Osmia lignaria (orchard mason bee): 117602693
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Entry
117602693 CDS
T09775
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117602693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olg03019
]
117602693
Messenger RNA biogenesis [BR:
olg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117602693
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117602693
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
HTH_upst_double_PIN
Motif
Other DBs
NCBI-GeneID:
117602693
NCBI-ProteinID:
XP_034176898
LinkDB
All DBs
Position
Unknown
AA seq
2402 aa
AA seq
DB search
MNLDSLSFTLSQISYLVANLNKKNFRDSCQEISVLVQWKGLEADRHLLRSLLSCIDFSTG
EPPESSAKDYFQVQLLKQECTNLLSKPSFISNLCFAIDHPFHQQKTLNPSPKFFLRLKKV
LGLTLVQEVAFAIALLHSENTEIRTLALEHVKKQLPELIKNYINSETSNKHQEEGLHDSL
PEVLHLILSQAFHSANQFGLSSEAKEKFLKNLRRDFPRELVPVVLAPLLYPDNGETSQAK
IELNMAVNQMDGNSLVELIMELGYGFTSSVDECRSALAGLGAREISPACAARVLAHMARS
YNSLDDAGGLQSFWGNSGATQDANKEKSADSVAPTTWNVEVFIQALKEIQSTLSWNEVIV
KLDHAEFVVKDRQGLSLLITGLRMGLQHQGYPPDMFPVELFYRHWDNVEGQFSLVQQILK
CPDIFCFADYPYHSVTVDVLKAAPESDSKEAQTWRSLNVVELLLHMAERGLYGPVQEIFK
WPIQHCPDVLVLALLQINAPVTILRQELLSTLMPIFLGNHPNSAVILHHAWHGNTVKIKS
IIMHAMAEWYIRGDHDQTRLSRILDVAQDLKALTHLLTAQSYPFVIDLACLASRREYLKL
EKWLTDKIREQGEVFVAACVKFLQRRCPQVMGPGIKEDITVPKASQLPQETLTTMLACLQ
VCAGSVSQECSDAIMTMVQNCSLMLSKSTMSRPPPPGVLRHRGLEPFNPATLGGQLFSSK
QVDPLGNLSSSLASMGLGSSLGPPSSSAFNLPGALGPLVSAPGSPSRLMGPSPSPFPMLP
LSSQLHSGPVGTQGPSVLPGSTTIGGLGRLGPPTGIEKARIPETSNLFPDMSQNVSKEIE
DEANSYFQRIYNHPPHPTLSIDEVLDMLKKFQDSGSKREREVFNCMLRNLFEEYRFFPQY
PDKELQITAQLFGGIIERGLVNSYMTLGLALRFVLDALRKPEGSKMYYFGITALDRFKSR
LKDYQTYCEHVRAIQHFSEFPPHLIEYIEYGLQGQEPPTRPQGPVLPKTLAAMLAPVTTP
YKTITTTTITTSTTQAKSSTTPTTSLSARPSIANATNIDTLLVATDKEEKITSPPEALQD
KTAFIFNNLSQLNLQQKCDEIREIVTEEYWPWMAQYLVMKRASIELNFHALYSNFLDCLK
LPEVNKMVTRETFRNIKVLLRSDKGIANFSDRSLLKNLGHWLGMLTLGRNKPILQIDIDL
KSLLVEAYHKGQQELLYVVPFVAKVLESCAKSRVFRPPNPWTMAIMNVLAELHQEPDLKL
NLKFEIEVLCKNLSIDVGELKPALYLKDPEKLRNLEYQLSHPNKKSESNNNQQQTQGPIE
ELVGSTTTGTIVPQTAPANTTPSLPTGPPEPRFNYMDISVTGIANISQHITINNQLPLFQ
THPHLKQFVRPAVERAIQEWIHPVVDRSIKIALTTSEQIVRKDFALDPEEVRMRTAARHM
VRNLTAGMAMITCRDQVMASISTNLKQAFLTAMMGTTPQQKELAEQAANVVAADNMELAC
AFVQKTAIEKAIPEMDKRLLNEIELRKIARQEGRRYCDPLAKYQAERMPEQIRLKVGGVT
AQQMAVYEEFARNIPGFLPLSERDTQALLMPKPVTEPTVTAFAANPAVAVATAQQVAAYA
AAVSNDEVGAMLEKLAAEVEVLLAAMGPAVPPPQHAALHSLLESIILTRRSRDAGAAMTL
LKKAVEGLLDGPSISSGVIDSEIILRYRELHLRILKCLQDPRAYGMQWTNKHVTRCLTEC
REEFRYNFEAVDYLIRSHLISLPQYDLALAQAIDSGNAMATAFAMQLVQLYLIDERQTTH
VTESDLFHTIEILARMAHHRAPPEGILLFRLTSLIESLRANHDPGVLADRAPAGPTAHIH
SGILQVRARDFDDPPGLMEKTEYLLREWVSMHHSPTHARDPTKAFGMFVHQMNIHGILKT
DDLITRFFKLSTQMCVDLCYRALSETSAAPSVVRAKCFHSLDAFVRLVALLVKHSGDSTN
THTKINLLNKVLGIVAGVLLQDHEIRGTDFQQLPYHRIFIMLFLELCAPEPVLEAVNYQV
LTAFCHTLHILRPAKASGFCYAWLELVSHRVFIGRMLAITPQQKCWGMYAQLLIDLFKYL
APYLRNAELAKPVTLLYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQMRNLILSA
FPRNMRLPDPFTPNLKVDMLQEIAHAPRVLTNFASMIQPLSFKKELDSYLKARAPVTFLS
ELRSNLQVSQEAGVRYNIQLMNALVLYVGTQAIAYIRSKGHTPNMSTIAHSAHMDIFQNL
AVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTLLYLFAEANTEAIQEQITRVLLERLIV
NRPHPWGLLITFIELIKNPTYKFWTHEFVHCAPEIEKLFESVARSCMVQKQVQPTPEPDI
PE
NT seq
7209 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggactcgttgtcttttactttgtcacaaatcagttatttggttgcgaattta
aataagaaaaattttcgggacagctgccaagaaatatcagttctggtgcagtggaagggt
ttggaggcagacagacatttgctgcgctctttgctgtcgtgcattgacttttcaacagga
gaaccaccagaatcaagtgcaaaagattattttcaagtgcaacttctgaaacaagagtgt
actaatcttcttagcaaaccttcttttatttctaatctgtgctttgctatagatcatcca
tttcatcaacaaaagactttgaatccatctccaaagttttttttacgtttgaaaaaggtc
cttggcttaactctggtacaagaagttgcatttgcaattgcattattgcattctgagaat
actgaaattcgtacattagctctagaacacgtaaaaaagcagttgcctgagttaataaaa
aattatattaattctgaaacaagtaataagcatcaggaagaaggattgcacgattcgttg
cctgaagttcttcatctgatattgtctcaggcttttcattcagccaatcaatttggcctt
tcatcagaagcaaaagaaaaatttctcaagaatttaaggcgcgactttccccgtgagctg
gtaccagtggtgttagcaccactcctgtacccagacaacggggaaacttcgcaagccaaa
attgaattaaacatggctgttaatcaaatggatggaaattctttagtagaattgattatg
gaattaggatatggattcactagtagcgttgacgaatgtcgttcagccttagctggccta
ggagctagagaaatatctccagcatgtgctgccagagttttggctcacatggcacgtagt
tataatagtcttgacgatgctggaggtttacaatcattttggggtaattcaggagcaaca
caagatgcaaataaagaaaaatcagctgatagtgttgcacccactacatggaatgttgaa
gtctttattcaagctttaaaagaaattcaatccacactatcatggaatgaagtaatagtt
aaattggatcatgcggaattcgttgtcaaagatagacaaggattgagtttgttaatcaca
ggactgaggatgggtttgcaacatcaaggatatccacctgatatgtttcctgtggaactt
ttttatcgtcactgggacaatgtagaaggacaattttctttagtacaacaaattctaaaa
tgtccagatatattttgttttgccgattatccatatcattctgtaactgttgatgttttg
aaagcagcaccagaaagtgacagtaaagaagcacaaacatggagatctttaaacgtagtt
gaattacttctacacatggcagaaagaggactgtatggaccagttcaagaaatatttaaa
tggcccattcagcactgtcccgatgttcttgtactagcgctattacaaattaatgctcct
gttactatactaagacaagaattacttagtacattgatgcctatttttctcgggaatcat
ccaaattctgccgttatactgcatcatgcgtggcatgggaatacagttaaaataaaatct
atcattatgcacgccatggcagaatggtatatccgcggagatcacgaccaaacaaggcta
tctcgtattcttgacgttgctcaggaccttaaagcgttaactcatttacttactgctcag
tcatatccatttgttattgacttagcctgtttggcctccagaagagaatatttgaaatta
gagaaatggttgacggataagattagagagcaaggagaggtttttgtcgccgcttgtgta
aaatttttacaaagacgttgccctcaagtgatgggtcccggaataaaggaagatattacg
gttccaaaggcgagtcagcttccacaggagacgttaacaactatgcttgcttgcttgcaa
gtgtgtgctggaagtgtttctcaagagtgttccgatgcaataatgacaatggtacaaaat
tgtagtctaatgttgagcaaaagtacaatgagtagacctccacctccaggagttttaaga
cacagaggactagaaccttttaatccagcgacattagggggacagctgttctcttcgaaa
caagtagacccgcttggaaatttgagttcaagtcttgcatctatgggtttgggttccagt
cttggaccaccaagcagttctgcattcaatttacctggcgctttgggacctttagtatca
gcacctggttctccttctcgtcttatgggaccttctccaagtccatttccaatgttacca
ttatcttctcagctgcattcaggaccagttggtactcaaggaccatctgttttacccggc
agtacaacaattggaggattgggtcgactgggaccacccacgggcatcgaaaaagcaaga
atacctgaaacgtcaaacttatttcctgatatgtcacaaaatgtttccaaagaaatcgaa
gatgaagcgaatagttattttcaacgtatatacaatcatccaccacatccaacattgtcg
atcgacgaagttcttgatatgttgaaaaaatttcaagattctggtagtaaaagagagaga
gaagtattcaactgtatgttacgaaatttattcgaggaatatcggttttttcctcaatac
cccgataaagagttacaaatcacggcacaattgttcggaggaattattgaaagaggattg
gttaatagttacatgacacttggattagccttaagattcgttttggatgccctcaggaaa
ccagaaggcagcaagatgtattacttcggcataacagctctggatcgtttcaagagtcgt
ttaaaagactaccaaacatactgtgagcacgtcagggcaattcagcatttcagtgagttc
ccaccacatttaattgagtacatagaatatggattacaggggcaggagcctcccacaaga
cctcaaggtccagtcctcccaaaaactttagcagctatgctggcacctgttactactccg
tataaaactattacaacaacaacgataacgacaagtaccactcaagcaaaatcatctaca
actccaactacatctctctcggcaagaccttccattgctaatgcaacaaacattgatacg
ttattggtagcaacagataaagaagaaaaaattacatcgcctccagaagctttacaagat
aaaacagcattcatctttaacaatcttagccagcttaatttacaacagaaatgtgatgaa
attcgagaaattgtcacagaagagtattggccttggatggctcaatatttagtgatgaaa
cgtgcaagcatagaattaaattttcatgctttatattcaaactttctggactgtttaaaa
ttacccgaagtaaataaaatggttactagagaaacgtttagaaatataaaggttttatta
cgaagtgataaaggaatagcaaatttttcagatcgatcgttactcaaaaatttgggtcat
tggttaggaatgttaacacttggcagaaataagcctattttgcagatcgatatagatttg
aaaagtttactcgtcgaagcatatcataaaggtcaacaggaactcctttatgtagttccc
tttgttgctaaggtacttgaaagctgtgcgaagagtcgtgttttccggccaccaaatcct
tggacaatggcaattatgaatgtgctggcggaattgcatcaggaacctgatttaaaattg
aatttgaaatttgagatcgaagtgctttgcaaaaatttaagtatcgatgttggtgaatta
aaaccggcactttacttgaaagatcccgagaagttacgaaatttagaatatcagttgtcg
catcctaataaaaagtctgaatcaaataataatcaacaacaaactcaaggtccaattgaa
gaattagttggatctactacgactggtacgattgttccacaaacggctccagcaaataca
acaccatctttaccaactggtccaccagaaccacgattcaattatatggatatatctgta
acaggcattgctaatatatctcagcacattaccattaataaccaactaccgttgttccaa
acgcacccacacttaaaacaatttgttcgtccagcggttgaaagggcaattcaagaatgg
attcaccctgttgttgaccgttcaattaagatagctctgactactagtgaacaaattgta
agaaaggactttgcattagatccggaagaagttcgaatgagaacagcagcaagacacatg
gttcgtaatttaaccgctggaatggctatgatcacttgccgtgatcaagttatggcgtcg
attagtacaaatttaaaacaagcttttctaaccgcaatgatgggtacaacaccgcaacaa
aaagaacttgcggaacaagcagctaatgtagttgccgctgacaatatggaacttgcctgt
gcatttgtacaaaaaacagctattgaaaaagctattcctgaaatggataaacggcttcta
aatgaaattgaattgcggaagattgcacgtcaggaaggaagaagatattgcgatcctttg
gctaaatatcaagccgaaaggatgcctgagcaaatcagactaaaagtaggcggagtgaca
gctcaacaaatggctgtttatgaagaatttgcgagaaatattccaggatttttaccactt
tctgaacgagatacacaagctttgttaatgccaaaacctgttacagaaccgactgtaact
gcattcgccgctaatccagcagttgcggtggcaacagctcaacaggtagctgcatatgca
gccgcagtgagtaacgatgaagttggagcaatgttagagaaacttgcagctgaagttgaa
gtattacttgccgccatgggcccagctgtacctcctccacaacatgctgcccttcatagt
cttttagaatctattattcttacacgaagatcgagggatgcaggtgctgctatgacgttg
cttaaaaaagccgtagaaggattgttagatggtcctagtatttcgagcggtgtaatagat
tccgaaattatattacgatatagagaacttcatttacggattctgaaatgtcttcaagat
ccacgtgcttatggtatgcagtggacaaataaacacgttactcgttgtttaacagaatgt
agggaagaatttcgatacaattttgaggctgttgattatcttattagatctcatttaatt
agtcttccacagtatgacttagcattggcccaagctatagattctggaaatgctatggca
acagcatttgccatgcagttggtgcagctttatttaattgatgagagacagactacacac
gttaccgagtctgatttattccacacaattgagatactagccagaatggctcatcataga
gcacctcctgaagggatcttattattcagattaacgagtttgatagagtcattacgcgct
aatcatgatcctggagtattagcggacagggcacctgctggacctacagcacatattcat
tctggaattctacaggtgagagcacgtgattttgatgatccacccggattgatggaaaaa
accgagtatttattacgcgaatgggtttcaatgcatcatagcccaacgcacgcacgtgat
cctacgaaagctttcggaatgtttgttcatcaaatgaatattcatggaatccttaagacc
gacgaccttataacaagattcttcaaattaagcactcaaatgtgtgttgatctgtgttat
cgtgctttatccgagaccagtgcagctccatccgttgttcgtgcaaagtgtttccattcg
ttggatgctttcgttcgcttggttgcgcttttggtcaaacattctggtgacagtacaaat
acccatacgaaaattaatttactaaataaggtattggggatcgttgccggtgtattatta
caagatcatgaaatacgaggcaccgatttccaacagttgccctatcacagaattttcatt
atgctcttcttagagctttgtgctcctgagccagtattggaagcagtcaattatcaggta
ttaactgctttctgccatactttacacatacttagaccagccaaagcttcaggcttttgc
tatgcttggttagaattggtttcgcatagggttttcattggacgcatgctcgcaattaca
ccgcaacaaaaatgttggggtatgtatgcgcaattattaattgacttattcaaatatctc
gcaccctatcttcgaaatgctgaactcgcaaaaccagtcactttattatacaaaggtact
cttagagtattgctggtcttattgcacgattttcctgaatttctttgcgactatcattac
ggattttgtgatgtaattccaccgaattgtatacaaatgagaaatcttattctaagcgca
ttcccaaggaacatgcgtttaccagatccattcacaccaaatctaaaagttgacatgcta
caagaaatagcacatgctcctcgagtattgactaattttgcatctatgatacaaccgctt
agtttcaagaaggaactcgattcatatttgaaggcgcgtgcaccagttactttcctttct
gaattacgcagtaatttacaagtatctcaagaagctggtgttcgctataatattcagtta
atgaatgctcttgtactctatgtaggtacacaagctatagcttatattcgcagtaagggg
catactcctaatatgtctactatcgcacattctgcacatatggacatattccaaaactta
gcagttgatctcgacacagaaggtcgttatttgtttttaaacgcaattgcaaatcaactt
cgatatcctaacagccatacacattactttagttgtacactcctgtatttgtttgctgaa
gctaataccgaagcgatacaggaacagattacgagagttcttctcgaaagacttattgtg
aatagacctcatccatggggtcttttgataacatttattgagcttataaaaaatccaacg
tacaaattctggacgcacgagtttgttcattgtgcaccagaaattgaaaaattatttgaa
tcagtggctcgttcttgtatggttcaaaaacaagtacagcccactccggaaccggatatc
cctgagtga
DBGET
integrated database retrieval system
