Oryzias latipes (Japanese medaka): 101172326
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Entry
101172326 CDS
T02443
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ola03400
]
101172326 (ap5b1)
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
101172326 (ap5b1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
101172326
NCBI-ProteinID:
XP_004069249
UniProt:
H2MB38
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All DBs
Position
5:complement(24472931..24477587)
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AA seq
934 aa
AA seq
DB search
MASGWVEKVSAFCRSPSRFLFGTSSEVFLAELLRELRDDRANYTVKVLLLSPLCEYPALL
CPSDSVGEETALELMSIFTQSPPKFVQFRSQLLVALTCVLTCSSDVSGRLRAFPDFLDLL
LQLAQDTSDLHGDAAPRSLRATACDCLREMEALYPGLLSQRLELLGGHRHQETSRLHQAY
AGLQALVLRNAVYQLTQEKEAGAAHLRALLGGNESVECEADQNAGPASGKDSAPLSSVIF
GPMGTVPTLHTGPDCKELRSALSSLLEESYLFTPLSQAALLYRLTEVVAMVPAIPPTIFR
AQLLRLLGTSEVTLLHTTLLMKSAFTDSLFSSEDEAFLFKRLVVLSQHPLLSTPEKLFYM
DCILHFPENRPISCGDSDEALPVLLTPRLASALLPVVFNDSATLLSRFNLLSLVYLEAGE
EEDGRGLEYLYEHLTSLLRIVESGGKRENVVTFFRAAFLFLFHFHHVERYCDNLSQQLCQ
LYLQHTRFAPHLINLADRTQEKLPDSSWALGLLKALQRVISETPVSQTTLRDLRWHLKVL
TRAAEEGEISQHGTLRFLSGIIPPSSSSLSSSGDWRLGNGILGVCRRLLVHPSLESMFIP
LADILQHVAGHYGDTDIRDHARLYYTLLTTLSREKLATVLAHHAEGGQQVKKRTLSCLMT
EGEGLTSILTIHETEVAIIRLIEADCEQLEAEDLVQDEAERGEPVLETYRAQFGSAAFAS
QVTLKFLLTHTETRDARFDQLFSIRLHFSLTDDHYSELQDLSVPCLFRERPPPVVTLTLK
PREPYPSSLHVSAIFTTQDGLTWHTTLPDIRVCFQQIFLPLPAPPSWGRAGRQAVFAGLW
EEMSSETGECASSLFCCQLEEKALSALVEKHFLPFLVSDPSHKDEFRALLFLPPQSHVLL
KISSEEDAVHFCIATDNWELLPHINDYLLKITAS
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggctgggtggagaaggtttccgccttctgccgcagtccaagtcgcttcctc
ttcgggacgagctcggaggtttttctcgccgagctgctccgagagctccgggacgacaga
gcaaactacacagttaaggtcctcctgctgtctcctctgtgtgagtacccggcactgctg
tgcccctcagactctgttggggaggagaccgctttggagctcatgtccatcttcacccag
tcccctcccaagtttgtgcagttccgctctcagctccttgtggccctcacctgcgtcctc
acctgctcttcggatgtgagcggtcggctccgagcgttcccggatttcctggatctactc
cttcagctcgctcaggacaccagcgaccttcacggcgatgctgccccgcgctcgctccgg
gccacagcttgcgactgcctgcgtgagatggaggccctctaccccggccttctctcccag
cgccttgagctgctgggtggacaccggcatcaagaaacctccaggctgcaccaggcctat
gcggggttgcaggccctggtcctaagaaatgccgtctatcagctcactcaggagaaggaa
gcaggtgctgcacatttaagagccctcttgggaggaaatgagtcagtcgaatgcgaggca
gaccagaacgcaggcccggcgagcggcaaagactctgctccgctgtcctctgtaatcttt
ggaccgatgggcacagtgccgactctccacaccggacccgactgtaaggagctgcgctcc
gccctctcctccctgctggaagagtcttatctcttcacccctctgagccaggctgcgctg
ttatacaggctcacagaggtggttgccatggtgcccgccattccccccaccatattcaga
gctcagctgctgcgactactgggaaccagtgaggtgaccctccttcacaccacactgctg
atgaagagcgccttcaccgacagtctgttcagctccgaggacgaagcgtttctcttcaag
cgactagttgtcctatcgcagcacccgcttctgagcacacctgagaagctcttctacatg
gactgcatcctgcactttccggagaaccgtccaatcagctgcggcgacagcgacgaggcc
ctccctgtgctgctgaccccccggctggcttcagctctgctgcccgttgtgttcaacgac
agcgccaccctgctgtcccgctttaacctgctgtctctggtgtacctggaggcgggggag
gaggaggacggccgagggttggagtacctgtacgaacacctgacgtcgctgctgcggatc
gtagagagtgggggcaagcgggagaacgttgttactttctttagagcggccttcctcttc
ctttttcattttcaccacgtggagcgttactgcgacaacctgagccagcagctgtgccaa
ctctacctccagcacacgcgcttcgcgccccacctcatcaacctggccgatcggacccag
gagaagctgcctgactcctcctgggctttggggctcctgaaagccctgcagagggtcatt
tctgagacccccgtcagccaaacgaccctgcgtgacctcagatggcatctgaaggtgctg
actcgagcggcggaggagggagagatctcgcagcacggcacactccgctttctgtccggc
atcatcccgccatcctcatcctcgctgagctcaagcggcgattggcgcctgggaaacggc
atcctgggagtttgccgtcgcttgctggtccaccccagtcttgagtccatgttcatccct
ctggccgacattctgcagcatgttgccggtcactatggagacacagacatccgggaccac
gcccgcctctactacacccttctcaccactctgtccagggagaagctggccaccgtgctg
gctcaccacgctgaggggggccagcaggtcaagaagcgaactctgtcctgccttatgact
gagggggaaggactgacgagcatcctgaccatccatgagacggaagtcgcaataatcaga
ctaattgaagctgattgtgaacagctggaagctgaagacctcgtgcaggacgaggcagag
cgaggagagcccgtgttggaaacctacagagctcagttcggcagcgccgccttcgcctca
caagtcaccctgaagttcctgctgactcacacggagacccgagacgctcgctttgatcag
ctcttcagcatccgcctccacttcagcctcactgatgaccactacagcgagctgcaggac
ctcagcgtgccgtgcctgtttagggagaggccgccgcctgtcgtgacactgacgctgaag
cccagggagccttacccaagcagccttcacgtcagcgccatcttcaccacccaagacggg
ctcacctggcacactaccttaccagacatccgagtgtgttttcagcagatcttcctgccc
ctgcccgcccccccgagctggggcagggcagggaggcaggccgtgtttgcaggattatgg
gaggaaatgtcttccgaaacgggggaatgtgccagcagtctgttctgctgccagctggag
gaaaaggctctgagcgcgctcgtggaaaagcacttcctcccattcctggtgtcagatccg
tcccacaaagacgagttcagagcgctgctcttcctccccccacagtcccacgtcctgctg
aagatcagctcggaggaagacgcggtgcatttctgcatcgccaccgacaactgggagctg
cttcctcacataaacgactatctgctgaaaatcacagccagctga
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