Oenanthe melanoleuca (Eastern black-eared wheatear): 130255304
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Entry
130255304 CDS
T09236
Symbol
COL6A2
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(VI) chain
KO
K06238
collagen type VI alpha
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04510
Focal adhesion
oma04512
ECM-receptor interaction
oma04518
Integrin signaling
oma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130255304 (COL6A2)
04518 Integrin signaling
130255304 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130255304 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130255304 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oma04147
]
130255304 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
oma00536
]
130255304 (COL6A2)
Exosome [BR:
oma04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130255304 (COL6A2)
Glycosaminoglycan binding proteins [BR:
oma00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130255304 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
130255304 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
DUF7939
Motif
Other DBs
NCBI-GeneID:
130255304
NCBI-ProteinID:
XP_056351766
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All DBs
Position
7:complement(435488..460754)
Genome browser
AA seq
1020 aa
AA seq
DB search
MFPQALFPTLLCVALVPLHAAQLDVDVGDANPTSCAEKRNCPINVYFIIDTSESVALQTV
PIQSLVDQIKRFIPMFIDKLESELYQNQVYITWQFGGLHYSDVVEIYSPLTSSKDIYLPR
LSAIKYLGRGTFTDCAISNMTQQIQTQMANGVNFAVVITDGHVTGSPCGGMKMQAERARD
MGIKLFAVAPSEKVYEQGLREIANLPHELYRNNYAITQRDTLEIDVNTIDRIIQAMKHEA
YGECYKMSCLEIAGPPGPKGYRGQKGAKGNMGEPGSPGLKGRQGDPGIEGPIGYPGPKGV
PGLKGEKGEIGSDGRRGAPGLAGRNGTDGQKGRLGRIGPPGCKGDPGDKGPDGYPGDAGD
QGERGDAGIKGDPGRPGRSGPLGPPGEKGSPGLPGNPGAQGPAGTKGRKGEVGPPGPKGE
AGRRGDPGTKGSKGSPGGLGERGDPGPEGTRGLPGEVGNKGARGEQGLPGPRGPSGAVGE
PGRIGSRGDPGDLGPRGDAGPPGPKGDRGRPGFSYPGPRGPQGDKGEKGQPGPKGGRGEL
GPKGVQGTKGEKGEPGDPGPGGEPGQRGPPGEAGPEGTPGPPGDPGLTDCDVMTYVRETC
GCCDCEKRCGALDIMFVIDSSESIGYTNFTLEKNFVVNVVSRLGSIAKDPKSQTGARVGV
VQYSHEGTFEAIKLDDERIDSLSSFKEAVKRLEWIAGGTWTPSALQFAYNKLIKESRREK
AQVFAVVITDGRYDPRDDDKNLGALCGRDVVVNTIGIGDMFDQPEQSETLVSIACNEPQR
VQKMRLFSDLVAEEFIDKMEDVLCPDPQVVCPELPCQTELAVAQCTQRPVDVVFLLDGSE
RIGEQNFQSAHRFVEDVARQLTLARSNSDPMNARIALLQYGSEQDQNVVFPLTHNLTEIS
DALAQIKYLDSSSNIGSAIIHAINNIVLSPGNGQRLARRNAELSFVFITDGITGSKNLEE
AINSMKKQDVMPTVVALGSDVDMDVLLKLGLGDRATIFREKDYDSLSQPSFFDRFIRWIC
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgttcccacaagccttgtttcccactctcctttgtgtggctctagttcctctccatgcc
gctcagcttgatgttgatgttggagatgccaatcctacctcctgtgcagaaaagaggaac
tgccccatcaatgtctacttcatcattgacacctcggagagcgtggctctgcagaccgtg
cccatccagagcctcgtggaccaaataaagcggttcatccccatgttcatcgataaactg
gagagtgagctctaccagaaccaagtctacatcacctggcagtttggtgggctccattac
tcagatgtggtagaaatttacagccctttgacaagcagcaaagacatttacctgcccagg
ctgtctgccatcaaatacctgggccggggcaccttcacagactgcgcaatctccaacatg
acccagcagatccagactcagatggccaatggcgtgaacttcgcagtggtcatcaccgac
ggccacgtgacaggcagcccctgcggggggatgaagatgcaggctgagagggcacgagac
atgggcatcaagctgtttgcagtggcccccagcgagaaggtgtacgagcagggcctgcgg
gagattgccaacctgccgcacgagctgtaccgcaacaactacgccatcacccagagggac
accctggagatcgatgttaacaccatcgacaggatcatccaggccatgaaacacgaagcc
tatggagagtgctacaagatgagctgcctggagattgccggtccacctggtcccaaggga
taccgagggcagaagggtgcaaaggggaacatgggtgagccaggttcccccggtctgaag
ggacgacagggcgacccaggtattgaaggtccgatcggataccctggtcccaagggcgtc
ccagggctgaaaggagagaagggagaaataggatctgacggacggaggggtgcccctggc
ttggcaggaaggaacggcacagatggacagaagggcaggctgggaagaattggaccacca
ggatgcaagggtgaccctggtgacaagggccctgatggttacccaggagatgcaggagac
caaggagaaagaggagatgcaggcataaagggggatcctggccgtcctggtcgcagtgga
cccctggggcccccaggagaaaaaggaagcccgggacttccaggcaaccctggagctcaa
ggacctgctggaaccaagggaaggaaaggtgaagtgggacctcctggacccaaaggagag
gctggacgacgtggagatccagggacgaaaggcagcaaaggctctcctggaggcctggga
gaaaggggagatcctggtccagagggtactcgtggtctgcccggtgaggttggaaacaaa
ggagccaggggcgaacaaggactgccaggaccccgaggcccttcaggtgctgtgggagag
ccaggcaggataggatcacgtggggaccctggtgacttgggtccaagaggtgatgctgga
ccaccaggaccaaagggtgacagaggcaggcctggctttagctaccctggacccagagga
cctcagggtgacaagggtgagaaggggcagccaggacccaagggaggacgaggtgagctt
ggaccaaaaggagtacaagggaccaaaggagagaagggggagccgggtgatcctggccca
ggaggagagcctggacagcgtggtccacctggtgaagcaggccctgaggggacccctggc
ccaccaggagatcccggtctgactgactgcgatgtgatgacctatgtgcgagagacatgc
ggatgctgtgactgtgagaagcgctgcggtgccctggacatcatgtttgtcatagacagc
tccgagagtattggctacaccaacttcactctggagaagaattttgtcgtcaatgtggtc
agcaggctgggctctattgccaaggaccccaaatcacagacaggtgcccgtgttggggtg
gtgcagtacagtcacgaggggacttttgaagccatcaagcttgatgatgagcgcattgat
tccctgtcaagtttcaaggaagcagtgaagcgcctggagtggatagctggaggcacctgg
acaccatctgccctccagtttgcctacaacaagctcatcaaggaaagcaggagagagaaa
gcccaagtgttcgctgtggtgatcacagacgggcgctacgacccccgggatgatgacaag
aacctcggggctctttgtggtagagatgtggtggtcaacaccatcggcataggagacatg
ttcgaccagccggagcagagcgagaccctggtctccatcgcctgcaacgagccccagaga
gtccagaagatgaggcttttctcagacctggtggcggaggagttcattgacaaaatggag
gatgtgctgtgcccagatccacaggttgtctgtcctgagctgccctgtcagacagagctt
gccgtagcccagtgcacccagcgccccgtcgacgttgtcttcttgctggatggctcagaa
aggatcggggagcagaacttccagagcgcccaccgcttcgtggaggacgtggcccggcag
ctgacgctggcccggagcaacagtgaccccatgaacgcccgaatcgcgctgctgcagtat
ggcagcgagcaggaccagaacgtggtcttcccgctgacccacaacctcactgagatctct
gatgccctggcacagatcaagtacctggactcatcctccaacatcgggtcagccatcatc
catgccatcaacaacatcgtgctcagcccaggcaatgggcagcggcttgcccggcgcaat
gctgagctctccttcgtcttcatcaccgacggcatcacgggaagcaagaacctggaggag
gccatcaactccatgaagaagcaagatgtcatgcccacggtggtggctctagggagtgat
gtggacatggatgtcctgctgaagcttggcctgggggaccgggcaaccatcttccgggag
aaggactatgacagcctctcccagcccagcttctttgacaggttcattcggtggatttgt
taa
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