Onychostoma macrolepis: 131520339
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Entry
131520339 CDS
T09350
Symbol
dscamb
Name
(RefSeq) cell adhesion molecule DSCAM isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omc04515
]
131520339 (dscamb)
Cell adhesion molecules [BR:
omc04515
]
Immunoglobulin superfamily
DSCAM family
131520339 (dscamb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
Ig_5
C2-set_2
Pur_ac_phosph_N
C1-set
V-set_CD47
Interfer-bind
fn3_2
DUF6377
DUF6249
DUF4446
Motif
Other DBs
NCBI-GeneID:
131520339
NCBI-ProteinID:
XP_058600483
LinkDB
All DBs
Position
15:complement(5968422..6149733)
Genome browser
AA seq
2020 aa
AA seq
DB search
MWILAFLFLQSILNVFGEDLRSSLYFVNASLQEVVFSSTTGALVPCPAAAVPPATLRWYL
ATGEEIYDVPGIRHVHPNGTLQIYGFLPSSFSNLINDNTYYCTAENPSGKIRSQDLHIKA
VFREPYTVRVADQRVMRGNTAVFKCIIPASVEEYVSVVSWEKDTVSLVSGPRYLITSMGA
LYIQDVQSEDAVNIYRCTTRHRYTGETRQSNSARLLLSEPVDSAPVILDGFERREVMVGH
RVELPCKASGHPTPRYRWLRDNSPLESDSRYHQSVSGLLIEATRPSDAGSYVCEVWNSFG
NAKVVGRLVVKQPLKAVVSPRKVRGSVGSQVSLFCSVTGSDEYEITWYRNGEKIYQGINV
RITGINNENLVMEGMAKSDGGAYQCFARNGKMSTQDLVQVVLEDGTPKILSAFSEKVVSP
NEPISLVCHVKGTPLPTVTWTLDDDPVIKDSNHRMDRIITTEGHVLSYLNVSHTQVTDGG
VYRCTCNNSAGSVSYQARINVRGPASIRPMKNVTAIAGRDTYIHCRIIGYPYYSIKWYKD
SNLLPFNHRQRAFENNGTLKLSNVQNSDEGEYTCYVLVDPEKQIHRSVHVTVKVPPLIQH
SDSQSASIGQRVFIPCVVISGDLPMSITWHKDGRPINASLGVTIDNIDFTSSLRISNLSE
IHNGSYTCIARNEAAAVEHSIQLIVKVPPHFEVQPRDQDGIYGKSVILNCSAKGNPIPTI
VWNHSKGAGVPQFQPIALNSGSRIQLLEKGSLLIKHVLEEDAGFYLCKVSNDVGADISKS
MYLTVKIPAMITSYPNTTRAEQGHMTEMSCTAHGEKPIKVRWEKESHIINPDMSRYVVTV
KEVGDEVISTLQILHTVREDSGFFSCIAINSYGEDKGIIQLIVQDRPDPPEVEIREVKDR
TIALRWTMGFDGNSPITGYDINYKNKSSSWASSQMTKDVSPQLNQATIIELHPASTYNIR
MFAKNQIGESRPSNELTITTDEAPPDGAPQDVQLEAISSQSIKVTWKPPLKHLQNGLIRS
YQVCYREFGTGGSPQYNTINVDTTGDIETLTLDNLKKYTQYEVRVQAANRAGMGPTSEEI
TITTLEDVPSRPPENVVTTATTPETISLSWSALPKEALNGMLLGYRVIYWANLPDGELGE
IRNITTTKPSLELERLEKYTNYSIQVLAFTRAGDGVRSEQIYTRTKEDVPGPPAGVKAAA
STSSVVFVSWLPPLKLNGIIRKYTVFCSNPYPTVISEFEAAPDVYFRRLTNLNQNWQYSI
WVVAVTAAGRGNASEIITVEPQAKAPARILTFSGTVTTPWMRDIVLPCKAVGDPPPTIKW
LKGNNGTPAPVSIDGRRSAHSNGSFVIRTVKAEDSGYYRCVASNNWGSDEIMLNLQVQVP
PDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQFSEDNSEEWGSFSISPSERSYRLE
NLKCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQFAKDHELFSSINSTRVELNLIGW
NNGGCPIDSFTLEYRPVDTTKWTMVKRDSLTKNHILYDLQEATWYELQMRVGNSAGTAEK
RVRFATLNVDGSTIAPLPKTVDPSQETRQGNEGLKMMVTIICILVAISMVFIVLLVLRRR
RREQRLKRLRDAKSLAEMLMSKNARTPDTVNKQQQTLRMHIDIPRAQLLIEERDTMETID
DRSTVLLTDNDFGETSKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTNPTARRTAKAG
PATRSRYASQWTLNRPHPPVSSHTLTTDWRLPTPRATGSVDKESDSYSVSPSQDTDRARS
SMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQMTAGTNDYTDSLT
SSTPSESGICRFTASPPKPQDASRVMNMAVPKAHRPAGELVHLPPYLRMDFLLNRGAAPS
GREATGQTCMDPQKSRMAKRPALLAPTPSETPSSALSSSGPPSREAVQQWQPGTASTLPQ
REPGDLAQAAKLSSSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6063 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggcatttctctttctccagagcatcctgaatgttttcggtgaagatcta
cgttccagcttatattttgtcaatgcatctctgcaagaggtagtgttctccagcaccaca
ggggcactggtgccgtgtcctgccgcggccgtgccccccgccacgctgcgctggtacctc
gccaccggggaggagatctacgatgtcccaggcatccgccatgtgcaccccaatggcacg
ctgcagatctacggcttcctgccatccagctttagtaacctaatcaatgacaatacatac
tactgcacagcggaaaacccatcaggaaagatcaggagtcaagatctacacatcaaggcc
gtattccgggagccatacacagtgcgggtggctgatcagagagtcatgcgagggaatacg
gcggtcttcaagtgcattatcccggcctcagtagaggagtacgtcagtgttgtatcatgg
gagaaagacacagtctcacttgtctcaggaccaagatatcttattacatccatgggggcc
ttgtatattcaggatgtgcagtcagaggacgcggtgaatatttatcgctgtaccacgcgg
caccgatacacaggggagaccagacagagcaacagtgcccgactgcttttatcagaacct
gtggactctgctccagtgattctggatgggtttgaacggagggaggttatggtgggtcat
cgggtggagctcccatgtaaagcgtccggtcaccccacgcccaggtatcgctggctgagg
gacaacagccccttagaatcagacagccggtaccaccagagtgtatcgggccttctcatc
gaggccacacgacccagtgatgcaggcagttatgtgtgtgaggtgtggaacagcttcggg
aatgccaaagtggttggccggctggtggtgaaacagcctctgaaagcagtggtgagtcca
cggaaggtgagaggcagcgtgggtagccaagtgtcgctgttctgcagtgtgactggctct
gacgagtatgaaatcacctggtacaggaatggtgagaagatctatcagggtataaatgta
cgtataacgggcatcaacaacgagaacctggtgatggagggaatggccaagagtgatgga
ggagcgtatcagtgctttgctcgaaatggcaagatgtccacccaagacttagttcaggtc
gtcttggaagacgggacgccaaagatcctctctgccttcagcgagaaggtggtgagcccg
aatgagcccatatcactggtgtgtcacgtgaaaggaacccccctccccaccgtcacctgg
acgttagatgacgaccccgtcatcaaagacagcaaccaccgcatggatcgcatcattacc
acggaaggccacgtgctcagctacctgaatgtgtctcacacacaggtcactgatgggggc
gtctatcgctgcacctgcaacaactcggctggatcggtctcctaccaggctcgaataaac
gtaagaggtcctgccagtattcgaccaatgaaaaatgtcactgccatcgctggaagggac
acgtacattcactgtcgcatcattggttacccgtactactctattaagtggtataaggat
tccaacctgctcccgtttaaccatcgccaacgtgcctttgagaacaacggcacactgaag
ctgtccaatgtgcaaaactcggacgagggggagtacacatgctacgtgttggtggatcca
gagaaacaaattcacaggagcgtccatgtgacagtgaaagtgccccctctgatccaacac
tccgactctcagagcgcttccatcggtcagcgtgtcttcatcccctgcgtggtcatatcc
ggcgacctgccgatgtctataacctggcacaaagatggacgaccaatcaatgccagcctg
ggtgtcaccatagacaacatagactttaccagctcattgcgcatttcaaacctgtcggaa
attcataacggcagttacacctgtattgcccgtaatgaggctgctgccgtcgagcatagt
atacagctcatcgttaaagttccgccacattttgaggtacagccaagagaccaggatggc
atctatgggaaatcagtgatcctgaattgttcggcaaagggaaacccaatccccactata
gtatggaaccactcaaaaggtgctggcgtacctcagttccagcccatcgccttgaattct
ggctcacgtatccagctcctagagaagggttctctgctcataaaacacgtcctggaggaa
gatgctggattttatctgtgcaaggtcagcaatgacgtgggagccgatatcagcaagagc
atgtacctcaccgttaaaattcctgccatgatcacgtcttaccccaacaccacacgagca
gaacagggtcacatgactgagatgagctgcactgctcacggtgaaaagcccatcaaggtt
cgctgggagaaggaatctcatatcatcaacccagacatgagccgctatgtggttactgtg
aaggaagtgggagatgaggtcatatccaccctgcagatcttgcataccgtcagagaagac
tctggctttttctcttgcattgctattaactcttatggtgaagataaaggaatcattcaa
ttgatagtacaagatcgtcctgaccctcccgaggttgagatcagagaagtaaaggaccga
accatcgcacttcgctggacaatgggctttgatggcaacagccccattacaggatatgac
atcaactataaaaacaaatcatcttcatgggcctcatctcaaatgaccaaagacgtctcc
cctcagctgaatcaggccaccatcattgaactccaccctgcttccacctacaacatccgc
atgtttgccaaaaaccagatcggcgaaagcagaccaagcaatgagctgaccatcaccaca
gatgaagcaccacctgatggcgctcctcaagatgtgcagctggaagcaatctcatcccaa
agcatcaaagtcacatggaagccccccctcaaacacttgcagaatggtcttatccgaagc
taccaagtgtgttatcgggagtttgggacagggggcagcccacaatacaacaccatcaat
gtagacaccacaggggacattgaaaccctgaccctggataacctgaagaagtacacccag
tatgaggtgcgggtgcaagcagccaatcgggcaggcatgggtcccacctcggaggaaatc
accatcaccacgctagaggacgtgcccagtcgcccacctgagaacgttgtgacaacagca
acaacccctgagactatctccctgtcctggtctgctctgcccaaagaagcgctcaacggc
atgctgcttggatatcgtgtcatctactgggccaacctacctgatggagaactgggagag
atccggaacatcacaaccaccaagccttcactagagttggaacggctggagaagtacacc
aactacagtatccaggtcctggccttcactcgagctggagacggagtccgtagtgagcag
atctacacacgcaccaaagaggacgttcctggccctccagctggagttaaggcagctgct
tcaacaagctcggtggtgtttgtttcctggcttcctccactcaaactcaatggaatcatc
cggaaatacactgtcttctgttccaacccgtaccccacggtgatcagtgagtttgaggct
gcacctgatgtttatttccgtcgtttgaccaacctgaatcagaactggcagtacagcatt
tgggtcgtggcggtcactgcggcgggccgtgggaatgccagtgaaattatcaccgtagag
ccccaagctaaagcccctgcacgaatcctgacgttcagtggcactgtgaccaccccctgg
atgagggatattgtccttccatgcaaagcagtcggagaccctcctccaaccatcaagtgg
ctgaagggaaataatggtacaccagctccggtttcaatcgatggtcgtcgcagcgctcac
agcaatggcagctttgttattcgcactgtcaaagcagaggactctgggtactacagatgt
gttgccagtaacaactggggttcggatgagatcatgctaaaccttcaggtccaagtacct
ccggaccaaccgcgcctcacagtgaccaaaaccacaaccacctctatcacactgtcctgg
atccctggagacaatggaggaagctccatcagaggctacattttgcagttctctgaggat
aacagcgaagagtggggcagtttctccatcagccccagtgagcgctcttaccgtctggag
aacctgaagtgcggtacttggtacaaatttactctgactgcacaaaatgcagttggacct
ggacgcatcagtgaaatcattgaagctaaaacccatgggaaagagccacagttcgccaaa
gatcatgagcttttctcaagtatcaactctacccgtgtggagctcaacctcattggctgg
aacaacggtggctgtccaatcgactccttcacactggaatatcggccggtggacactacg
aaatggaccatggtgaagcgagattctctcaccaagaaccacattctctacgacctacag
gaggccacctggtacgagctccagatgagagtgggcaacagtgcaggaacagcagagaag
agggttcggttcgccactctaaacgtggatggcagcacgattgctccattgccaaagact
gtggaccccagccaggagaccaggcagggcaatgaaggacttaaaatgatggtaacaatc
atctgcattctggtggcaatttccatggtcttcattgttcttctggtattgaggaggaga
agaagagagcagaggctcaagagattacgagatgcaaagagcctggcagagatgctaatg
agtaaaaatgcacgaacaccagacactgtgaacaaacagcagcagactctgagaatgcac
atcgatatcccacgtgctcagctactcatcgaggagagagacactatggagacaatcgat
gaccgctccacagtgctgttgacggacaatgactttggagaaacatctaaacagaagtcc
tcaaccgtcacccatacagtgcattaccagtctctatctcaggccactggaccactagta
gatgtgtctgatgctagacctggtacaaaccccactgcccgccgcacagctaaagcaggt
cctgccacacgcagtcgatacgccagccagtggaccctgaaccgaccgcaccctcccgtc
tcctcacacaccctcactactgactggaggcttcccacaccccgtgccacgggctcagtg
gacaaagagagtgacagttacagtgtcagtccctctcaggacacagaccgtgctcgcagc
agtatggtgtctacagaaagcgcctcctccacgtacgaggagttagcccgtgcttacgaa
catgctaagatggaggaacagctgcgacacgctaagttcacgatcacagaatgtttcatc
tcagacacatcctccgagcagatgacggccggcaccaatgactacacagacagcctgacg
tccagcacaccgtcagagtcaggcatctgcagattcacagcttccccacccaaaccacaa
gacgccagccgggtcatgaacatggccgtgcccaaagcacacagacctgcaggtgaactg
gtccatcttcccccttacctacgcatggacttccttttgaaccggggagcagccccttca
ggtcgagaggccacaggacagacttgtatggacccgcagaagagccgaatggcgaagcgg
ccagccttgctggcccctacaccctccgagaccccctcgtcagccctctcttcctccggc
ccccccagcagagaggcagtacaacagtggcagccgggaactgcctccacactgccacag
cgcgagccgggcgacctggcccaggccgccaaactcagcagctcccaggaatcgctgtta
gactccagaggacacctgaaacaaagcaacaacccctacgcaaagtcctacacacttgta
taa
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