Oenanthe melanoleuca (Eastern black-eared wheatear): 130252553
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Entry
130252553 CDS
T09236
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
130252553 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oma03021
]
130252553 (POLR1A)
Enzymes [BR:
oma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
130252553 (POLR1A)
Transcription machinery [BR:
oma03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
130252553 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
HMG_box
Motif
Other DBs
NCBI-GeneID:
130252553
NCBI-ProteinID:
XP_056346178
LinkDB
All DBs
Position
4:complement(64068606..64097754)
Genome browser
AA seq
1708 aa
AA seq
DB search
MRPPKVVPWRRLVGVTFGMYTAEEIRKLSVKPITNPQYLDNLGNPAVNGLYDLALGPPDS
KEVCATCMQNFSNCPGHFGHIELPLPVYNPLFFDKLYLLIRGSCLNCHMLTCPRAVVHLL
LSQLKVLEKGLLHAVHDLEIILNRFVEQCADVTGSEIEEELNRHVQEILQSSQIQDRCSN
VKNVCECRNSLVSQFWKSHMGSKKCPNCKSRRSLVRKEHNSKLTVTYPSSVYHKSGGEGI
LDETAGIDESQLGKRGYLTPMTAKEYILALWKNEGFFLRYLFPGMNPHESSGFSPDMFFL
DLLVVPPSRYRPVNRVGDRLFTNGQTVNLQAVMKDAQLIRKLLVFMAKEQCQPIKITEEI
QTETGGDSEPLDRSVLTTIPGQSIADKLYNAWIRLQSHVNIVFDSDMDKLITEKYPGIRQ
LLEKKEGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKE
LRQAVINGPKVHPGASMVINEDGSRTVLSATSLTQREAIAKQLLTPSSGAPQTGLKIVCR
HIRNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYTLAITDKQYLVPKDGKPLPGLIQDHMISGVSMTIRGCFFTREQYMELVYRG
LTDKKGKIKVFPPAIVKPQRLWTGKQVVSTLLINIIPDNYAPLNLTGKAKIGGRAWVKGP
AKGFLNLDSMCESQVIIRDGELLCGVLDKAHFGSSAYGLVHCCYEIYGGETSGKVLSCLG
RLFTAYLQLYRGFTMGIEDILVKREADHKRKKIIERSRQSGIEAVRAALNLPETASCEEV
QGKWQDAHLCKDQRDFNMVDMKFKEEVNNYNNEVNKVCMPLGLHRSFPENNLQLMVQSGA
KGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIRPS
EFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGED
GLDIPKTQFLQPEQFPFIAENYEVIQKADHLDEALARMESHQANQQFKAIKKWRARHQHS
VQREGGFLLFSQKKLASLKAQLPGGEIKNGRDPATLQLLKMWYELDEKKQRKYLKKTNKC
PDPSLGVWRPDTYFASVSETFENGVEGYINKWASENSQSYMCPALSSDRLKDLLYLKWQR
SLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTP
MMSVPVFNTKKALKKVKQLKKQLTRVCLAEVLQKVDIEESLHVKHKLNKHRLYKIKFHFL
PHEYYQEEKCVKPRQILHFMETRFFKVLLEAIKRKTAKMASFNEVSTRRTTRKDLDDDQV
KTPNGLEAVAEEEENIVDAEADEGDGDATERKRRKNQEEEVDYESEEENGEENANENLED
EEAESEKEEGTPGAEEDQNRAEGEDSQHLPFVSQTKKGKDRLLQSAEVRVSAVVESHPSI
QDYVFDTKNELWCEVSLALPLTKVYFDLSSLLASLARSTVIHEVKGITRCLLNESTNREG
QQEFVLQTEGINLAELFKYSDILDLNRLYCNDIHAMAKNYGIESALRVIIKEIKDVFAVY
GIVVDPRHLSLVADYMCFEGIYKPLNRIGIQSNSSPLQQMTFETSYKFLKEATMMGAHDE
LRSPSACLVVGKVVKGGTGLFDLKQPLT
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctcccaaagtggtgccgtggcggcggctggttggggtgaccttcgggatgtac
acggccgaggagatcaggaaattgagtgtaaaacccataacaaaccctcagtacctggat
aatctggggaatccggctgtaaatggtctgtacgacttggccttgggacccccggactcc
aaagaagtgtgtgcgacttgcatgcagaacttcagcaactgccccgggcactttggccac
atagagctgcctctgcctgtctacaacccgctgttcttcgataaattataccttctcatc
agaggttcttgtttgaactgccacatgctgacatgtcctcgagccgtggttcacttactg
ctgagtcagctgaaggtgctggagaaggggttacttcatgctgtccatgaccttgaaatc
attctgaacaggtttgtagagcaatgtgcagatgtgacaggctcagaaattgaagaggag
ttaaatcgccatgttcaggaaatattgcaaagctctcaaatccaagatcggtgttccaat
gtcaaaaatgtgtgtgagtgtagaaatagtctggtatcacagttctggaaatcacacatg
ggttcaaagaaatgcccaaactgcaaatccaggagatcactggtgcgaaaggagcacaac
agcaagctgacagtaacctatccttcttcagtgtaccataagtcaggaggggaaggcatt
ctggatgagacagcaggtattgatgaaagccagttagggaagagaggatacctgacacca
atgactgccaaggaatacatcctggctttgtggaagaatgaaggtttctttctgcgttat
ctcttccccgggatgaatccccatgagagttcaggattcagtccagacatgtttttttta
gatctacttgtggttccaccttctaggtaccgtcctgtgaaccgcgttggcgatcgcctg
ttcacgaacgggcagaccgtgaacttgcaggctgtgatgaaagatgcccaactgatccgg
aagctcttggttttcatggccaaagaacagtgccagccaataaaaatcacagaagaaatt
caaacagagacaggaggggatagtgaacctctggaccgttctgtgctgacaacaattcca
ggacagagcattgcagataagctgtacaatgcttggatacgtctgcagagccatgtcaac
attgtgtttgacagtgacatggacaaactgataacagaaaaataccctggcattcgtcag
ctgctggagaagaaggaggggctgttccgcaagcacatgatggggaagcgtgtggatttc
gctgctcggtccgtcatctgccccgacatgtacattgggaccaacgagattggcatccct
atggtatttgccaccaaactgacttacccccagccagtcactccctggaatgtcaaagag
ctgaggcaggctgtcatcaatggccccaaggtgcaccctggtgcctccatggtcatcaac
gaggacgggtcccgcacggtgctgagcgccaccagcctgacccagcgcgaggccatcgcc
aagcagctgctcaccccctcctcaggggcaccccagacaggcctgaagattgtgtgtcgg
cacatcaggaacggggacgtgctgctgctgaaccggcagcccacgctgcacagaccttcc
atccaggcgcaccgggcgcggatcctgcccggggagaaggtgctgaggctgcactacgcc
aactgcaaggcctacaacgccgacttcgacggcgacgagatgaacgcgcacttcccgcag
agcgagctgggcagggcggaggcctacaccctggccatcactgacaagcagtacctggtg
ccaaaggatgggaagccacttcctggcttgatccaggaccacatgatttctggagtcagc
atgacaatccgaggctgctttttcaccagagagcagtacatggagcttgtgtaccgaggg
ctgacagacaaaaaaggaaaaattaaagtctttcctccagccattgtgaagccacagcga
ttatggacaggaaagcaggttgtttccacgttgttgataaacatcattccagacaactat
gctccactgaatttgactgggaaagcaaaaattggtgggagagcgtgggtaaagggacct
gcaaaaggatttctgaatcttgattcaatgtgtgaatctcaggttataatcagagatggg
gaattactgtgtggagtcttggacaaagctcactttggcagctctgcctatgggctggtc
cactgctgctatgagatctatgggggtgaaaccagtgggaaagtgctgtcgtgtctgggg
cgtctcttcactgcttacctgcagctctacaggggatttaccatggggattgaagatatt
ttggttaaacgtgaagcagatcacaaaagaaaaaaaatcattgaaaggtcaaggcagagt
ggtattgaagctgttagagctgctcttaatttgccagagacagcatcatgtgaggaggtc
caagggaagtggcaggatgcccatctctgcaaagaccagagggattttaacatggttgat
atgaaattcaaggaggaagtaaacaattacaacaatgaagtcaacaaggtttgcatgccc
cttggtctccacaggagctttccagagaacaatttgcagttgatggtacagtcaggagcc
aaaggatccactgtaaacacaatgcagatttcttgtttgctgggccagattgagctggaa
ggtcgaagacccccactgatggcatctggcaaatctctgccatgtttccagccttatgat
ttttcccctagctcaggaggatttgtgactggcagatttctcactgggatcagaccttct
gaattcttctttcactgcatggctggcagggaaggtcttgtggatacagctgtcaaaacc
agccgttctgggtacctgcagaggtgtatcatcaaacatttggaaggactggtagttcag
tatgacctgactgtacgagacagtgatggcagtgtggtgcagtttctgtatggagaagat
gggcttgatatccctaaaactcagttcttacaacctgaacagtttcctttcattgcagaa
aactatgaggtaatccagaaggcagaccatctggatgaagctttggcaaggatggagtct
caccaagctaaccagcagttcaaagccatcaagaagtggcgagccagacaccaacactct
gtgcaaagagaaggaggctttctgttgttttcccaaaagaaattggcaagtttgaaagca
cagcttccaggaggtgaaataaagaatggaagagatcctgctactttacagttgttgaag
atgtggtatgagcttgatgagaagaaacaaagaaagtacctgaagaagacaaataagtgt
cctgacccaagccttggggtctggcgtccagatacttattttgcatctgtttcagaaaca
tttgaaaatggagtggaaggctatatcaataaatgggcatctgagaacagccagagttac
atgtgcccagcactttcttctgatagattaaaggatctgttgtatttaaagtggcaacgt
tctctttgtgacccaggagaagctgtggggcttcttgctgctcagagtattggggagcct
tcaacacagatgactctgaacacctttcactttgctggcagaggtgaaatgaatgtcaca
ttgggtattccaaggctgcgagaaatactgatggtggccagtgcaaacattaaaacacca
atgatgagtgttcctgtgttcaataccaagaaagctctcaagaaggtgaaacagcttaag
aaacagctcacaagagtgtgcttagctgaggtcttgcagaaagtggacattgaggaatcc
ctgcatgtgaagcacaagctgaacaagcatcgcctctacaaaatcaaattccatttcttg
ccccatgaatattaccaagaggagaagtgtgtgaagcccaggcagatcttgcatttcatg
gaaacaagattctttaaagttcttctggaagcaattaaaaggaagactgcaaagatggca
tctttcaatgaagtcagcactcggaggacaactcggaaggatttagatgatgaccaagtc
aagacaccgaatggtctggaagctgtggcagaggaggaagagaacattgttgatgcagaa
gctgatgaaggggatggtgatgctacagaaagaaaacgaaggaaaaaccaggaagaagag
gttgattatgagagcgaagaagagaacggggaagaaaatgctaatgagaatctggaagat
gaagaggctgaatctgaaaaagaagaggggactcctggtgctgaagaggatcagaacaga
gcagagggtgaagattctcagcatcttccctttgtgtctcagactaaaaaagggaaagat
cgattgctgcagtcagcagaggtgcgagtcagcgctgttgtggagagccacccatccata
caggattacgtgtttgacaccaaaaatgagctctggtgtgaggtttccttggcattgcca
ctgaccaaggtgtactttgacctctcctccctgctggcatccctggcacgcagcacggtg
atccacgaggtgaagggcatcactcgctgcctgctgaatgaaagtaccaacagggaggga
cagcaggaatttgtgctccagacagaagggataaacctggcagagctcttcaaatactct
gatattttggatctgaacagactttattgcaatgatatccatgccatggctaagaattat
ggaattgaatcagccctgagggtgattataaaggaaataaaagatgtatttgctgtatat
ggaattgtggtagaccctcgacacctttcacttgtggcagattacatgtgttttgaagga
atttataaacccctcaaccgaattggaattcagtccaactcctcccctctgcaacagatg
acgtttgaaaccagctacaaattcttgaaggaagcaacaatgatgggtgcccacgatgag
ctgcgctccccctcggcctgcctggtggttggaaaagttgtcaaaggagggactggcttg
tttgatctcaagcagcccctgacatag
DBGET
integrated database retrieval system
