KEGG   Oenanthe melanoleuca (Eastern black-eared wheatear): 130258081
Entry
130258081         CDS       T09236                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog isoform X1
  KO
K14004  protein transport protein SEC13
Organism
oma  Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03013  Nucleocytoplasmic transport
oma04141  Protein processing in endoplasmic reticulum
oma04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:oma00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    130258081 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    130258081 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    130258081 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oma03019]
    130258081 (SEC13)
   04131 Membrane trafficking [BR:oma04131]
    130258081 (SEC13)
Messenger RNA biogenesis [BR:oma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     130258081 (SEC13)
Membrane trafficking [BR:oma04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    130258081 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    130258081 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    130258081 (SEC13)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EIPR1 WD40_Gbeta EIF3I WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_WDR41 Beta-prop_WDR35_TULP_N WD40_RFWD3 NBCH_WD40 MIOS_WD40
Other DBs
NCBI-GeneID: 130258081
NCBI-ProteinID: XP_056357080
LinkDB
Position
12:294009..300342
AA seq 320 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLSYTGDGQWEVKKISNAHTIGCNAVSWAPAVVPGSLIEQPSGQKPNYIK
RFASGGCDNLVKIWKEEEGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVF
IWTCDDASGNSWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGLWACIS
DVNKGQGGVSAVTEGQQNEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtgtcggtcattaacaccgtggacacgtcccacgaggacatgatccacgatgcacag
atggattactacggcacccgcctggccacctgctcctcagaccgctccgtgaagatcttc
gacgtgcgcaacggggggcagatcctcatcgcagacctcagggggcacgaaggtcctgtg
tggcaggttgcctgggcacatcctatgtatggaaatatcttggcttcctgttcctatgac
aggaaggttattatctggaaggaagaaaatggcacttgggaaaagacctatgagtacacg
ggacatgattcttcagtgaattctgtctgctgggcaccacacgactatgggctgatcctg
gcctgtgggagctctgacggggccatttccttgctgagctacacgggggatgggcagtgg
gaagtgaagaagatcagcaatgcacacacgattggatgtaatgcagttagctgggctcct
gctgttgtgccagggagcctcatagagcaaccctctggtcagaagccaaactacatcaaa
agatttgcatctggtggctgtgacaacctggtcaagatctggaaggaagaagagggtcag
tggaaagaagagcagaagctggaggctcacagtgactgggtacgagacgtggcctgggct
ccatccataggtttgccaaccagcaccattgctagctgctcacaggatggcagagtgttt
atctggacgtgtgacgatgcctctggaaactcctggtcgccaaagctgctgcacaagttc
aatgatgttgtctggcacgtgagctggtccatcactgccaatatccttgcagtgtctgga
ggagacaacaaagtgacactgtggaaggagtcggtggacggactgtgggcgtgtatcagc
gacgtgaacaagggccagggaggggtgtctgctgtgacagaagggcagcagaacgagcag
tga

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