Oryzias latipes (Japanese medaka): 101173332
Help
Entry
101173332 CDS
T02443
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ola03400
]
101173332 (ascc3)
Enzymes [BR:
ola01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
101173332 (ascc3)
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
101173332 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
ResIII
Helicase_C
AAA_22
AAA_19
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
101173332
NCBI-ProteinID:
XP_023819942
LinkDB
All DBs
Position
16:complement(9653964..9685331)
Genome browser
AA seq
2192 aa
AA seq
DB search
MSPPRLTGALRSFSNVSRKEDLSEQLFDLKDKRLKKQLLFAKEGLSWQKISRFCTEHQDK
SKVQAARQELKNLLHAASLVVGAGHDQEAVESAAVFLFETFHNKDHVGTEETRAIKQMFG
PFPSSAAETSCACVARLVAPFPESRVQDFIRNQNRCLRHQRTTFGHNITFSYDCYTLEPL
VELPSSGLHHDALRGDLLNFFSNQHSWKKDSDGESSEKSSISEDASVLRSEVEKYLKRGN
MISSSLEELCSSLFEMLTSPRSDDELQNELFELLGPDGLETISALLKYRTSIVNSLRSSM
YDRTALPPDVCRNLSGEGTKPAYGCQVTILSEKEKQMLKMYRREEKKEKKRSRGTDDADS
SDVLTLEPREMRAQREQALLTARTEPLLTRDRVYERIRYPNVYDCYAEATKAPAFVGGAR
LLLPEGIRRENNKMCEEVEIPPNDPMPVGFEEKPVYISELDEIGQLVFKGMKRLNRIQSI
VFETAYNTNENLLICAPTGAGKTNIAMLTVLHEIRQHLQPGGVIKKDEFKIVYVAPMKAL
AAEMTNYFSKRLEPLGITVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRKSVGDVSLS
QIVRLLILDEVHLLHEDRGPVLESLVARTIRQVESTQSMIRILGLSATLPNYLDVATFLH
VNPYIGLFFFDGRFRPVPLGQTFVGIKTTNKIQQIHDIEEVCYNKVLEQVKAGHQVMVFV
HARNATVRTAMALIEMAKNHGEICFFQTDQGSDYGQCEKQVQRSRNKQMKEMFPEGFGIH
HAGMLRSDRSLMESLFSKGYLKVLVCTATLAWGVNLPAHAVIIKGTQIYDAKRGAFVDLG
ILDVMQIFGRAGRPQFDKFGEGTIITTHDKLSHYLTLLTQQNPIESQYLSSLADNLNAEI
ALGTVTNVEEAVKWLSYTYLYVRMRANPLAYGINHKAIQMDPTLELFRTELVVESGRRLD
KAHMIRFEERTGYFASTDLGRTASHFYIRYNTIETFNELFSSQNTEADILNIVSKAEEFE
QLKVREEELEELDQMQVNFCELLAAGGVENSYGKVNILLQTYISRGDVDSFSLISDLSYV
AQNAARIMRALFEIALRKRWPAMTYRLLTLCKVIDKRLWGFAHPLRQFPNLSHIVLNRLE
EKKLTVDKLKEMRKDEIGHMLHHVNIGLTVKQCVHQIPSILMEASIQPITRTVLRVRLMV
TPDFRWNDQVHGSVGEPWWLWVEDPINDHIYHSEYFLLQKKQVVSKEPQHVVFTIPIFEP
LPSQYYIRAVSDRWLGAEAVCIINFQNLVLPERHPPHTELLDLQPLPVIALRNPEYESLY
KFTHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAEMAMFRVFNKYPSSKVVYIAPLK
ALVRERMEDWKIRIQEKLGKKVVELTGDVTPDVRAIAQADLIVTTPEKWDGVSRSWQNRS
YVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSKSVRVVGLSTALANARDLADW
LGIKQVGLFNFRPSVRPVPLEVHIHGFPGQHYCPRMASMNKPTFQAIRSHSPAKPVLIFV
SSRRQTRLTALDLIAYLATEDNPKQWLHQDEREIEDIIATVRDSNLKLTLAFGIGLHHAG
LHERDRKTVEELFVNCKIQVLVATSTLAWGVNFPAHLVVVKGTEYYDGKSRRYVDYPITD
VLQMMGRAGRPQFDEQGKAVILVHDIKKDFYKKFLYEPFPVESSLLSVLSDHLNAEIAAG
TISSKQDAMDYITWTYFFRRLVMNPSYYSLADTSHESINKYLSNLVEQSLRDLEISHCIE
IKEDERTVEPLTYGRIASYYYLKHQSVGMFKERLRAELLIPELLSILTDAEEYAELPVRH
NEDQLNSQLAQQLPLQVNPHSFDSAHAKTHLLLQAHFSRAQLPCSDYSTDTKTVLDNAIR
ICQAMLDVAANEGWLVTAISICNLVQMVVQGRWLHDSSLLTLPHIEQQHLHLFRKWTKKN
RRGEEEGFTGTIQGLPELIAACNGNESVFTAMVSSEIHSSQAAQTWAFLSHLPMLEVRMS
VKGWWEENQEQMERPVHIVSKNLREDRNWLDIHADQEYVLQVCLHRITVGQQKKKQDGKA
VAPRFPKVKDEGWFLVLGEVDRRELLAVKRVGYVRSRTVASVAFYTPEKPGRYIYTLYVM
SDSYLGLDQQYDLHLNVTPASIAAQVNTEVLD
NT seq
6579 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcctcctcgactcacaggagctcttcgctctttctccaacgtcagcaggaaggag
gatctttctgagcagctctttgatttaaaggataagcgtctgaagaaacagctactgttt
gccaaagaaggcctaagttggcagaagatttcccggttctgcacagagcatcaggacaaa
tccaaagtgcaagctgccaggcaagaactgaaaaatctccttcatgctgccagcctggtc
gtaggagctggacacgaccaagaagctgtggaaagtgccgctgtcttcctgtttgagacc
ttccataacaaagaccatgtgggcacagaggagactcgggccatcaagcagatgtttggt
ccttttccatcttctgcggctgagacctcctgtgcttgtgtagctcgcctggtggctcct
ttccctgaatccagagtccaggacttcatcaggaaccaaaaccggtgtctccgtcaccag
cgcactacttttggacacaatattaccttctcatacgattgttacacccttgaaccgttg
gtggaactacccagctctggtctacatcatgacgctttgagaggagacttactaaacttt
ttcagcaaccagcacagttggaagaaggattctgatggagaatcctcagagaaatcttca
atctctgaagatgcatcagtccttcgtagtgaagtggaaaagtatttaaaaagaggcaac
atgatctcatccagtctggaggagctttgctcctccctttttgaaatgctgacttccccg
aggagtgatgacgagctgcagaatgagctgtttgaactgttggggcctgacggcctggag
acaatatccgcccttctgaagtaccgcacttctattgttaactctctgcgctccagcatg
tatgacagaactgccctaccaccagatgtttgtcgaaacctaagtggggaagggaccaag
ccagcatatggctgccaggtaaccattctgtcagaaaaggagaaacagatgttgaagatg
tacagacgagaagaaaagaaagagaagaagagaagcagaggaacagatgacgccgactcc
tcagatgtgcttaccttagagcccagagagatgagggcccagcgagaacaagcacttctg
acggctcgtactgaacctcttctgaccagggacagggtctatgagcgaatcagatatccc
aatgtctacgactgctatgcagaagctacaaaggcccctgcttttgttgggggagccagg
ttgctgctgcctgaaggaattcgcagagaaaacaacaagatgtgtgaggaggtggagatc
cctcccaatgaccccatgcctgttggctttgaggagaaacctgtctacatatctgaactt
gatgagattggacagttggtgttcaagggaatgaaacgtctgaacagaatccagtccatt
gtgtttgaaactgcctacaacaccaacgaaaaccttctaatctgtgctccaactggggcg
ggtaagaccaacatcgccatgttgactgtcctacatgagatccgccagcatctgcaacct
ggtggggtcatcaagaaggatgaatttaagatagtgtatgtggctccaatgaaggccctg
gcagccgagatgacaaactacttcagcaagcgtctggagcctctgggcatcactgttaaa
gagctgactggagacatgcagctgactaaaggagagatcctgagaacacagatgttggtg
acgactccagagaagtgggacgttgtaacaaggaaaagtgtgggagatgtgtctctctcc
cagattgtccgtctcctgattttggatgaagttcaccttctacatgaagatcgaggacca
gtgctcgagagcctggtagctaggacaatccgacaggtggagtccactcagagcatgatc
aggatccttggcctgtctgctacactgcctaactatctggatgtggccacttttctgcac
gtcaacccctacattggcctctttttctttgacggccggttcagaccggtaccgcttgga
caaacctttgtcggcatcaaaactacaaacaagatccagcagattcacgacatagaagag
gtctgctacaacaaggtgctggagcaggtgaaagcaggtcatcaggtgatggtgtttgtg
catgcgcgaaacgccacagtgaggactgccatggcgctgatcgagatggccaagaaccat
ggagaaatatgcttctttcaaacagaccagggctcagactacggccagtgtgagaaacag
gtccagcgctccaggaacaagcagatgaaggagatgttcccagaaggctttgggatccat
catgctgggatgttgcggtctgaccgcagtctgatggagagcctgttttccaaaggttac
ctgaaggtgctggtctgcacagccaccctggcctggggcgtgaacctgccggcacatgcc
gtcattattaagggaactcaaatctacgatgcgaagcgtggtgctttcgtggacctgggc
atcctggatgtcatgcagattttcggccgtgcgggtcggccgcagttcgacaagtttggc
gagggaaccatcatcaccacacatgacaaactgagtcactacctgaccctgctgacccag
cagaatcccattgagagccagtacctgagcagcctggctgacaacctcaacgcagagatt
gctctgggaactgtcaccaacgtggaagaggctgtgaagtggctcagttacacttacctg
tatgttcgaatgagagcgaacccgctggcttacggcatcaaccacaaggcgattcagatg
gatccgactctggagctgttcaggacagagctagtggtggagtccggcaggagactggat
aaggcccacatgatccgcttcgaagagcgaaccggctacttcgcctccactgacctgggc
cgcactgccagtcatttctacatcagatacaacactatagagactttcaatgagctgttc
agctctcaaaacacagaagctgacattctcaacatcgtgtccaaggcagaggagtttgag
cagctcaaggtgcgggaggaggagctggaggagctggatcagatgcaagttaacttctgc
gagcttctggctgcaggcggggtggaaaacagctacggcaaagtgaacattttactgcag
acgtacatcagccgaggagatgtggacagcttctctctcatctcagacctgtcctatgtg
gctcagaatgctgctcggatcatgagggctctgtttgagatcgctttgaggaagaggtgg
cctgctatgacctaccgactgctcaccctctgcaaagtgattgacaagcggctctgggga
tttgcccaccctctccgccaattccccaacctaagccacatagtgctaaaccgcttggag
gagaagaagctcactgtggacaagctgaaggagatgaggaaggatgaaattggtcacatg
ctccaccatgtaaacattggcttaacggtcaaacagtgcgtgcatcagattccttccatc
ctgatggaggctagcatccagccaatcacacgcaccgttctacgagttcgtctgatggtc
acgcccgactttcgctggaatgaccaggtgcacgggtcagtgggagagccgtggtggttg
tgggtggaagaccccatcaatgatcacatctaccattctgagtactttcttctccagaag
aagcaggtggtctccaaagagcctcagcatgttgtgttcaccattcccatttttgagccg
ctgccctcgcagtactacatcagggcagtgtctgatcgctggctgggggctgaggctgtc
tgcatcatcaacttccagaacctcgttttacctgagagacaccccccccacacagagctg
ctggacctgcagcctttaccggttattgcactgaggaacccagagtatgagagcctgtac
aagttcactcacttcaaccccatccagacccagatcttccacaccctgtaccacacggac
acgaacgtcctgctgggagcccctaccggctctgggaagaccatcgctgcagaaatggcc
atgttccgggtcttcaacaaatatccgtcctccaaggtggtgtacattgcacccctcaaa
gctctggtaagggagaggatggaagactggaagatcaggattcaggaaaagttgggcaaa
aaagtggtagagttgaccggtgatgtgactccagacgtgagagccatcgcgcaggcggac
ctgatagtcaccacgcctgagaaatgggatggagtgagccggagctggcagaaccgcagt
tacgttcagaaagtggccattctcatcatcgatgagatccacctgctgggggaggacaga
ggtccggtgttagaggtcatcgtgtccagaaccaacttcatctcctcccacacgtctaag
agcgtgcgagtggtgggtctgtccacagctctggccaatgctcgagacctggccgactgg
ctgggtatcaaacaggtgggtttatttaatttccgcccgtctgtgcgtcccgttcctctg
gaagtccacatccacggttttccaggacaacactactgtccccgcatggccagcatgaat
aaacccacctttcaagccatacgcagccattcaccagccaagcctgtgctcatcttcgtg
tcatcacggaggcaaacccggctaactgccctggatctcattgcctacctagctactgag
gacaaccccaagcagtggctgcaccaggatgagagagagatagaagacatcatcgccacg
gtgagggactccaacctgaagctgacgctggcatttgggattggcctgcaccatgcaggt
cttcatgagcgggacagaaaaacagtggaggagttatttgtcaactgtaagatccaggtt
ctggtagctaccagtactctggcatggggagtcaactttcctgctcacctggtggtggtg
aagggcaccgaatactacgacggcaaatccaggcgctacgttgattacccaataactgat
gttctgcaaatgatgggccgggcaggtcgccctcagtttgacgagcagggcaaagcggtc
attctggtgcacgacatcaagaaggacttctataagaagttcctgtacgagccgttccct
gtagagtccagcctcctcagtgttctgtcagaccatctgaatgcagagattgctgctgga
accatttcatccaagcaggacgccatggactacatcacctggacttacttcttcagacgc
ctggtgatgaaccccagttattacagtcttgcagacaccagccatgaatccatcaacaaa
tatctgtctaacctggtggaacagagccttcgggacctggagatttctcactgcattgag
ataaaggaggatgagcggacggtcgagcctctgacttacggccgcatcgcttcctattac
tacctgaagcaccagagcgttggcatgttcaaagagcgtctgagggccgagctgctcatc
ccggagttgctctccatcctcacagatgcagaggagtacgctgagctgccagtgagacac
aacgaggaccagctgaacagccagctggcacaacagctccccctgcaggtcaacccccat
tcgtttgacagcgctcatgcaaagacccacctgctgctgcaggcccacttcagccgggcc
cagctgccctgcagcgactacagcacagacaccaaaacggtgctggacaacgctatccgg
atctgtcaggccatgctggatgttgctgcaaatgaaggatggcttgttacagcaataagc
atctgtaacctggtgcagatggttgtccagggccgctggctgcatgactcgtctttactg
acattaccacatattgaacagcagcacctccacctgttcaggaaatggacaaaaaagaac
agaagaggtgaggaggagggcttcactggaacaatccagggacttcctgaattgatcgct
gcttgcaatggaaacgaaagtgttttcacggccatggtcagctcagagatccactccagc
caggctgcacagacatgggccttcctgagtcacctccccatgctggaggtcagaatgagt
gtgaagggctggtgggaggagaaccaggaacagatggagcgcccggtccacatagtcagc
aagaatctgcgtgaggataggaactggttggacatccatgctgaccaggaatacgtccta
caggtgtgcctgcatcggataaccgtgggccagcagaagaaaaagcaggacggaaaggct
gtggctcctcgctttcccaaggtgaaggatgagggctggtttctagtcctgggggaggtg
gatcgcagagagctgctggctgtcaaacgagttggttatgtgcgcagtcgaactgttgca
tctgtggccttttacacaccagagaagcctggaaggtacatctacacgctttatgtgatg
agtgacagctacctgggcctggaccaacagtacgacctgcacctgaatgttacacctgcc
agcatcgcagctcaggtcaatacagaggtgttggactga
DBGET
integrated database retrieval system
