Onychostoma macrolepis: 131524251
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Entry
131524251 CDS
T09350
Symbol
ighmbp2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omc03009
]
131524251 (ighmbp2)
03012 Translation factors [BR:
omc03012
]
131524251 (ighmbp2)
Enzymes [BR:
omc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
131524251 (ighmbp2)
5.6.2.5 RNA 5'-3' helicase
131524251 (ighmbp2)
Ribosome biogenesis [BR:
omc03009
]
Eukaryotic type
Other ribosome biogenesis factors
131524251 (ighmbp2)
Translation factors [BR:
omc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
131524251 (ighmbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_19
AAA_30
zf-AN1
DEAD
Viral_helicase1
NAT10_TcmA_helicase
ResIII
UvrD-helicase
nSTAND3
AAA_16
Flavi_DEAD
PhoH
AAA_22
T2SSE
Herpes_ori_bp
nSTAND_NTPase5
AAA_25
NPHP3_N
ABC_tran
AAA_7
Zot
AAA_33
AAA
UvrD_C_2
AAA_31
AAA_5
AnfO_nitrog
ATPase
AAA_28
cobW
SRP54
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
131524251
NCBI-ProteinID:
XP_058607172
LinkDB
All DBs
Position
18:complement(12306939..12316848)
Genome browser
AA seq
1015 aa
AA seq
DB search
MTAIHFFIRRADLTAMEVENFVSKTLELLQEEREAELEETRAWQENLSPKNLQHKGVYLL
KLQIASQHTGMYGRLLVVFEPRKSIGPSVLPSNTFGPGDIIGLYQAEGQDQPSQLGSGVV
TRVTQASLTVAFDDMQDGMNLDRDGLYNLMKLANDVTYRRLSSALKSLNGYGSGPASHLI
SVLFGYSEPGILSHQHALEFSNTGLDNSQKEAVSFAISQKDVAIIHGPPGTGKTTTVVEV
ILQALKQEQKVLCCAPSNVAVDNLVERLAKSKVKVLRLGHPARLLKSIQKHSLDAVLAHS
DNTNIISDIRKDMDKAFNEMKKARDKGQRSNLRREIKELRRELRTREETAITQILKRADV
ILATNTGASDDGPLKHLPNDHFDLVVIDECAQALESSCWIALLKARKCLLAGDYKQLPPT
IKSQSAASKGLSVSLMERLIKKYGDSVVRMLTTQYRMNSAIMQWASEQMYEGKLIAHTSV
EKHLLRDLADVADVEETRIPLLLIDTSSCGLNEMEDTDEQSKGNQGEVDIVALHIKALTE
AGVQVKDIAIIAPYNLQVDLLRQKLSHKYAELEIKSVDGFQGREKEAVVLSLVRSNRKGE
VGFLAEDRRINVAVTRARRQLVVVCDSQTVRNHDFLKSLVDYMSEHGEVRTAFEYLEDCV
AQNYIRDEKDKQINSKDAASTKHKPKNQGKKTEQEQTKSANNKSRGVNQSNVHLDQRKNT
NSHHPKPKDVDQTQNKKKEIKDQLLNFLKDPNKTELQFPSTLNSHERMLVHELSEEMGLR
HESQGEGKTRHITVFRPPSEPEKSVEPEQPDVTACTAARLQDELQKGPSKPAVDLKSLHL
ERMRREQEKREEKKQEKQQCVRREPDLNASKSQSVKKPKGTSKGNTKIKAGATDIAAGAM
PDDDFDALINAVVKADSVCGFVKCKASVLTLGQLCLYCNRQYCLSHHIPEVHGCGDKAKA
QARMRISKEGVLYAGSGQKDKSMDPNKKAYLQRKLDSKLKDLASQRKTKAKDKEN
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgacagccatacacttttttatccgtcgagctgatttgacagctatggaggttgaaaac
ttcgtttccaagactcttgaactcctgcaagaagagagagaagctgaattagaagaaaca
cgagcatggcaggagaatttatctcccaagaatctacagcacaaaggagtgtacctgctg
aaacttcagatcgcaagccagcatactggcatgtatggcagactcctggtagtttttgaa
cccaggaaaagtataggtccctcagttctgcccagcaacacctttggacctggtgatatt
ataggtttgtatcaggcagagggtcaggatcagccgtctcagttgggttccggtgtggtg
acacgtgttactcaagcatcactgacggtggcttttgatgacatgcaagatggtatgaac
ttggacagagatggactttacaatctaatgaagctggcaaatgatgtgacctacaggaga
ctctcaagtgccttgaagtctttaaatggatatggcagtggtcctgcatctcacctgatc
agtgtcctctttggttactcagaaccggggatattatcacatcaacatgcactggaattt
agcaacactgggttagataattctcagaaagaggctgtgtcctttgcaatatctcagaaa
gatgttgcaatcatacatggaccaccaggaactggcaaaaccactacagttgttgaagtc
atcctgcaggcattaaaacaggaacaaaaggtcctttgctgtgctccttccaatgtggct
gttgataacttggtggagcgcctggcaaagagcaaggtcaaggttttaagattgggtcac
ccagcccgtctgctcaagtcgattcagaagcactcgctggatgcggtccttgcacacagt
gacaacaccaacatcatttctgatattcgcaaggacatggacaaagcttttaatgaaatg
aagaaggctcgagacaaaggccaacggagcaatctgagacgggaaatcaaggaactgcgg
cgagagctaaggaccagggaggaaacggctatcactcagatcctgaaaagagccgatgtt
attctagcaactaacactggagcctctgatgatggtcctctcaaacatcttcctaatgat
cattttgacctggtggtgatagatgagtgtgctcaggctctagagagcagctgttggatc
gctctgctcaaagcacgcaagtgcttactagctggggattacaaacagctgccaccaacg
atcaaatcacagagtgctgcatctaaaggcctgtcggtcagcttaatggagaggctgata
aagaaatacggagactcagtggttcgaatgttgaccactcagtaccgtatgaatagtgcc
atcatgcagtgggcttcagagcagatgtatgagggcaaactaatcgctcacacttcagtg
gagaaacacttgcttagagacctggctgatgttgctgatgttgaggaaaccagaattcct
cttctgctcattgacacctcaagctgtggcctgaatgaaatggaggacacagatgaacag
tccaaaggaaatcaaggagaggtagatattgtggctcttcatataaaggctcttactgag
gctggagttcaagtcaaagacattgcgattattgcaccctataatctccaggtggatctt
ttgagacagaaactgtctcataaatatgcagagctggagatcaagtctgttgatggcttc
cagggcagagagaaggaggcagtggtgttgtcattagtcaggtccaacaggaagggtgag
gttggatttcttgctgaagacagaaggatcaatgtggctgtgactcgtgccagacgccag
cttgtggtagtgtgtgattctcagactgttcgaaaccatgacttcctcaaatccctagtg
gactatatgtctgaacatggagaggttcgtactgcctttgagtacctggaagactgtgtg
gcgcagaattacatccgtgacgaaaaggacaaacagatcaacagcaaagacgctgcgtct
acaaaacacaagcccaagaaccaaggcaaaaaaacagaacaagaacagacaaaaagtgca
aacaacaaaagtagaggagtgaatcagtccaatgttcatcttgaccagcgtaaaaacacc
aattcacaccatcctaaacccaaagatgttgatcagacacaaaataagaaaaaagagata
aaggaccaacttctgaactttctgaaagacccaaacaagacagagctacagtttccttcc
acgctaaattctcatgagcgtatgctggtccatgagctctctgaagaaatgggtttaagg
catgaaagccagggagaagggaaaacccgtcacattactgtgttccggcccccatcagaa
ccggaaaagtcagtggagcccgaacaaccagacgtgactgcatgtacagcagcgaggcta
caagatgagttacagaaaggaccctcaaagccagctgttgatctgaaaagcctgcatttg
gagcgaatgcgccgggagcaggagaaacgagaggagaaaaagcaggaaaaacaacagtgt
gtgagacgggaaccggatctcaatgcaagtaaaagccagtctgttaagaaacccaaagga
acttctaaaggaaacactaagataaaagcaggagccacagatatagctgcaggtgccatg
ccagatgacgattttgatgctctcatcaatgctgtggttaaagccgacagcgtttgtggt
tttgtgaagtgcaaagccagtgtcctgacactagggcagctctgcctctactgtaacaga
caatactgtctgagtcaccatatacctgaggtacacggatgtggagacaaggcaaaagct
caagctagaatgaggataagtaaagaaggagtgctttatgcaggaagtggacagaaggac
aaatcaatggatccaaataaaaaagcttatctgcagagaaaactagactctaaactcaaa
gatttggcatctcaaagaaaaactaaagccaaagacaaagagaactga
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