37525032
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AA seq
1285 aa
AA seq
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MLNWVVKVVPQPPEPPSKIAEGPKGGKQSAAPPVAEAPPPPPQEKKVKFQDECKNEASKA
ENSKQENQAAAGNGPAPGVLTWISSSLPHPAASPSLNRAIPAHSTKEETAALSRPEEEKG
MMAWISQGLEKVVPQPELKSKEPTAAEQPQVRQTAPPAESQVTAKEAETDQSEKLGPPRM
MEWIKHGIEKVVPHPESHCKTETNEKTEAKVIKVPASAPKPPSETELTNEAEQQPNMMGW
IVSGIGRMLPQPVLKPDAGSDEVQTISIIQKNTDLLLEDVEEDEAKKGKEEPKPRSNQPP
SKKMDDAETQVDQLTPLVDSIKREAGEVVLAHMEERLQQERLEAARVAEEMARKAAEEAV
RQLEVEQSAKIVIETLPEPNDQLPNILEEDNEDEPELQNLQEDSEGSQNKNSEENKIQEE
DKIMDLCLVDICPADDDGRALTQAHKAGCAPPTEAEDQVAPSSTDVEPASESRDLESPVT
QQPEPQPAEAPPSTTEKISAAEPAEQAGCGESCSKGVAEAPLLTVEDVDQKVVNGRTLNI
PQIITTPEPEADTLAIPEYSSMADPSTDEEDEELLKVGLKAWSTQGELLAADEEMRPQSA
TSIGSVVVQERLNELVSLFKGRTERQKDRLLDPDESEEESPTASPAKAPPAPPPPPPPGE
GKKEDTSAAAEEEEVEPFQFEILGHPLKLPQLPKLPPMPDWLRAILDYRFPSSIDPFTDL
IYVIWLFCVVAAWNWNVWLIPVRWAFPYQTSENIHLWLLADYTCDFIYILDMVIFQPRLQ
FVRGGDIVCDKKDMRENYMTTERFKMDVISLFPMEIFYVFTGVNSLLRFPRLLKYMVFFE
FNDRMEAVMKKAYIYRVIRTSTYLLYSLHINACLFYWGSDYEGLGSTKWVYDGKGNAYIR
CYYFAVKTLITIGGLPDPTTVFEICFQLINYFVGVFAFSIMIGQMRDVVGAATAGENYYR
ACMDSTVKYMNSYNIPREVQNRIKTWYDYTWKSQGMLDEQELLVQLPAKMRLDIAVDVNY
SIVSKVALFQGCDRQMVFDLLTRLKSVVYLPGDFVCKKGEIGREMYIIKQGEVQVVGGPD
LQTVFVTIRAGSVFGEISLLAGGGGNRRTANVKAHGFANLFILDKKDLAEILVHYPESQK
LLRKKAKTMLTKDKKPEEKRPSKATVEVIPPRPDTPKLFKAALKVTEQAGIEGTFAKLKK
AYRASESAGEHAEDRTSVSPLPPPSPMHRRSPIPRSCPREDGDDSVAETADSSVIIRMTP
RREGEELLTVEVAPKEGEKEEKTEK
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgttaaactgggttgtcaaagtcgtaccccaaccacctgagccgccgtccaaaatcgca
gagggtccgaagggcggcaaacaaagtgctgccccccctgtcgccgaagctccgcctcct
cctcctcaggagaagaaagtgaagtttcaagatgaatgcaaaaacgaagcttcaaaggct
gagaattcaaagcaggagaaccaagcagcggcaggaaacggtcctgcgcctggcgtgctg
acctggatcagcagctctcttccacatcctgcagcctcaccaagcctgaacagagcaatc
cccgcccactccaccaaggaggagactgcagcgctcagtagacctgaagaagaaaagggg
atgatggcctggatctctcagggcttggagaaggtcgttcctcagcctgagctgaagagc
aaagagcccacggcagcggagcagcctcaggtgcgtcagacagcgcctcctgcagaatct
caggtcacagcgaaggaggcggagacagaccaaagtgagaagttaggcccgcccaggatg
atggagtggatcaaacatggaatcgagaaggtggttcctcatccggagagtcactgcaag
acggagaccaacgagaaaactgaagctaaagtgataaaagttcctgcttcggctccaaaa
cctccctcagagacagagctcaccaatgaagcagagcagcagccaaatatgatgggctgg
atcgtcagtgggatcggccgcatgctgcctcagccagtcctgaagccggacgcaggaagt
gacgaggtgcagacgatcagcatcattcagaagaacacagacctgctgctcgaggacgtg
gaagaagatgaagccaagaaggggaaagaagagcccaaaccgagaagcaatcagccgccg
tccaaaaagatggacgatgcagagacgcaggtggatcagctgactcctctggtggacagc
atcaagagagaagctggggaggtggtcctcgctcatatggaggagaggctgcagcaggag
cgtctggaggcagctcgagttgcagaggagatggccaggaaagcagctgaagaggccgtt
cgacagctggaagtcgagcaatcggcaaagattgtcattgaaacacttccagagcccaat
gaccagttgcccaacatcctggaggaagacaatgaagatgaaccagagcttcaaaacctg
caggaggacagtgaaggaagccaaaacaaaaattcagaggaaaataaaattcaggaggag
gataaaatcatggatctatgcttggtggacatctgcccggctgatgatgatggtagagct
ctgactcaggcgcataaggcaggatgtgccccgcccactgaagcagaagaccaagtcgcc
ccttcctctacagatgtggagccagcatctgaaagcagagacctcgagagtcccgtcacc
caacagccagagccccagcctgcagaagcccctccctctaccactgagaagatcagcgca
gcagagcctgcagaacaagctggatgtggagagagctgcagcaaaggtgtggctgaggct
ccgctgctcacagtggaagatgtggatcagaaagtggtgaatggacgcaccctgaacatc
ccccaaattatcaccacgccagagccggaagcagacaccctggcaatcccagaatacagc
agcatggccgacccatccacagacgaggaagacgaggagctgctgaaggtcggcctgaag
gcctggtccactcagggagagctgctggcggcagacgaagagatgcgacctcagtccgcc
accagcatcggcagcgtggtggtgcaggagcgtctcaacgagctcgtctctctcttcaaa
ggtcggacagagcggcagaaagaccgcctgttggacccggacgaatccgaggaggagagt
ccaaccgcctctccagcaaaagcacctcctgctcctcctccacctcctcccccaggagag
gggaagaaggaagacacctcggcagcagcagaggaagaggaggtggaaccattccagttt
gaaattttgggacatcccttgaaactcccccaacttcccaaacttcccccgatgccagac
tggctgagagccatcctggactaccgcttcccgtccagcatcgacccattcaccgatctg
atctacgtgatctggctcttctgcgtggtggcagcctggaactggaacgtgtggttgatc
cctgtccggtgggcgtttccctaccagacatcggagaatatccatctgtggctgctggcc
gactacacctgcgacttcatctacatcctggacatggtcattttccagccgaggctgcag
tttgtccgtggaggagacatcgtgtgcgacaaaaaagacatgagagaaaactacatgact
actgagaggttcaagatggacgtcatcagtctgttccccatggagatcttttacgtcttc
accggcgtgaactctctgctgcggttcccacgtctgctgaagtacatggtcttctttgag
ttcaacgacaggatggaggcagtgatgaagaaggcgtacatctacagagtgattcggacc
tccacctacctgctgtactcgctgcacatcaacgcctgccttttctactggggctccgac
tatgaaggactgggctccaccaagtgggtctacgacggaaaaggaaacgcttacatccgc
tgttactacttcgctgtgaagaccctgatcaccatcggaggtctgcctgaccccaccacc
gtctttgagatctgcttccagctcatcaactattttgttggggtcttcgcgttctccatc
atgattggtcagatgagggatgttgtaggagcggcaacagctggcgagaactactaccgg
gcctgcatggacagcaccgtcaagtacatgaactcctacaacattcccagagaagtccag
aaccggatcaagacctggtacgactacacctggaaaagtcagggcatgctggatgagcag
gagctgctggtgcagcttccggccaagatgaggctggacatcgccgtggacgtcaactac
tccatcgtcagcaaagtcgccttgtttcagggctgtgacaggcagatggtgttcgacctg
ctcacgcggctgaagtccgtggtctacctgcccggagacttcgtctgtaagaagggggag
atcggcagggagatgtacatcatcaagcagggggaggtgcaagtagtgggcggccccgac
ctgcagacggtgttcgtcaccatccgggccggatccgtgttcggggagatcagcctgctg
gctgggggcggaggaaaccggcgtaccgccaacgtgaaggcgcatggatttgccaatctg
ttcatcctggataagaaggacctggcagagatcctggttcattaccccgagtcacagaaa
cttctgcgcaaaaaggccaagacgatgctgaccaaggacaagaagccagaggagaaaagg
cccagcaaagccacggtagaggtcatccccccccgaccggacacccccaaactgttcaaa
gcagctctgaaggtgacggagcaggcgggcatagagggaacctttgccaagctgaagaaa
gcctacagagcatctgagagcgccggtgaacacgcagaggaccgtacctctgtctctccg
ctgccgcccccgtctccgatgcatcgacggtctccaattcctcggagttgcccacgagag
gatggagacgattctgtggccgaaacggccgacagctctgtcatcatcaggatgacgcct
cgccgggaaggcgaggagcttcttacagtggaggtggctccgaaagaaggagagaaagag
gagaaaacagagaagtga
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