Oryzias latipes (Japanese medaka): 101165756
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Entry
101165756 CDS
T02443
Symbol
ubr5
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5 isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101165756 (ubr5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101165756 (ubr5)
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
101165756 (ubr5)
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
HECT type E3
101165756 (ubr5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
PABP
zf-UBR
Motif
Other DBs
NCBI-GeneID:
101165756
NCBI-ProteinID:
XP_023819899
LinkDB
All DBs
Position
16:complement(6520222..6563901)
Genome browser
AA seq
2859 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKYSYNSHPHLNLLEQATLKQCVVGPNHAGF
LLEDGRVCRISFSVQPDRMELSKPDGSDGSKLSSGSGTGRSSRAGRTSDPPWFLSGSDTL
GRLAGNTLGSRWSSGVNGGSGGSGSGGGAGGGGAGGGSSGGGGSSGGGGGGGTSGRSSTA
ARDSRRQTRVIRTGRDRGSGLLGSQPQPVIPASVIPEELITQAQVVLQGKSRSVIIRELQ
RTNLDVNLAVNNLLSRDDEDGDDGDDTASESYLPGEDLMSLLDADIHSAHPSVIIDADAM
FSEDISYFGYPSFRRSSLSRLGSSRVLLLPLERDSELLRERESVLRLRERRWLDGASFDT
ERGSTSREGEPSLDKKSIPVQSPVSLGEELQWWPDKDGVKFVSIGAMFSELVAVSTKGEL
YQWKWSEPEPYRNPQNPSNHHPRASFLGLTNERITLLSANSIRATVATETNKVATWVDET
LSTVASKLEHSAQAFPELQGERMVSLHCCSLYTCAQLENSLYWWGVVPFSQRKKMLEKAR
AKNKKPKSSAGISSIPNITVGTQVCLRNNPLYHAGAVAFSVSAGIPKVGVLLESVWNMND
SCRFQLRSPESLKNMEKTTKTQEIKMESKPELVKTEMGPPPSPASTCSDTSSIASSASLP
YKRRRSTPAPKEEEKVNEEQWPLREVVFVEDVKNVPVGKVLKVDGAYVAVKFPGTSSSMN
NQNTTAPPDSDPSSLLQDCRLLRIDELQVVKTGGTPKVPDCFQRTPKKLCIPEKAEILAV
NVDSKGVHAVLKTGNWVRYCIFDLATGKAEQENNFPTSNLAFLGQSERNVAISTAGQESP
IVLRDGNGTIYPMAKDCMGGIRDPDWLDLPPISCLGMGVHSLANLPSNSTIKKKAAVIIM
AVEKQTLMQHVLRCDYEACRQYLVNLEQAVLLDQGGQALEALLGHRCDGNRNILHAAVSV
CFPVSNKETKEEEEAERSERNTFAERLSAVEAIANAISVVSSNSSGNRTGSSSSRGLRLR
EMMRRSLRAAGLGRHESGPSSSDHQDPVSPPIAPPSWVPDPPPMDPDGDIDFILAPAVGS
LTTASTGTSQGPSTSTIAGPSTEQSVVESKDRKANAHLILKLMCDSVVLRPHLQELLSAK
DARGMTPFMLAVSGRAYPAAITVLEAAQKIAKVGDPAIGDKDGADSVFMEMICPSGTNPD
DSPLYVLCCNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARVCHKGHDCKLKRT
SPTAYCDCWEKCKCKTLIAGQKAARLDLLYRLLTTTNLVTTPNSRGEHILLFLVQTVARQ
SVEHCQYRPPRIREDRNRKAANAEDSDMPDHDLEPPRFAQLALERVLQDWNALKSMIMFG
SQENKDPLSASSRIAHLLPEEQVYLNQQSGTIRLDCFTHCLIVKCAPDITFIDTLLGTLV
KELQNKYTPGRREEAVIVTRRFLRSVARVFVILSVEMASSKKKNNFIPQPIGKCRRVFQA
LLPYAVEELCNVSESLIVPVRMGIARPTAPFTLASTSIDAVQGSEELFSVEPLPPRPSPD
QSSSSSQTAASYIIRNSQPRRSSQSQPVRGRDEEQDDIVSADVEEVEVVEGVAGEEDHHD
DQEEQGEENAEAEGQHDEHDEDGSDMELDLLAAAETESDSESNHSNQDNASGRRSVVTAA
TAGSEAGSRVSLAFPIFGASSVPAFFSEDDSQSNDSSDSDSSSSQSDDVDQETFLLDEPL
ERTSSSSHANSAAQAPRSMQWAVRNTPSQRASGNAPSSSSAPAASSTGLIYIDPTNLRRS
SAISSSAAAAAAALEASNSSSYLTSASSLARAYSIVIRQISDLMSLIPKYNHLVYSQYPA
AVKLSYQDAVNLQNYVEEKLIPTWNWMVSIMDSTEAQLRYGSALSSAGDPGHPSHPLHAS
QHSARRERMTAREEASLRTLEGRRRAATLLTARQGMMSARGDFLNYALSLMRSHNDEHSD
VLPVLDVCSLKHVAYVFQALIYWIKAMNQQTTLDTPQMDRKRNREILELGLDNEDSEHEN
DEDTNQSSTLQDKDEESVPAEMGQNHPFFRRSDSMTFLGCIPPNPFDVPLAEAIPLADQP
HLLQPNARKEDLFGRPSQGLYSSSYMATKGLADGSMDRNCLEVNMGSSLPSPSQILPTKM
SYSANLKNVMNMETRQRSAENQSLGEQELEASKPGPSPHDLAAQLKSSLLAEIGLTESDG
PPLPSFRPHCSFMGMMISHDMLLGRWRLSLELFGRVFMEDVGAEPGSILTELGGFEVKES
KFRREMEKLRNLQSRDLALEVDRDRDQLIQQTMRQLNAHFGRRCTTTPMAVHRVKVTFKD
EPGEGSGVARSFYTAIALALLSNDKLPNLDCVQSVSKGMQASSTCHHDYNSNLMQRLRNR
DRERERRSGGLRAGSRRDRDRDSRRQLSIDTRPFRPSSEGNPSDEPDPLPAHRQALGERL
YPRVHTMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVEEAMELLIAHGRENGADSI
LDLGLPEAPEKAQQQENRKRHGSTRSVVDMELDDPDDGDDNAPLFYQPGKRGFYSPRPGK
NTEARLNCFRNIGRILGLCLLQNELCPITLNRHVIKVLLGRKVNWHDFAFFDPVMYESLR
QLIRHSQTGEADAVFAAMDLAFAIDLCKEEGAGQVELVSGGVNMPVTPLNVYEYVRRYAE
HRMLVVAEQPLHAMRKGLLDVLPKNALEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDES
GENADKLLQFKRWFWSIVEKMSMTERQDLVYFWTSSPSLPASEEGFQPMPSITIRPPDDQ
HLPTANTCISRLYVPLYSSKQILKQKLLLAIKTKNFGFV
NT seq
8580 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaatacacttcgttgtccacccgttgcccgggaccgaggatcagctcaatgac
aggcttcgggaagtctcagaaaaactgaacaaatacagctacaacagtcatccgcatctt
aatctgctggagcaggccactctaaaacagtgtgttgttggtccaaaccacgctggattt
ctccttgaggatggacgcgtgtgcagaatcagcttttctgtccagcccgatcgcatggag
ctcagtaaaccggatggcagcgatggttcaaagttgagcagtggttcagggacaggaagg
agctccagagcaggcaggaccagtgatccgccctggttcctgtctggttctgacacactg
ggcagactggcaggcaacacccttgggagtcgctggagctctggggtaaatggaggcagt
ggaggaagtggcagtggaggaggagcgggaggaggtggagctggaggcggcagcagtgga
ggaggaggcagcagcggaggcggaggcggtggcggcacgtcaggcaggtcgtcgacggcg
gctcgtgattcccgtcgccagaccagggtgatccgtaccggaagagaccgtggttcgggc
ctgttgggcagccagccgcagccagtcatcccagcatcagtcatccctgaggagctcatt
acacaggcccaggtggtcctgcagggaaaatctaggagtgtgatcatcagggagctccag
aggacaaacctggatgtaaacctcgctgtcaacaatctgctgagtcgtgatgatgaagat
ggagatgatggagatgacacagctagtgaatcctacctccctggtgaggacttgatgtcc
ctattagatgcagacattcactcagcccatcccagtgtcatcatcgacgcagacgccatg
ttctccgaggacatcagctactttggttacccctcttttcggcgttcctcactctcccga
ctgggatcctctagagttctccttctccccctagagcgcgactcagagctgttgcgtgag
cgcgagtctgtattgaggttacgtgaacgccggtggcttgatggagcctcatttgacaca
gaacgaggttccaccagccgcgaaggggagcccagcctcgacaagaagagcatcccagtt
cagagtcccgtctcgctgggggaggagcttcagtggtggcctgacaaggatggtgtgaag
tttgtgagcattggagccatgttctccgagctggtagctgtgagcaccaaaggggagctc
taccagtggaagtggagcgagcctgaaccctacagaaatcctcagaacccttccaatcat
caccctcgtgcatctttcctgggcctgaccaacgaaaggatcactttactgtctgctaac
agcatcagagccactgtagccacggagaccaacaaggttgccacctgggtggatgagacg
ttgagcaccgtggcttctaagctggagcacagcgctcaggcttttcctgaactacaggga
gaacgcatggtttcactgcactgctgctctctctacacatgtgcacagctggagaacagc
ctctactggtggggtgttgtgccttttagtcaaaggaagaagatgcttgaaaaggcaaga
gccaagaacaagaagccaaagtccagtgctggcatttcttcaatacccaacattacagtg
ggaacacaggtgtgcttgaggaacaaccccctgtaccacgctggtgcagtggccttttct
gtcagcgctggaattcccaaagtgggtgttctgctggagtctgtctggaacatgaatgac
agctgcaggttccagctgcgctcaccagagagcctcaagaatatggagaaaactaccaag
acccaggaaatcaagatggaaagcaaacccgaactggtgaagactgagatgggtcctccc
ccctccccggcttctacctgcagtgatacatcttctattgctagcagcgcctctctgccc
tacaagcgaagacgctccactccagctcccaaagaggaagagaaggtaaacgaggagcag
tggcccctcagggaggtggtcttcgtggaggacgtcaaaaatgttcctgtggggaaggtg
ctcaaggtggacggtgcatatgttgccgttaagtttcctgggacgtccagcagcatgaac
aaccagaatacaactgctccccctgactcagacccgtcatcattgttgcaggactgcagg
cttctcagaatagatgagctccaggtggtcaaaacaggtggaactcctaaagttccagat
tgtttccagcgaacacctaaaaagctgtgcatcccagaaaaggctgagatcctggctgta
aatgtcgactcaaaaggagtccatgctgtgctgaaaaccggtaactgggtgaggtactgc
atctttgacctggctacaggcaaagcagagcaggagaataactttcccaccagcaatctc
gccttcctgggacaaagtgagcgcaatgtggccatctccactgcaggacaggagtctccc
attgttcttcgggacggaaatggcacgatttatcccatggctaaagattgcatgggtgga
attcgagatcctgactggttggacctccctcccattagctgtctgggaatgggggttcac
tccttggccaatctgccatctaactccaccataaagaaaaaggctgctgttattatcatg
gcagttgagaagcagaccctgatgcagcatgtgctgcggtgcgactacgaagcttgtcgg
cagtacttggtcaaccttgagcaggccgtcctcttggatcaggggggccaagccctggag
gcacttctgggccaccgctgtgatgggaaccgtaacatcctccatgctgctgtctctgtc
tgtttccctgttagtaacaaggagaccaaagaagaggaagaagctgaaaggtctgaaaga
aacacttttgcggagcgtctgtctgctgtagaagccatcgccaacgccatctctgtggtc
tcgagcaatagctctggaaacaggacgggttcctccagcagcagagggcttcgactgagg
gagatgatgcggcggtctctgagggcggcaggtctcggccgccatgagtctggtccgtca
tccagtgaccatcaggaccctgtctccccacccattgctccaccaagctgggtccctgac
cctccacccatggaccccgacggtgacattgacttcattctggctcctgctgttggctca
ctcaccacggcctccactggaaccagccaggggcccagcacctccaccatagcaggacca
tcaactgagcagtctgtggtggagtccaaagacaggaaggccaatgcccacctcatcctg
aagctgatgtgcgacagtgttgttctgaggccacatctgcaggagctgctctctgcaaag
gatgccagaggaatgactccgttcatgttggctgttagcgggagagcctatcctgcagct
atcacggtgctggaggcggcacagaaaatagccaaagtgggtgacccggccattggagat
aaggacggggccgattctgtgttcatggaaatgatctgcccatcgggtaccaacccagat
gattctccactgtacgttctctgctgcaacgacacctgcagtttcacttggactggagcc
gagcacattaaccaggacatatttgagtgtcgaacgtgtggcctgctggagtccctctgc
tgctgcacggagtgtgcaagagtgtgccacaaaggacatgactgcaagttgaaaaggacc
tcacctacagcctactgtgactgttgggagaaatgtaaatgtaaaacactaattgctgga
cagaaggccgctcgcttggatttgctgtacaggttgctcacgacgacgaacctggtcaca
actccaaacagcaggggggagcatatattactgttcctggtccagactgtggccagacaa
agtgttgagcactgtcagtacagaccaccacgcatcagagaagacaggaaccgcaaagct
gccaacgctgaagattctgatatgcctgaccatgacctcgaaccgcctcgctttgctcaa
cttgctctggagagggttctgcaggactggaatgccctcaaatcaatgatcatgtttggt
tctcaggaaaacaaagacccacttagtgccagcagtagaatcgcccacctcctgcctgaa
gaacaggtctacttgaatcaacaaagtggcaccatccgccttgactgtttcacacattgc
ctcattgtcaaatgtgctcctgacatcacattcattgacacattgctggggaccctggtg
aaagagctgcagaacaaatacactcctggccggagagaggaggcagtgattgttaccagg
aggttcctgcgctccgtagcgcgagttttcgtcattctcagcgtggaaatggcatcgtca
aagaagaaaaacaacttcatcccgcagccgattgggaagtgccggcgtgttttccaggcc
ctgctcccgtacgctgtggaggagctgtgtaacgtgtcggagtctctcatcgtccccgtc
cgcatgggcatagcgcgacccacggctcctttcaccttggccagcacgagcatcgatgcg
gttcagggcagcgaggagctcttctctgtggaaccgcttccaccgagaccctcacccgac
caatcaagcagctctagccaaaccgctgcctcctatatcatcagaaactctcagcccaga
cgcagcagccagtctcagcctgtcaggggacgagacgaggagcaggacgacatcgtgtca
gctgatgtggaggaggttgaagttgtggagggagtagcaggggaagaagaccaccatgac
gaccaggaagagcagggagaggaaaatgcagaggcggagggtcagcatgatgagcacgac
gaggatggaagtgacatggagctggaccttctggcagcagctgaaaccgagagcgacagt
gaaagtaaccacagtaatcaggataacgccagcggtcgcaggagtgttgtcactgcagca
accgctggctctgaagcaggcagtagggtgtccttggcatttcctatttttggcgccagc
agtgtccctgccttcttttcagaggatgactctcagtccaatgactccagcgactcggac
agcagcagcagtcagagtgacgacgttgaccaggagaccttcctgctggatgagcctctg
gagagaaccagcagctcttcgcacgccaacagcgcggcccaggctcctcgctccatgcag
tgggctgttaggaacacccccagccaaagggccagtgggaacgctccctccagctcctca
gcacctgctgcgagctcaactggcttgatttatatcgaccccaccaacctgcgccgctcc
agcgccatcagctccagtgctgctgcagcggctgcagctttggaggccagcaactccagc
agctacctgacatcggccagcagcctggctcgcgcctacagcatcgtcatcaggcagatt
tcagacctgatgagcttgattcccaagtacaaccatctggtttattctcagtatcctgct
gctgtaaaactctcctaccaggatgcagttaacctacagaactacgtggaggaaaagctg
attcccacctggaactggatggtgtccatcatggactccacagaggcccaactgagatac
ggttcagccctgtcgtctgctggagacccgggtcaccccagtcacccgctgcacgcctcc
cagcactcagcgcggcgggagcgcatgaccgctcgggaagaggccagcctccgcactctg
gaaggacgaaggagagcagccactctgctgacggctcgtcagggcatgatgtcggctcgg
ggcgacttcctgaactacgctctgtcactgatgcgctcccacaacgacgagcattctgac
gtgcttcctgtcttggacgtgtgctcgctgaaacacgtagcttatgttttccaggctctg
atatactggattaaggctatgaaccagcaaaccaccctggacaccccccaaatggataga
aagagaaaccgagaaatcttagaacttggtttggacaatgaggattctgagcacgagaat
gacgaggacactaatcaaagttcaaccttgcaggacaaggatgaggagtcggttccagct
gagatgggtcaaaaccacccgttcttccgccgctctgactccatgaccttcttaggctgc
atccctcccaaccctttcgacgtccctctggcagaggccattccgctggcagaccagccc
catctgctgcagcctaatgccagaaaggaggacctgtttggacgcccctctcagggcttg
tattcgtcctcttacatggcaaccaaaggcctggctgatggaagcatggacagaaactgc
ctggaggtaaacatgggctcctctctaccctccccctcccagatcctccctaccaaaatg
tcgtattccgccaacctgaagaacgtcatgaacatggaaaccagacagaggagcgctgag
aaccagtcactgggggagcaggagctggaggcttctaaacctgggccttcgcctcatgac
ctcgcagcccagctgaagagcagcctgctcgctgagatcggcctcactgagagcgacggt
cctccgctgccgtccttcagacctcactgtagtttcatggggatgatgatatctcacgat
atgttactgggccgctggcgtctgtcgttggagctgtttggtcgggtcttcatggaggac
gtcggagctgagcctggatctattctaactgaactcggcggctttgaggtgaaggagtcc
aagttccggcgggagatggagaagttgaggaacctgcagtcgcgtgacctggccctggag
gtggaccgtgatcgagaccagttaatccagcagaccatgcgtcagctcaatgcgcacttt
ggcaggcggtgcacaacaacgcctatggccgtccaccgggtgaaggtcaccttcaaagac
gagcccggagagggcagcggcgtggcccgcagcttctacacggctatcgcgctggcactc
ctgtccaacgacaagctacccaacctggactgtgttcagagtgtcagcaagggcatgcag
gccagcagtacgtgtcatcacgattacaattcaaacctcatgcaacgcctgaggaaccga
gacagggagagggagaggagaagtggagggcttcgagcgggatcgcggagggaccgagac
agggactccaggaggcaactctctatagataccaggccgttcaggccttcgtctgaagga
aaccccagtgatgagcccgaccctcttccagcacacagacaggctctgggggaaaggctg
taccccagagttcacaccatgcagccggcgtttgccagtaaaattaccggcatgctgctg
gagctgtctccggctcagctgctgctgctactggccagtgaggactctctcagagccaga
gtggaagaggccatggagcttctcatcgcgcatggaagggaaaatggtgcagacagcatt
ctggatctgggactccccgaggctccagagaaagctcagcaacaggagaaccgtaaacgt
catggttctacacgtagcgtggttgacatggagctcgatgacccagatgacggggacgac
aacgcgccgctcttctaccagcccggcaaacggggcttctactcccctcggcctggaaag
aacacagaggccagacttaactgttttcgtaatattggcagaatactggggttatgcctg
ctgcagaatgaactctgtccaatcacattgaacagacacgtcattaaagtgcttcttggc
agaaaggtgaactggcatgactttgccttctttgaccctgtcatgtatgagagcctgcgg
cagctcatacgccattcccagaccggtgaagccgatgcagtttttgctgccatggatctg
gcctttgccattgatctgtgtaaagaagaaggagctggacaggtggagctggtatctggt
ggagtcaacatgccagtgactcctctcaacgtctatgagtatgtgaggcggtacgcagag
cacaggatgctggtggtggccgagcagccgctccatgcgatgaggaagggtttgctggac
gtacttcctaaaaacgctctggaggacctgacagccgaggacttcaggctgctggtgaac
ggctgtggagaagtcaatgtccagatgctgatcagcttcacttctttcaacgatgaatca
ggggagaatgcagacaaactgctccagttcaaacgatggttttggtcgatagtggaaaag
atgagtatgactgagaggcaagacctggtgtacttctggacctccagcccatctctgcca
gcgagtgaggaaggcttccagcccatgccctccatcacaatccggcccccagacgaccag
cacctccccaccgccaacacctgcatctcccgtctctacgtgccactctactcttctaaa
cagatcctcaaacagaaactcctgctagccattaagaccaagaattttggttttgtgtag
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integrated database retrieval system
