Oryzias latipes (Japanese medaka): 101174117
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Entry
101174117 CDS
T02443
Symbol
rad23b
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03420
Nucleotide excision repair
ola04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101174117 (rad23b)
09124 Replication and repair
03420 Nucleotide excision repair
101174117 (rad23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ola03051
]
101174117 (rad23b)
03400 DNA repair and recombination proteins [BR:
ola03400
]
101174117 (rad23b)
Proteasome [BR:
ola03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
101174117 (rad23b)
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
101174117 (rad23b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
Rad60-SLD_2
Crinkler
Dsc3_N
CUE
Metal_resist
UBA_3
Ubiquitin_5
OTU1_UBXL
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
101174117
NCBI-ProteinID:
XP_004074630
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Position
12:9290660..9296708
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AA seq
395 aa
AA seq
DB search
MLITLKTLQQQTFKIDIDEEETVKTLKERIEQEKGKESFSVAGQKLIYAGKILSDDTALK
EYKIDEKNFVVVMVTKPKTAAPSPKSSSASSSAPSSAPSSAAAAAAPTPPSVADKPAEVA
PADKLEEKESSTAEPPPPPPPARSSESSTDLLSEAVSTLVTGSSYDTMVNEMMLMGYERE
QVVAALRASYNNPDRAVEYLLSGIPGQDQGSRTGPDSTPAVSESPAAPAGGTAAPTSTES
SPSAGGGNPLGFLRNQPQFHVMRQLIQQNAALLPALLQEIGRENPELLQEISNHQEQFIQ
MLNEPNPDPVPGGGGGGGGGGGGGGGARGAGGTGADTSGESQMSYIQVTPQEKEAIERLK
ALGFPEGLVIQAYFACEKNENLAANFLLQQNFDDD
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgctgataactttaaagactttgcaacagcagaccttcaaaatcgacatcgatgaggaa
gaaacggtgaagacgttaaaggagaggattgagcaggaaaaggggaaggagagcttttca
gtggccgggcagaagctgatctacgccggaaaaatcctcagcgacgacacggccctcaaa
gaatacaaaatcgatgagaagaactttgtggtcgtcatggtgacaaagcctaaaactgct
gcgcccagcccaaagtcttcgtcagcctcttcatcagctccttcatcggctcccagctct
gcggctgctgcagcggcccccaccccaccatctgttgcagacaaacctgcagaagtagca
cctgctgacaagctggaagagaaagagtcttccacagccgagccgccgccaccgccgcct
cccgccaggagctcagagtcttcgacagacctgctcagcgaagccgtttccactctggtg
acgggttcgtcctacgacaccatggtgaacgagatgatgctgatgggctatgagagggag
caggtggtggccgctctgagggccagctacaacaaccccgacagagccgtggagtacctg
ctctctggtatcccgggtcaagatcaaggctccagaaccggacccgattccacgcctgca
gtgagcgaatctccagctgcgcctgcagggggcaccgccgctcccaccagcaccgagtcc
tcaccgagtgcaggagggggaaatcctctgggcttcctcagaaaccagcctcagttccac
gtcatgcggcagctgatccagcagaacgccgcgctgctcccagcgctcctgcaggagatc
ggcagagagaacccggagctgctgcaggagatcagcaaccaccaggagcagtttatccag
atgctgaatgagccaaatcctgatccagtgccaggaggaggaggaggaggaggtggcggt
ggtggtggaggaggaggagcgaggggggctggaggcacaggagctgacacttccggagaa
agtcagatgagctacatccaggtcacaccgcaggagaaggaggccatcgagaggctgaaa
gccctgggatttcctgagggactcgtcattcaggcctactttgcatgcgagaagaacgag
aacttggcggccaacttccttctacagcagaactttgacgacgattaa
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integrated database retrieval system
