Oryzias latipes (Japanese medaka): 101169222
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Entry
101169222 CDS
T02443
Name
(RefSeq) septin-5 isoform X2
KO
K16943
septin 4
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
101169222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101169222
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ola03037
]
101169222
04812 Cytoskeleton proteins [BR:
ola04812
]
101169222
Membrane trafficking [BR:
ola04131
]
Exocytosis
Calcium ion-dependent exocytosis
Septins
101169222
Cilium and associated proteins [BR:
ola03037
]
Motile cilia and associated proteins
Sperm associated proteins
101169222
Cytoskeleton proteins [BR:
ola04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 2
101169222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
RsgA_GTPase
MMR_HSR1
GTP_EFTU
AIG1
VapE-like_dom
Ras
AAA_16
Roc
MmpB
ABC_tran
AAA_22
AAA_29
Motif
Other DBs
NCBI-GeneID:
101169222
NCBI-ProteinID:
XP_011480900
LinkDB
All DBs
Position
13:16731069..16763145
Genome browser
AA seq
493 aa
AA seq
DB search
MEDSELDPQSSSDEHDSCSASPNQARHPDGQFFQHSSHSDDSEVENIMQEPQQQHQDHGG
HEADRENEGQDHPHTPSYLRPPVAGRAQSDSGSEPSLTQSKCVEFDLPSPVSPSRPKSPW
SLFDPYDNNEDQDKEYVGFATLPNQVHRKSVKKGFDFTLMVAGESGLGKSTLVNSLFLTD
LYKDRKLLNAEERITQTVEITKHTVDIEEKGVKLKLTIVDTPGFGDAIDNTECWKSVADY
IDQQFEQYFRDESGLNRKNIQDNRVHCCLYFISPFGHGLRPLDVEFMKALHEKVNIVPVL
AKADTLTPTEVQKKKIKIREEIEQYGIKIYQFPDCDSDEDEEFKQQDLELKESIPFAVIG
SNTVVEAKGKRVRGRLYPWGIVEVENSAHCDFVKLRNMLVRTHMQDLKDVTRETHYENYR
AQCIQSMTRMVVKERNRNKLTRESGTDFPIPMGPAVSESETEKLIREKDEELRQMQEMLQ
RIQDHLITQKDGH
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggaggacagtgaacttgaccctcagtcttcatcagatgagcacgactcctgctcagcc
tcccctaatcaggccaggcatcctgatggacagtttttccagcattcaagccattcagat
gattcagaagtggagaacataatgcaggagcctcagcaacagcatcaggatcatggaggt
catgaggctgatagggagaatgagggccaagaccatccacacaccccgtcttacctacgg
cccccggtggcgggtagggcccagtcagactcagggtcagagcccagcttgacacagagc
aaatgtgtggagtttgacttgccatcaccagtcagtccctccagacccaagagcccctgg
tctctatttgacccgtacgacaataatgaggaccaggacaaagaatatgtgggctttgcc
actctgccaaaccaggtgcaccgcaaatccgtcaagaaaggatttgacttcacattgatg
gtggcaggggagtcaggcctgggaaagtctactctggtcaacagtctgtttctcactgat
ctatacaaagataggaagctgctgaatgctgaagagcgaatcacacaaactgtggaaatc
accaagcatacagtggatatagaggagaaaggagtcaaactgaagctcactatcgtggac
acccctgggtttggtgatgctatagataacactgaatgttggaagtcagtggctgactac
atcgaccagcagtttgagcaatacttcagggacgagagtggactcaaccgcaagaacatc
caggacaaccgcgttcactgctgcctctatttcatttcccccttcggccatggccttcga
cctcttgatgtggaattcatgaaagctctgcacgagaaggtcaacatcgtcccggtgttg
gctaaagccgacacgctcactccgactgaggtccagaaaaagaaaataaagatcagggag
gaaattgagcagtatggaatcaagatctatcaatttcccgactgtgactctgatgaagat
gaggagttcaagcaacaagaccttgagttaaaggaaagcattccttttgcagtaatcggt
agcaacaccgtggtggaggcaaaagggaaaagagtgcgaggccgtctctacccatggggc
attgttgaagttgagaattcggcacactgtgattttgtgaagctgaggaacatgcttgtt
cgcacacacatgcaagacctcaaagatgtgacccgagagactcactatgagaactacaga
gcccagtgcatccagagcatgacccgcatggtcgtgaaggagcgcaaccgcaataagcta
accagggagagtggcacagacttccccatacccatggggcctgcagtgtcggagagcgaa
acagaaaagctcatccgagagaaagatgaggagctgcggcagatgcaggagatgctgcag
aggatccaggaccatttgatcactcagaaggacggccattaa
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