Onychostoma macrolepis: 131522288
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Entry
131522288 CDS
T09350
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
omc
Onychostoma macrolepis
Pathway
omc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131522288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omc04121
]
131522288
Enzymes [BR:
omc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131522288
Ubiquitin system [BR:
omc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131522288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4
SGL
zf-RING_4
DUF7741
Beta-prop_WDR3_1st
Motif
Other DBs
NCBI-GeneID:
131522288
NCBI-ProteinID:
XP_058603672
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All DBs
Position
16:complement(2300711..2302102)
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AA seq
394 aa
AA seq
DB search
MSETAVPSCMRAEDVLTEIQSNLLECKVCFEMFSLQKRDQTAHNLPCGHVLCLKCVCALS
HPAQKKLECPFCRKLWDVGSTSECRALADLQELLLCESRPKSSFDHQEWMESMGWGTLHL
HSAFGGWGTMVNPTGMAVDETSGQILVVHDAEKRVVVFDAQGTLLNVFGRPSEVCYPLDV
ALTKTGHVLVTDAGDQSLKVFTSKGHSSTTVQGFRLPWGVDVDNRGRVLVTDAQLGTLNQ
IVMDFSHGVVLANRVVLKELMHPRSVASCRASGNIAIVERLRSSFTLRIFNSDFVPLTQV
DGFGLHLKSALSLVISAVAFDRNGYVIVGDVQNGMVWSLGNPQKNPALTPLVSGLMRPAA
LAATALNMLVVLDSGDHAVKFYTVDAEDLYCDQK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagacagccgtcccatcatgtatgagagccgaagacgtcctgacagagatccag
tcaaacctgctggagtgcaaagtgtgttttgagatgttctccctgcagaagcgtgaccaa
acggcacataatcttccctgcggccacgtgctctgtctcaaatgcgtctgtgccttgtct
caccccgcccagaagaaactggagtgtcctttttgtaggaaactgtgggacgttggcagc
acctcggaatgccgtgcgcttgcagatctccaagagcttcttctgtgtgaatctcgtcct
aaatcatcctttgatcatcaagaatggatggaaagcatgggttgggggacattgcatctc
cattcggcctttggaggatggggaacgatggtcaaccctactggaatggctgtggacgaa
acatcaggacagatcctagtggtgcacgatgctgagaaacgagtcgttgtttttgatgca
caaggaactcttttaaacgtctttgggcggccatccgaagtctgttatccactagatgtt
gcgctgaccaaaaccggacacgttttggtcacagatgctggtgaccagtcactcaaagtc
ttcacgtccaaaggccattcttcgacgaccgttcaaggttttcgactgccgtggggtgta
gatgtggacaaccgtggacgagttttagtgaccgacgctcagttgggaaccctaaaccaa
atcgtaatggacttttctcatggcgtggttttagctaaccgagttgttttgaaagaactg
atgcatccgcgttcggttgcttcttgcagagcttcgggaaacatcgcaatcgtggagcga
cttcggagcagcttcacgctgaggatattcaatagtgacttcgttcctttgacgcaggtg
gacggtttcggtcttcatttgaagagtgctttgagtttggttatatctgcggtggctttt
gatagaaatggatacgtgattgttggggatgtgcagaatggcatggtttggagtttggga
aatccacagaaaaaccctgcgctgactccgcttgtgagcggcctgatgcgtccagctgcg
ttggctgcgacggcgttgaacatgcttgttgtcttggacagtggtgatcatgcggtcaag
ttctacactgtggatgctgaagacttgtattgtgatcaaaaatga
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