KEGG   Ostreococcus lucimarinus: OSTLU_32751
Entry
OSTLU_32751       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K12604  CCR4-NOT transcription complex subunit 1
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    OSTLU_32751
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:olu03019]
    OSTLU_32751
Messenger RNA biogenesis [BR:olu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     OSTLU_32751
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     OSTLU_32751
SSDB
Motif
Pfam: Not1 CNOT1_CAF1_bind CNOT1_TTP_bind DUF3819 CNOT1_HEAT
Other DBs
NCBI-GeneID: 5002884
NCBI-ProteinID: XP_001418748
JGI: 32751
UniProt: A4S0H7
LinkDB
Position
7:571156..576612
AA seq 1818 aa
MGDGSSKGDVDAQRLASVASTAEAMEELGYACAHAKDSLIEILGKLPKLDDAGLAKVVGM
IARTSSGKLETSRGEAALVSLAKSAGIAAPSAEALRLTTWNGDVVVDAVNATYKDLNWEN
AMEKLDQPEFGCPDASSFQLICDMYSRATGKSFPAKALCAAPWGKNQAGQIEALRQLLGS
PQESCDWGSLKHVDVEGTLAGPWGCLDLMSTLCSLSETGHRDAARGALEPGAGRSPETVC
ITLAQVCDEHNALARDAFGALLPPYVATSHPKSGLVLSNVWGRHSVAVIRAMVDAHTSSP
AAADRIFDVCQELNALQVIIDRSPFPLAIEMVSIASVRAGVNLEQWLQEKIKANGGAFVS
ACMRFLRAKATQEGGDKGATPLKPEVLQTFLKVLQGAQQTMPPDLQAELRQLVAQIQNSP
NKGRDSSAASDDLSVQAGTAQGFTPDVEEEANRYFQRVYSMQQSIGELVEVLRAFRVSQV
QRERDVFSCMVHNLFDEYKFFPKYPEKELRITAVLFGQLIFHNLVSNITLGVALRCVLDA
LRKPQGSKMFAFGSDALEQFKRRLTEWPQYCQHLAQIPNLAQAHPDLLHLFSKGNDQTVA
LGRSEPSMNTAANADAQLAAGVAGMRIGGGDSGGEGNHPPLPRSLSSGMNLPPQPPGPPP
AGESAPAPAASRLTTRGMSTPEIGQIARVSSGGQIAAAASGAPSGFATSLNIDTLVAASA
EAKQPDAATADKVHFLVNNLSAENMEEKAAEVKSKVSADLYEWFAGYLVVKRASIEPNYH
ALYLELLEKVGDKNLYAAILQATYRNIKVLLSSGKVKTNSGERSLLKNLGSWLGQLTISK
RKPVLQRDLDLKELILESYESGRMIGVVPFVAKVLEPAKDNMIFKPPNPWTVAILSLLCE
IYNERDLKLNLKFEMERLFKHLDVNIKDIEPSMLLASRMRERQNNPDFVADKNFAAPVPL
QSAASEGSLQQHGVVGRSMDEEEKTRLQTQSLEGALPNMQAHVRVAAAPNLPESTRAALL
RLLPVALTQGIREIVAPVVERSVTIACKTSQELVRKDFATEADINRVRKAAHLMVSSLAG
SLALVTCREPLKASVANQLRALLQQSGAGAGSEASALEAAVQSATVDNLELGCALIEKAA
SEKAIRDIDESLAAAVIVRQKHRESGINQPFFDAAIMQGRYPAALPESLRPRPGQLPTAA
LRIYDDFAQLPRAPSGPPPPSGAPPAFARQPPFGQPQPPPPPVAYPGMPPPPPPGAPPPL
PPDVPSEGVADGAQDAGKDSAKGPPSGAHPHGQPDPAGLREKVAAHFDEWARVQDLPVTD
AANVAFMQRLVESRLLAEDTQERFLRILVELAVTHCLGSEVPSATPQASSQLSFAAIDAY
VRLVTRLVRRQEEPLASRLAFFGRALVAVVRTAMRDTDERNVAFNARPYFRALAGLLNEM
HAPDNALDSSHPQVLAAFASAFLALQPLRVPGFAFAWLELVSHRCFMPRLLIDHEQKGWP
LLQRLLTAILRFMEPHLRTADLSEPIKLLYKGMLRMFLVLLHDFPEFLCNHHVNFCDIIP
PNCIQLRNLVLSAYPRNMRLPDPFTPNLKVDLLPETQQAPRINADADHAFRSSPMREEVD
AFLTTRKSENLSQQLIHRLMLSPSAALAAGTKYNVPLINAFVLYVGVQAIQANRSKDASS
GIAQSAPMELFSQLIESLDMEGRYLFVNAIANQLRYPNCHTHYFSCVILFLFSEAKFAII
QEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWGHAFTKCSPEIERLFESVARSC
LPQQDKEGVPKPSPVPAS
NT seq 5457 nt   +upstreamnt  +downstreamnt
atgggcgatgggtcgtccaagggagacgtggacgcgcagaggttagcgtcggtggcgtcc
acggcggaggcgatggaggagctcgggtacgcgtgcgcgcacgcgaaagattcattgatt
gaaattctagggaaattgccaaagttggacgacgcggggttggcgaaagtggtcgggatg
atcgcgaggacgagctctgggaagttagaaacgtcgaggggggaggctgcgttggtgtcg
ttggcgaaaagcgccgggatcgcggcgccgagcgcggaggcgttgcgattgacgacgtgg
aacggggacgtcgtggtggacgccgtcaacgcgacgtataaggatttaaattgggagaac
gcgatggaaaagctcgatcaacccgagtttggatgtccggacgcgagttcgtttcagttg
atctgcgacatgtactcacgagcgactgggaagagcttcccggcgaaggctttgtgcgcg
gcgccgtggggaaagaatcaggcgggtcagattgaggcgctgcgacaactcttaggttcg
ccgcaggagtcgtgcgattgggggagtttgaagcatgtcgacgttgaagggacgttagcg
gggccttgggggtgtttggatttgatgtcgacgctttgctcgttgagcgaaaccggacac
cgagacgcggcgaggggggcgctcgagccgggcgccgggcggtctccggagacggtgtgc
atcactctcgcgcaagtttgcgacgaacacaacgcgctcgcgcgcgatgctttcggtgcg
ttattgcctccgtacgtggcgacgtcacaccctaagtcggggttggttttgagcaacgtg
tgggggcgtcactcggtggcggtgattcgcgccatggttgacgcgcacacgtcatcaccg
gccgcggccgatcgtatctttgacgtttgtcaagagttgaacgccttgcaagttatcatc
gatcgatcgccgtttcccttggcgattgagatggtttctatcgcctccgtccgcgcgggc
gtaaacttggagcagtggctgcaagagaagatcaaagccaacggtggcgcgtttgtgagc
gcgtgcatgcggttcttgcgcgcgaaggcgacgcaagagggtggagataagggtgccacg
ccgctcaagccagaggttttgcagactttcttgaaggttttacaaggcgcgcagcagacg
atgccgcccgatttgcaggcggagcttcgccaactcgtcgcgcagattcaaaactcgcca
aacaaaggtcgagattcgagcgcggcttcggacgatttgtccgtgcaagccggcaccgcg
caaggtttcacgccggacgtggaagaagaggccaaccgctacttccagcgcgtgtattct
atgcagcagtccatcggggagttggtcgaggtgctgcgcgctttcagagtgagccaagtg
caacgcgaacgcgatgtgttctcgtgcatggtgcacaacttgtttgatgaatacaagttc
ttcccgaagtatccagaaaaggagttgagaatcacagctgtgctcttcggtcagctcatc
ttccacaatctcgtgagtaacatcactctcggcgttgctttgcgttgcgtcttggacgcg
cttcgcaagccgcaaggatcaaagatgtttgccttcgggtcggatgctctcgagcaattc
aagcgtcgactcactgagtggccacaatactgccagcacttggcgcagattccgaatctc
gcgcaggcacaccctgatttgttgcacctattctctaaaggtaacgatcaaaccgtggcg
ctcggtcgaagcgaaccgagcatgaacaccgcggcgaatgccgacgcacaacttgccgct
ggagtcgcgggaatgcgtatcggtggtggcgacagtggaggtgaaggaaaccacccacct
ttacctcgatcactgtcttccgggatgaacttaccgcctcaaccaccgggacctcctcca
gcgggagagtcggcgcccgcgccggcggccagtcgtctgacgacacgcggtatgagtacg
ccagagattggtcagatcgctcgcgtgtcgagcggtggacaaatcgccgcggcggcatcc
ggtgcgcccagcggcttcgctacgtctttgaacatcgacaccttggtcgccgccagcgcc
gaagcaaagcagccagacgcggcgacagcggacaaggttcactttttggtgaacaatctg
tcggcggagaacatggaagaaaaggcggctgaagtcaagtccaaggtgagcgcagatctg
tacgaatggtttgccggttatctcgtggtgaagcgtgcgtcgattgaaccaaactaccac
gcgctttacctcgagcttctcgagaaggttggcgacaagaatttgtacgccgcgattttg
caggccacgtaccgaaacatcaaggttttgttgtcaagcggtaaggtcaagacgaacagc
ggcgagcgcagcttgttgaagaatctcggctcgtggctcggtcaactcaccatctcgaag
cgtaagcccgtgcttcagcgtgacttggacctcaaggagctgattttggaaagctacgaa
tccggtcgcatgatcggcgtcgtgcccttcgtcgccaaggtgctcgaaccggctaaagac
aacatgatctttaaaccgccgaatccttggacggtggccattttgtcgttgttgtgcgaa
atctataacgaacgcgacttgaagctgaacctgaagtttgagatggaacggctgttcaag
catttggacgtcaacattaaggacatcgagccttcgatgttgctcgcgtctcgaatgcgc
gagcgccaaaacaaccccgactttgtcgcggacaagaattttgcagcgccggtaccgttg
caatcggccgcatcagaagggtcgcttcagcagcacggcgttgtcggtcgtagtatggat
gaggaagagaagactcgtttgcaaacgcaaagcctcgagggcgcgttgccaaacatgcaa
gctcacgtgcgcgtcgcggcggcgccaaacttgccagaatctactcgagccgcgctcttg
cgtctcctccctgtggctttgacgcaaggtattcgggagatcgtcgcgcccgttgtcgaa
cgttccgtgaccatcgcttgcaaaacatcgcaagagttagtccgcaaggatttcgccacc
gaggctgacatcaaccgcgtgcgcaaggcggcgcatctcatggtgtcttcgctcgccggc
tcgctcgccttggtgacttgccgagagcctctcaaggcgagtgttgcgaatcagcttcgt
gcgcttttgcagcagtcaggtgccggcgccggctcggaggcatccgccctcgaagccgcg
gtgcaatctgcgacggttgacaatctcgaattgggttgcgcgctcattgaaaaggcggcg
tccgagaaggcgattcgagacatcgatgaatctctcgccgcggctgtgattgtgcgtcaa
aagcatcgtgagtctggtatcaatcagccgttctttgatgcggccatcatgcaaggtcga
tacccggcggcgcttccggagtcgctcagaccgcgacctggacagctccccaccgccgct
cttcgcatctacgacgactttgcgcagcttcctcgcgcaccgtcgggaccgccgccgccc
tcgggcgcgccgccggctttcgcgagacagccacctttcggacaaccacagccaccgcca
ccgcctgtggcgtatccaggcatgccgccgccgccacctccaggtgcgccgccaccgctg
ccgccggatgttccgtctgagggcgtcgccgacggcgcgcaagacgccggcaaggattcg
gccaagggtcctccgtctggtgcgcatccgcacggtcaacccgatcccgcgggcttgcgc
gaaaaggttgcggcgcacttcgacgaatgggctcgagtgcaagatttgcccgtcaccgac
gcggcgaacgtggcgttcatgcagcgactcgtggagtcgcgtctgctcgcagaggacacc
caagaacgcttcttgcgcatcttggttgaactcgccgtcactcactgtctcggcagcgaa
gtgccgagcgcgacgcctcaagcgagctcgcagctttctttcgctgcgatcgacgcgtac
gttcgcctcgtcacgcgattggttcgtcgtcaagaagaaccgctggcgtcgaggttggca
tttttcggccgcgccttggtcgccgtcgtccgcacggcgatgcgcgacacggatgaacgt
aacgttgcgtttaacgcgcgaccttacttccgcgcgctcgctggtttgctcaacgagatg
cacgccccagataacgccttggactcctcgcatcctcaagttctcgcggcgtttgcctcc
gcttttttggcgttgcaaccgcttcgcgtgccgggctttgcatttgcctggcttgaactc
gtctcccatcgctgcttcatgcctcgtctcttgatcgaccacgaacaaaagggttggcct
ttgttgcaacgattgctgacggccatcctacgcttcatggaaccgcacttgcggacggca
gatctctctgaaccgatcaagttgctgtacaagggcatgcttcgcatgtttctcgtcttg
ctgcacgacttcccggagtttttgtgcaaccatcatgtcaacttctgcgacatcatcccg
cccaactgcatccagttgcgcaacttggtgttgtcggcatatccgcgcaatatgcgacta
cccgatccgttcactccaaacttgaaggtggacttacttccggagacgcagcaagcgccg
agaatcaacgccgacgccgaccacgccttccgctcctcgcccatgcgcgaagaagtggat
gcgttcttaacgacacgaaagtctgagaacctgagccagcaactgattcatcgcttgatg
ttgtctccttcagccgcgctcgcggcgggaacaaagtacaacgtcccgttgatcaacgcc
tttgtgctctacgtcggcgtccaagcgattcaagcaaaccgcagtaaggacgcctcgagc
ggcatcgcgcaaagcgctccgatggagttgttctcgcaacttatcgaatcgctcgatatg
gagggccgatacctgttcgtgaacgctatcgcgaatcagcttcggtatccgaactgccac
acgcactacttctcgtgcgtgattctctttttgttttccgaagccaagttcgcgatcatt
caagagcaaatcacgcgcgttctcctcgaacgcttgatcgtcaatcggccacatccgtgg
ggtttgttgatcacgttcatcgagctcatcaaaaatccgcggtacaacttctggggacac
gctttcaccaagtgctcgccggagatcgagcgactcttcgagtctgtcgctcgctcgtgc
ttaccgcaacaagacaaggagggcgtcccgaaaccttcgccggtgcccgcgtcatga

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