Ostreococcus lucimarinus: OSTLU_27364
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Entry
OSTLU_27364 CDS
T01029
Name
(RefSeq) predicted protein
KO
K12821
pre-mRNA-processing factor 40
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
OSTLU_27364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
olu03041
]
OSTLU_27364
Spliceosome [BR:
olu03041
]
Complex A
U1 snRNP components
U1 related factors
OSTLU_27364
Complex B
OSTLU_27364
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
ImpA_N
Motif
Other DBs
NCBI-GeneID:
5005403
NCBI-ProteinID:
XP_001421217
JGI:
27364
UniProt:
A4S762
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All DBs
Position
14:142900..144528
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AA seq
542 aa
AA seq
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MSEAQTERADARTATREAQTLRHPEGHLEREATTAATTAWETHVAPDGRTYYYHPETRRS
TYAKPEEMMTTMERAEAATRWRKFTAPAADSTGAMKTYWAHEDTGVTTWETPKEIEEVRE
IVRRAEARATGPGGRGTGAGRAESRNESGRASGEDAAPFAKEYASMEEAKQAFKKMLAEY
GVRGSTKWDEVVNRAGADARFSALRSTGEKKQCLNEYQMAQAKIEREAKRMAEKKAREAF
RAMLEEHGEALGLTSNSRLSRDGSLEQALRDDARWRAVTDQRERAEIFEDYTRDLRVREK
HEREHTKTKRASEFRECLIEAGATSEMTWRKIYEVVKDDPRCERCEPLARLDVFESIVRD
LARAERAKLEVERKAKAREERKRREDFVALLAESQADGIITPRMPWKSFVKRIENDERYV
RLCQNLDGSRPRELFEDLIDEIEGEIDRKLDDFEDLLRDGYKARELHGNTTWEKAEKLYR
HDKAWKQAPRDEARKLFVKFIAKVFRREQEKERRKREGIRSEDDADRPSSRKKSRRDRSA
SR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaggcgcagaccgagcgcgcggacgcgcgaacggcgacgcgggaggcgcaaacg
cttcgtcatccagagggacatcttgaacgagaggcgacgacggcggcgacgacggcgtgg
gaaacgcacgtcgcgccggatgggcgaacgtattactatcacccggagacgcggcggagc
acgtacgcgaagccggaggagatgatgacgacgatggagcgcgcggaggcggcgacgcgg
tggcgaaagtttacggcgccggcggcggactcgacgggagcgatgaagacgtattgggca
cacgaggacacgggagtgacgacgtgggagacgccgaaggagattgaggaggtgagggag
atcgtgcggcgagcggaggcgcgggcgacggggccgggaggtcgaggaacgggagcgggg
cgcgcggagagtcgaaacgagagcggacgagcgagcggcgaggatgcggcgccgtttgcg
aaggaatacgcgagtatggaggaagcgaaacaggcgtttaagaagatgctcgccgagtac
ggcgttcggggatcgacgaagtgggatgaagtggtgaatcgagctggggcggatgcgcgg
ttttcggcgctgcggtcgacgggggagaagaagcagtgtttgaatgagtatcagatggcg
caggcgaagatcgagcgcgaggcgaagagaatggcggaaaagaaggcgcgcgaggcgttt
agagcgatgctcgaggagcacggagaagcgttgggcttgacgtcgaattccagattgtcg
cgagacggatcgctggagcaggcgctgcgggacgacgcgcggtggcgcgcggtgactgat
caacgcgaacgtgcggaaatatttgaagactacacgcgagatttacgtgtgcgcgaaaaa
cacgagcgcgagcacacgaaaacgaagcgtgcttcggagtttagggagtgtttgatcgaa
gctggcgcgacgtcagagatgacgtggcgaaagatttatgaagtcgtcaaggacgacccg
cgatgcgagcgatgcgaacctttggctcgtttggatgtgttcgaaagcatagtgcgtgat
ttggctcgcgcagagagggccaaactcgaagtcgagcgcaaggccaaagcgcgcgaagag
cgcaagcgtcgcgaagactttgttgcgctgctcgccgagtcgcaagccgacggcatcata
acgccacggatgccgtggaagtcgttcgtgaagcgcatcgagaacgacgagcgatacgtc
agattgtgtcaaaacctcgatggatcgcgaccgcgcgagttatttgaggatttaatcgac
gagatcgagggcgagattgatcgaaagttggacgattttgaagacttgctgcgcgacgga
tacaaggcgcgcgagttgcacggcaacacgacgtgggaaaaggcggagaagctgtacaga
cacgacaaggcttggaagcaagcgcctcgggacgaggcgcgtaagctgtttgtgaagttt
atcgcgaaagttttccggcgtgagcaagagaaagagcgccgtaagcgcgagggcattcgc
agcgaggacgacgcggacaggccgtcgtcgcgcaaaaagtctcgtcgcgatcgtagcgcg
agtcgatga
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