Oryzias latipes (Japanese medaka): 101163439
Help
Entry
101163439 CDS
T02443
Name
(RefSeq) PHD finger protein 1
KO
K11467
PHD finger protein 1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
101163439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101163439
03036 Chromosome and associated proteins [BR:
ola03036
]
101163439
Transcription factors [BR:
ola03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
101163439
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
101163439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_ash2p_like
PHD_2
Chromo
zf-RING_Vps41
ASH2L-like_WH
DUF4537
Motif
Other DBs
NCBI-GeneID:
101163439
NCBI-ProteinID:
XP_023820065
LinkDB
All DBs
Position
16:28771269..28798384
Genome browser
AA seq
534 aa
AA seq
DB search
MGGVSEGDDVLARWSDGLLYLGNVKRVDGVKQCCLVRFEDNSEFWVLRKDIHSFAAGGEE
VCCVCDAPPLKEPLINCLKCRHGYHLECHTPTIEPEADSDSWICRQCVFAVATKRGGALK
RGRFARLMQFMKLRLPYQLSSLDWDPQHLTNQQQCYCYCAGPGEWNLKMVQCGSCGQWFH
EACTQCLTKPLLYGDRFYQFQCSVCTKGPETIQRLPMTWVDLAHLVLYHLSLCCKRKYFD
FDHEILSFTNENWDSLLLGALSDTPRQDRFHNLLNALNSHKDRFVSGKEIKKKKCLFGLQ
VRAPPPLTSDTSPLITDPPVSITHRKSPLSLPCQRRVGGPESRKSKRRVMETQACPPPVP
ANSIELLPCCHGYMGGANLYNSRISEEDLNGSPSPKRMYALYHTAYSGNTALPTNFHHYN
SLEDNCRLPPSCLSYPLNSDGNHHHHHQQQQHYHSHQHQPGQKPLEPLILRDPPPCQAGA
GGAGGGGVGMGLDGGDGTVGRSWGGGEAVRILAKRITPDGKVQYLVEWENMSLY
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggggggagtcagtgagggagatgatgtgttggcacgatggagtgatggactcctgtac
ctcggaaacgtgaaaagagtggatggagtcaagcagtgctgtctggtgaggtttgaggac
aactctgagttctgggtgctcaggaaggacatccactccttcgctgccggaggggaagaa
gtttgctgcgtttgtgatgccccgcctctcaaagaaccgctcataaattgtcttaaatgc
cgccacggttatcatctggagtgccacacgccaaccatcgagccggaagctgacagcgat
tcttggatatgtcggcagtgtgtctttgcagtcgcaaccaagagaggcggggccctcaag
cgtggacgcttcgcccggctcatgcagttcatgaagctgcggctcccgtaccagctgtcg
tctctggactgggacccgcagcatctgaccaaccagcagcagtgttactgctattgtgcc
ggacccggagagtggaacctgaaaatggtgcagtgtggcagctgtggtcagtggttccat
gaggcgtgcacacagtgcctaaccaagccgctgctgtacggggacaggttttatcagttc
cagtgttcagtatgtacgaagggaccagagacgatccaaagacttcccatgacctgggtg
gatttggctcatttagtgctctaccatctctcactgtgctgcaagaggaaatactttgat
tttgaccacgagatcctgtccttcaccaatgagaattgggactcgttgcttctcggcgcg
ctgtctgacacaccaagacaggaccgtttccacaatctgcttaacgctctcaactcccac
aaggacaggtttgtctctggaaaagagatcaagaagaaaaagtgtcttttcgggctgcag
gtccgagccccacctccgctgacatcggatacgtcgcccctcattacagacccgcctgtc
agtatcacgcatcggaaaagcccattgtcactaccctgccaaagaagagtgggggggccg
gagtctcgtaaatcaaagcgtcgcgtgatggagacgcaggcctgtccacctcctgttcct
gccaactccattgagctactgccatgttgccatggctacatgggaggggccaacctttac
aactccaggatatcagaggaagacctcaacggaagcccttctccgaagcggatgtacgct
ctgtaccacaccgcttacagtggaaatactgcacttcccaccaacttccatcactacaac
agtttggaggacaactgccgtttacccccctcctgtttgtcctaccccctcaactccgat
ggcaaccaccaccaccaccaccagcagcagcagcactaccacagccaccaacaccagccg
gggcagaagcctctggagcccctcattttacgggacccgcctccttgtcaggctggtgcg
ggaggagcaggaggaggtggagttgggatgggactggatggaggggatgggactgttggc
agaagctggggagggggggaggcggtgaggatcttggcaaaacgcatcacaccagatggg
aaggtacagtacctggtggaatgggagaacatgagtttgtactga
DBGET
integrated database retrieval system
