Oryzias latipes (Japanese medaka): 101172689
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Entry
101172689 CDS
T02443
Symbol
poln
Name
(RefSeq) DNA polymerase nu isoform X1
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
101172689 (poln)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ola03400
]
101172689 (poln)
Enzymes [BR:
ola01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
101172689 (poln)
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
101172689 (poln)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
Motif
Other DBs
NCBI-GeneID:
101172689
NCBI-ProteinID:
XP_023821601
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All DBs
Position
18:18325811..18404914
Genome browser
AA seq
1308 aa
AA seq
DB search
MEDGAGSEDRLYSGPLSQAAKKILAVLRTNSLVQPKCKQPFTSQRSETKCSQSGSWALNC
TSQEKEKDEFPYQPQVLCLSTPEMISQTSSSCQRPDSSLPSQTSPCLSICLGSSLQRQTP
QTVTYYQLSQTFSIRNPSESSSYLSSRAPLFSQHRALESEASICGKESSPFSNQEGDGTS
KPQTIPSRNPHRRTEPSFTFGKSSDEEIFSKMLSTTPKHLPICPEVFQESDKPSDEGNHS
VKEMDISGASFSPGKWKQSNLVEETASGTEIHFQMSESKAFEPEHVLTFANVPEAEERNH
TELEFGSLHVQLEDTGTCYPKRQTVGGESDHRAVEQTELRSKLMMERGQLQCSDIQLQKK
ECERNCEESHPTDAETGKTRQGRHVQLFCHDQRSPSAEVSDGEWCLVPTLSQVCGTQPSV
FRAPCLLDNQQHGANEHSSNGSSRESTSSLMLNSSDTIAAGPNLSSVHEVTLAASVPTKE
LEDHSLHSYQSQSYHLSLPSSLFLKRKCDVSQQQYGVPPLKMYRPRFPPNWDSFFPHKRM
AEGRTSVPMSAEFVPQTTPSVQTKNSHFTEHRQLLVPTQTQHYFETFQGQYRETEKDACK
QTLSYKSRKSMSHKCSIDPPASGVKTLPEAVSNIDLQSQFKKGCLPSTLMSDSRVTDLGK
LNSEERIHILQKAKQSEVLVLTMWYQDGTTQLDPEGKLASQVCGLLILMKSESCCSTPED
SLGLKDSLVYLTLKHIHVWVQDQRDHDEEQFTRDLLLQVISRSPLAVCYKAKDLLRTVLQ
FYKEDSWKQVSGCQIQDPQVSGWLLDPADQAACYQDLLYKHCKKARSTHSLGPKKVSQIL
SDLCWLHKLHMILCSKLQSRGLWKLYTDVELKMIPVLAAMESHCIYVDKETLKKMSDLLG
TKLKQLEQEAHQAAGQRFLVTSSSQLRTVLFEKLRLHEYCENKKLPKTINKQQSTSEAAL
LQLQDLHPLPKIILEYRQVHKIKSTFIDGILTCMKSKNYISSTWCQTSAVTGRISAKHPN
FQALPKQPLQITKKLFVHGGAEEVVTVHPRAMFVPHKGWTFLAADFCQVELRLLAHFSSD
PDLLHLFTIPQADVFTMLAAQWKGLNMEDVSSEDREHAKRIIYSVIYGAGRERLSGILGV
SAEQASQFQHRFLQTYRDVQTFIQKTIQQSHKQGYVLSIMGRRRNLPDINSPDWGVRMQS
ERQAVNFVVQGSAADLCKMAMIRIFNLVSTSSSLTARLVAQLHDELLYEVEDSQLEPFAT
LVKSTMESLQHIDHLGVHLKVPLKVAVSSGKTWGSMSEFNIPLMPPSS
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggaagatggggctggttcagaagacaggctgtactctggccctctgtcccaggcagcc
aaaaagatcctggcagttctgcggaccaacagtctcgtccagcccaaatgcaaacaaccc
tttactagtcaacgaagtgaaaccaagtgcagccaaagtgggtcttgggctctgaactgc
accagtcaggagaaagagaaagatgagttcccctatcagccccaggtcctctgcctttcc
actcccgagatgatctctcagacctcttcctcctgtcaaagaccagacagctccttacca
tcccagacctccccctgtttgtccatctgtctgggttcctccctccaaaggcagactcct
caaacagtgacgtattatcagctctcacagacattttccatcagaaatccatcagagtct
tcttcatacttgtccagcagggcccctctgttttctcagcatagggctctggagtcagag
gcatccatctgtggaaaagagagctctcctttctcaaatcaagaaggagatggaacttct
aaaccccaaactataccctccagaaatcctcatagaagaacagagccatctttcactttt
ggtaaatcatcagatgaggagatcttcagtaaaatgttgtctactacaccaaaacatctg
ccaatatgtcctgaagtctttcaagagtcagataaaccgtcagatgaagggaaccactct
gtaaaggaaatggacatctctggtgcttcattcagtccaggaaagtggaaacagtctaac
cttgttgaagaaactgcctctggaacggaaatacactttcagatgtcagagtctaaggca
tttgaaccagaacatgtactaacttttgcaaacgtgcctgaagctgaggagaggaaccac
acagagttggagtttggatctttacatgttcagctggaagacaccggtacctgttatcca
aaaagacaaacagtgggaggtgaaagtgaccacagagcagtggaacagactgagttacgc
tctaagctgatgatggagagaggacagctccaatgttctgacatccagctgcaaaagaaa
gagtgtgagagaaactgtgaagagtcacatccaacagacgcggagacagggaagacgaga
cagggcagacatgttcaacttttctgtcatgatcagaggagtccctcagctgaggtttca
gatggagagtggtgtctcgtgccaacattgtcccaggtgtgtgggacacaaccatcagtg
ttcagagctccatgtctccttgacaaccaacagcacggtgccaatgaacatagctctaat
ggaagcagcagagagagcacatcaagcttgatgctaaactcatcagacactattgctgct
ggacctaacctctcctcagtgcatgaagttactttagctgcttctgtgccaactaaagaa
ctggaagaccacagcctacatagttaccagagccagtcatatcatctttctcttccttca
tcccttttcttaaagaggaagtgtgatgtttctcaacaacagtatggagtccctcctttg
aaaatgtaccgaccaagatttcctccaaactgggattctttttttccacacaagagaatg
gcagaaggaagaacgagtgtgccgatgagcgcagagtttgttcctcaaacaacgccttca
gtccagactaaaaacagtcattttacagaacacagacagcttctcgttccaacacaaact
caacactattttgaaacatttcaaggtcagtacagggaaactgagaaggatgcttgtaag
cagaccctatcgtacaaatcgcgcaagagcatgtcgcacaaatgtagcattgacccgcct
gcaagtggtgtgaaaactttacctgaggctgttagtaatattgatctacagagccagttt
aaaaagggctgcctgccttcaacgctgatgtctgactcaagagtcaccgatcttgggaag
cttaactctgaagaaaggatacacattcttcagaaagccaaacaatctgaagtgctggtg
ctgactatgtggtaccaagatggaacaactcagttggaccctgaagggaagctggcttca
caagtatgcggcctcctcatactgatgaagagcgagtcttgctgcagcacacctgaggac
tcacttggattgaaagacagcctggtctacttaacactcaagcacattcacgtttgggtg
caagatcaaagggaccacgatgaggagcaatttacaagagatttacttctacaagttata
tcaagatctccgctggcggtgtgctataaggcaaaggatttgcttcgtactgttcttcag
ttttacaaggaagacagctggaaacaggtttcaggttgtcaaatccaggatccacaggtg
tcagggtggctattggatcctgcagatcaggcagcttgttaccaggatctcctttataaa
cactgcaaaaaggcccgcagcacacacagtctagggcccaaaaaggtttctcagatcctt
tcagatctctgttggcttcacaagcttcacatgatcttatgttctaaactgcagagccgg
gggttgtggaagctctacacagatgttgagttgaaaatgatcccagttctagcagccatg
gagagtcactgtatctatgtggacaaagagactttgaagaaaatgtctgacttgcttggg
actaaactcaaacagctggagcaggaggcccaccaagcagctgggcaaagattcctggtg
acaagcagcagtcagttaagaacagttttatttgagaaattgcgcctccatgaatattgt
gagaacaagaagcttcccaagaccatcaacaagcaacagtcaacatcagaggctgcactg
ctgcagctccaggacctgcacccattgccaaaaatcatcctggagtacagacaggttcac
aaaatcaagtccactttcatagatgggattctaacctgcatgaagagcaagaactacatt
tcctcgacatggtgccaaacaagtgctgttacagggaggatttctgctaaacaccctaac
ttccaggctttaccgaagcagccacttcaaatcaccaagaagctcttcgtccatggaggc
gcggaggaggtggtgactgttcatcccagggccatgtttgttcctcacaagggatggact
tttcttgctgcagacttctgccaggtggagctgcgtctgcttgctcacttctcatctgac
cctgacctgctccacctttttaccatcccacaggctgacgtcttcaccatgctagcagct
cagtggaaagggttaaacatggaagatgtgagttctgaggacagggaacatgctaaacgc
atcatttactctgttatttatggagcaggtcgtgagcgtctgtcaggaatattgggggtc
agtgctgagcaggctagccagttccaacaccgtttcctccaaacctacagagatgtccag
acctttatccagaaaaccatccagcagagccacaaacagggatacgtgctttccattatg
ggtcgccgtagaaaccttcccgacattaactccccagactggggggtacgcatgcagtct
gagagacaggctgtcaactttgttgtgcagggttcagctgctgatctctgtaagatggcc
atgatcagaatttttaacctggtttccacttccagctcactcactgccaggcttgtagcc
cagctccacgatgagcttctctatgaagtagaagactcccagctggaaccgtttgcaact
ctggtgaaaagcacaatggagtcccttcagcacattgatcatctaggggtccatcttaaa
gtccccctgaaggtggcagtctccagcggaaagacttggggatccatgtctgaatttaac
atccctctaatgcccccctcctcttaa
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