Ostreococcus lucimarinus: OSTLU_32751
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Entry
OSTLU_32751 CDS
T01029
Name
(RefSeq) predicted protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OSTLU_32751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olu03019
]
OSTLU_32751
Messenger RNA biogenesis [BR:
olu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
OSTLU_32751
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
OSTLU_32751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
5002884
NCBI-ProteinID:
XP_001418748
JGI:
32751
UniProt:
A4S0H7
LinkDB
All DBs
Position
7:571156..576612
Genome browser
AA seq
1818 aa
AA seq
DB search
MGDGSSKGDVDAQRLASVASTAEAMEELGYACAHAKDSLIEILGKLPKLDDAGLAKVVGM
IARTSSGKLETSRGEAALVSLAKSAGIAAPSAEALRLTTWNGDVVVDAVNATYKDLNWEN
AMEKLDQPEFGCPDASSFQLICDMYSRATGKSFPAKALCAAPWGKNQAGQIEALRQLLGS
PQESCDWGSLKHVDVEGTLAGPWGCLDLMSTLCSLSETGHRDAARGALEPGAGRSPETVC
ITLAQVCDEHNALARDAFGALLPPYVATSHPKSGLVLSNVWGRHSVAVIRAMVDAHTSSP
AAADRIFDVCQELNALQVIIDRSPFPLAIEMVSIASVRAGVNLEQWLQEKIKANGGAFVS
ACMRFLRAKATQEGGDKGATPLKPEVLQTFLKVLQGAQQTMPPDLQAELRQLVAQIQNSP
NKGRDSSAASDDLSVQAGTAQGFTPDVEEEANRYFQRVYSMQQSIGELVEVLRAFRVSQV
QRERDVFSCMVHNLFDEYKFFPKYPEKELRITAVLFGQLIFHNLVSNITLGVALRCVLDA
LRKPQGSKMFAFGSDALEQFKRRLTEWPQYCQHLAQIPNLAQAHPDLLHLFSKGNDQTVA
LGRSEPSMNTAANADAQLAAGVAGMRIGGGDSGGEGNHPPLPRSLSSGMNLPPQPPGPPP
AGESAPAPAASRLTTRGMSTPEIGQIARVSSGGQIAAAASGAPSGFATSLNIDTLVAASA
EAKQPDAATADKVHFLVNNLSAENMEEKAAEVKSKVSADLYEWFAGYLVVKRASIEPNYH
ALYLELLEKVGDKNLYAAILQATYRNIKVLLSSGKVKTNSGERSLLKNLGSWLGQLTISK
RKPVLQRDLDLKELILESYESGRMIGVVPFVAKVLEPAKDNMIFKPPNPWTVAILSLLCE
IYNERDLKLNLKFEMERLFKHLDVNIKDIEPSMLLASRMRERQNNPDFVADKNFAAPVPL
QSAASEGSLQQHGVVGRSMDEEEKTRLQTQSLEGALPNMQAHVRVAAAPNLPESTRAALL
RLLPVALTQGIREIVAPVVERSVTIACKTSQELVRKDFATEADINRVRKAAHLMVSSLAG
SLALVTCREPLKASVANQLRALLQQSGAGAGSEASALEAAVQSATVDNLELGCALIEKAA
SEKAIRDIDESLAAAVIVRQKHRESGINQPFFDAAIMQGRYPAALPESLRPRPGQLPTAA
LRIYDDFAQLPRAPSGPPPPSGAPPAFARQPPFGQPQPPPPPVAYPGMPPPPPPGAPPPL
PPDVPSEGVADGAQDAGKDSAKGPPSGAHPHGQPDPAGLREKVAAHFDEWARVQDLPVTD
AANVAFMQRLVESRLLAEDTQERFLRILVELAVTHCLGSEVPSATPQASSQLSFAAIDAY
VRLVTRLVRRQEEPLASRLAFFGRALVAVVRTAMRDTDERNVAFNARPYFRALAGLLNEM
HAPDNALDSSHPQVLAAFASAFLALQPLRVPGFAFAWLELVSHRCFMPRLLIDHEQKGWP
LLQRLLTAILRFMEPHLRTADLSEPIKLLYKGMLRMFLVLLHDFPEFLCNHHVNFCDIIP
PNCIQLRNLVLSAYPRNMRLPDPFTPNLKVDLLPETQQAPRINADADHAFRSSPMREEVD
AFLTTRKSENLSQQLIHRLMLSPSAALAAGTKYNVPLINAFVLYVGVQAIQANRSKDASS
GIAQSAPMELFSQLIESLDMEGRYLFVNAIANQLRYPNCHTHYFSCVILFLFSEAKFAII
QEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWGHAFTKCSPEIERLFESVARSC
LPQQDKEGVPKPSPVPAS
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatgggtcgtccaagggagacgtggacgcgcagaggttagcgtcggtggcgtcc
acggcggaggcgatggaggagctcgggtacgcgtgcgcgcacgcgaaagattcattgatt
gaaattctagggaaattgccaaagttggacgacgcggggttggcgaaagtggtcgggatg
atcgcgaggacgagctctgggaagttagaaacgtcgaggggggaggctgcgttggtgtcg
ttggcgaaaagcgccgggatcgcggcgccgagcgcggaggcgttgcgattgacgacgtgg
aacggggacgtcgtggtggacgccgtcaacgcgacgtataaggatttaaattgggagaac
gcgatggaaaagctcgatcaacccgagtttggatgtccggacgcgagttcgtttcagttg
atctgcgacatgtactcacgagcgactgggaagagcttcccggcgaaggctttgtgcgcg
gcgccgtggggaaagaatcaggcgggtcagattgaggcgctgcgacaactcttaggttcg
ccgcaggagtcgtgcgattgggggagtttgaagcatgtcgacgttgaagggacgttagcg
gggccttgggggtgtttggatttgatgtcgacgctttgctcgttgagcgaaaccggacac
cgagacgcggcgaggggggcgctcgagccgggcgccgggcggtctccggagacggtgtgc
atcactctcgcgcaagtttgcgacgaacacaacgcgctcgcgcgcgatgctttcggtgcg
ttattgcctccgtacgtggcgacgtcacaccctaagtcggggttggttttgagcaacgtg
tgggggcgtcactcggtggcggtgattcgcgccatggttgacgcgcacacgtcatcaccg
gccgcggccgatcgtatctttgacgtttgtcaagagttgaacgccttgcaagttatcatc
gatcgatcgccgtttcccttggcgattgagatggtttctatcgcctccgtccgcgcgggc
gtaaacttggagcagtggctgcaagagaagatcaaagccaacggtggcgcgtttgtgagc
gcgtgcatgcggttcttgcgcgcgaaggcgacgcaagagggtggagataagggtgccacg
ccgctcaagccagaggttttgcagactttcttgaaggttttacaaggcgcgcagcagacg
atgccgcccgatttgcaggcggagcttcgccaactcgtcgcgcagattcaaaactcgcca
aacaaaggtcgagattcgagcgcggcttcggacgatttgtccgtgcaagccggcaccgcg
caaggtttcacgccggacgtggaagaagaggccaaccgctacttccagcgcgtgtattct
atgcagcagtccatcggggagttggtcgaggtgctgcgcgctttcagagtgagccaagtg
caacgcgaacgcgatgtgttctcgtgcatggtgcacaacttgtttgatgaatacaagttc
ttcccgaagtatccagaaaaggagttgagaatcacagctgtgctcttcggtcagctcatc
ttccacaatctcgtgagtaacatcactctcggcgttgctttgcgttgcgtcttggacgcg
cttcgcaagccgcaaggatcaaagatgtttgccttcgggtcggatgctctcgagcaattc
aagcgtcgactcactgagtggccacaatactgccagcacttggcgcagattccgaatctc
gcgcaggcacaccctgatttgttgcacctattctctaaaggtaacgatcaaaccgtggcg
ctcggtcgaagcgaaccgagcatgaacaccgcggcgaatgccgacgcacaacttgccgct
ggagtcgcgggaatgcgtatcggtggtggcgacagtggaggtgaaggaaaccacccacct
ttacctcgatcactgtcttccgggatgaacttaccgcctcaaccaccgggacctcctcca
gcgggagagtcggcgcccgcgccggcggccagtcgtctgacgacacgcggtatgagtacg
ccagagattggtcagatcgctcgcgtgtcgagcggtggacaaatcgccgcggcggcatcc
ggtgcgcccagcggcttcgctacgtctttgaacatcgacaccttggtcgccgccagcgcc
gaagcaaagcagccagacgcggcgacagcggacaaggttcactttttggtgaacaatctg
tcggcggagaacatggaagaaaaggcggctgaagtcaagtccaaggtgagcgcagatctg
tacgaatggtttgccggttatctcgtggtgaagcgtgcgtcgattgaaccaaactaccac
gcgctttacctcgagcttctcgagaaggttggcgacaagaatttgtacgccgcgattttg
caggccacgtaccgaaacatcaaggttttgttgtcaagcggtaaggtcaagacgaacagc
ggcgagcgcagcttgttgaagaatctcggctcgtggctcggtcaactcaccatctcgaag
cgtaagcccgtgcttcagcgtgacttggacctcaaggagctgattttggaaagctacgaa
tccggtcgcatgatcggcgtcgtgcccttcgtcgccaaggtgctcgaaccggctaaagac
aacatgatctttaaaccgccgaatccttggacggtggccattttgtcgttgttgtgcgaa
atctataacgaacgcgacttgaagctgaacctgaagtttgagatggaacggctgttcaag
catttggacgtcaacattaaggacatcgagccttcgatgttgctcgcgtctcgaatgcgc
gagcgccaaaacaaccccgactttgtcgcggacaagaattttgcagcgccggtaccgttg
caatcggccgcatcagaagggtcgcttcagcagcacggcgttgtcggtcgtagtatggat
gaggaagagaagactcgtttgcaaacgcaaagcctcgagggcgcgttgccaaacatgcaa
gctcacgtgcgcgtcgcggcggcgccaaacttgccagaatctactcgagccgcgctcttg
cgtctcctccctgtggctttgacgcaaggtattcgggagatcgtcgcgcccgttgtcgaa
cgttccgtgaccatcgcttgcaaaacatcgcaagagttagtccgcaaggatttcgccacc
gaggctgacatcaaccgcgtgcgcaaggcggcgcatctcatggtgtcttcgctcgccggc
tcgctcgccttggtgacttgccgagagcctctcaaggcgagtgttgcgaatcagcttcgt
gcgcttttgcagcagtcaggtgccggcgccggctcggaggcatccgccctcgaagccgcg
gtgcaatctgcgacggttgacaatctcgaattgggttgcgcgctcattgaaaaggcggcg
tccgagaaggcgattcgagacatcgatgaatctctcgccgcggctgtgattgtgcgtcaa
aagcatcgtgagtctggtatcaatcagccgttctttgatgcggccatcatgcaaggtcga
tacccggcggcgcttccggagtcgctcagaccgcgacctggacagctccccaccgccgct
cttcgcatctacgacgactttgcgcagcttcctcgcgcaccgtcgggaccgccgccgccc
tcgggcgcgccgccggctttcgcgagacagccacctttcggacaaccacagccaccgcca
ccgcctgtggcgtatccaggcatgccgccgccgccacctccaggtgcgccgccaccgctg
ccgccggatgttccgtctgagggcgtcgccgacggcgcgcaagacgccggcaaggattcg
gccaagggtcctccgtctggtgcgcatccgcacggtcaacccgatcccgcgggcttgcgc
gaaaaggttgcggcgcacttcgacgaatgggctcgagtgcaagatttgcccgtcaccgac
gcggcgaacgtggcgttcatgcagcgactcgtggagtcgcgtctgctcgcagaggacacc
caagaacgcttcttgcgcatcttggttgaactcgccgtcactcactgtctcggcagcgaa
gtgccgagcgcgacgcctcaagcgagctcgcagctttctttcgctgcgatcgacgcgtac
gttcgcctcgtcacgcgattggttcgtcgtcaagaagaaccgctggcgtcgaggttggca
tttttcggccgcgccttggtcgccgtcgtccgcacggcgatgcgcgacacggatgaacgt
aacgttgcgtttaacgcgcgaccttacttccgcgcgctcgctggtttgctcaacgagatg
cacgccccagataacgccttggactcctcgcatcctcaagttctcgcggcgtttgcctcc
gcttttttggcgttgcaaccgcttcgcgtgccgggctttgcatttgcctggcttgaactc
gtctcccatcgctgcttcatgcctcgtctcttgatcgaccacgaacaaaagggttggcct
ttgttgcaacgattgctgacggccatcctacgcttcatggaaccgcacttgcggacggca
gatctctctgaaccgatcaagttgctgtacaagggcatgcttcgcatgtttctcgtcttg
ctgcacgacttcccggagtttttgtgcaaccatcatgtcaacttctgcgacatcatcccg
cccaactgcatccagttgcgcaacttggtgttgtcggcatatccgcgcaatatgcgacta
cccgatccgttcactccaaacttgaaggtggacttacttccggagacgcagcaagcgccg
agaatcaacgccgacgccgaccacgccttccgctcctcgcccatgcgcgaagaagtggat
gcgttcttaacgacacgaaagtctgagaacctgagccagcaactgattcatcgcttgatg
ttgtctccttcagccgcgctcgcggcgggaacaaagtacaacgtcccgttgatcaacgcc
tttgtgctctacgtcggcgtccaagcgattcaagcaaaccgcagtaaggacgcctcgagc
ggcatcgcgcaaagcgctccgatggagttgttctcgcaacttatcgaatcgctcgatatg
gagggccgatacctgttcgtgaacgctatcgcgaatcagcttcggtatccgaactgccac
acgcactacttctcgtgcgtgattctctttttgttttccgaagccaagttcgcgatcatt
caagagcaaatcacgcgcgttctcctcgaacgcttgatcgtcaatcggccacatccgtgg
ggtttgttgatcacgttcatcgagctcatcaaaaatccgcggtacaacttctggggacac
gctttcaccaagtgctcgccggagatcgagcgactcttcgagtctgtcgctcgctcgtgc
ttaccgcaacaagacaaggagggcgtcccgaaaccttcgccggtgcccgcgtcatga
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integrated database retrieval system