KEGG   Oryzias latipes (Japanese medaka): 101170118
Entry
101170118         CDS       T02443                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101170118 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ola03041]
    101170118 (smndc1)
Spliceosome [BR:ola03041]
 Complex A
  U2 snRNP components
   U2 related factors
    101170118 (smndc1)
 Complex B
    101170118 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    101170118 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR PUA_4 SspH Atrophin-1
Other DBs
NCBI-GeneID: 101170118
NCBI-ProteinID: XP_004077134
LinkDB
Position
15:19586430..19590833
AA seq 238 aa
MSEDLVKQLNSYKAQLQQVEFALSTDTENEDLQKLQKDLREVIELTKDLLSSQPTDGTST
TTSTEKPPKKHTWKVGDRCMALWGNDGQVYEAEIEEIDRENGTAAINFIGYGNAEVVPLQ
NIKALEEGMLSIDDGGAKAKSKKEMIAEQREYKKKKAQKKVQRMKELEQEREEQKSKWQQ
FNNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYNDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtctgaggacctggtgaaacagttgaacagctacaaagctcagctccagcaagtcgaa
tttgctttgtctaccgacactgaaaatgaagaccttcaaaagcttcagaaggacttacgg
gaggttattgaacttacaaaagatctgctgagctcacagcccactgatggaacctcaact
accaccagtacagaaaaacctcccaaaaagcatacctggaaagtgggagatcgatgtatg
gctttgtggggtaatgatggacaggtgtatgaagcggaaattgaggagatagaccgagag
aacggaactgcagccataaacttcatcggatatggaaacgctgaagtggttcctctgcag
aacatcaaggccttggaggagggaatgctctctattgacgatggaggtgcaaaggcaaag
tccaagaaagagatgatagcagagcaacgggaatataaaaagaaaaaagcccagaaaaag
gtccaaaggatgaaggagttggagcaggagagggaagagcaaaaatccaaatggcaacag
ttcaacaacaaagcatactcgaagaacaaaaaaggacaggtcaaaagaagcatatttgct
tccccggaaagcgtaaacggaaaggtgggagtgggaacttgtggtatagcagacaaaccg
atgacccagtacaatgacacgtcaaagtacaacgtcaggcatttaatgccccagtga

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