Onychostoma macrolepis: 131531019
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Entry
131531019 CDS
T09350
Symbol
capn1b
Name
(RefSeq) calpain-1 catalytic subunit b
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
omc
Onychostoma macrolepis
Pathway
omc04141
Protein processing in endoplasmic reticulum
omc04210
Apoptosis
omc04217
Necroptosis
omc04218
Cellular senescence
omc04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131531019 (capn1b)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
131531019 (capn1b)
04217 Necroptosis
131531019 (capn1b)
04218 Cellular senescence
131531019 (capn1b)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
131531019 (capn1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omc01002
]
131531019 (capn1b)
Enzymes [BR:
omc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
131531019 (capn1b)
Peptidases and inhibitors [BR:
omc01002
]
Cysteine peptidases
Family C2: calpain family
131531019 (capn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
131531019
NCBI-ProteinID:
XP_058617551
LinkDB
All DBs
Position
22:complement(24309878..24335005)
Genome browser
AA seq
1403 aa
AA seq
DB search
MSGVASTLAKKRAQAAGFGTNANATKYLNQDFEALRRQCLSGGTLFSDPSFPTAPESLGF
KELGPSSYKTRGIVWKRPGELCSNPQFIVGGATRTDICQGALGDCWLLAAIASLTLNEEV
LARVVPPGQGFGDNYAGIFHFQFWQFGEWVDVVIDDRLPVKDGELVFVHSAEGNEFWSAL
LEKAYAKVNGCYEALSGGSTSEGFEDFTGGIAENYDLSKAPSNMFQIIQKALEAGALLGC
SIDITSASDSEAVTRQKLVKGHAYSLTGATEVNYRGRKEKLIRMRNPWGQVEWTGAWSDG
SSEWNSIAASERPNANAEDGEFWMSFSEFLSHYSRIEICTLTPDAITSDSIKHWAVTNHD
GTWRRGSTAGGCRNNAYTFWMNPQYVIKLDEEDDDPDDNEVGCSFVVGLIQKNRRRLRKA
GEDMHTIGFAIYELPSQFHGQRNVHLDKNFFLTHAQKARSETFVNLREVCTRFKLPPGEY
LVVPSTFEANKDGDFCLRVFSEKQTETLPCDDPVDAELPDETVSDDQVDSGFRGMFLKLA
GADMEISAAELTTILNKIIAKQTDIKTDGFSLETCRIMVNLMDESGNGKLGLGEFATLWK
KVQRYLGIYKKNDMDNSGTISTPELRLALKEAGFTLNNTIFQLLVARYGETDMTLDFDNY
VACLMRLEMMFRVFKKMDPHQSGFIELDFQQLAHTRNLSMYSIGGVSSRIYKERLQAEGM
GNNDNAVKFLNQDYEELKRECVESGRLFEDPCFPAVPQSLGFKELAPHSSKTRDVQWIRP
TELSNNPQFIVGGATRTDICQGALGDCWLLAAIGSLTLNDRLLHRVVPHGQSFTDEYAGI
FHFQFWQFGEWVDVVIDDRLPVKDKELMFVHSAEGNEFWSALLEKAYAKLNGSYEALSGG
STTEGFEDFTGGVAEMYELGKAPKDLHRIIAKALERGSLLGCSIDITSAFDMEAVTFKKL
VKGHAYSVTGLREVNFRGSRERLIRIRNPWGQVEWTGAWSDNSSEWNGIDPAEREEMNNH
MEDGEFWMSFQEFKRQFSRLEICNLTPDALSEDSQNFWNTIKFNGTWRRGSTAGGCRNHP
NTFWINPQYKITLLEEDDDPEDDEVACSFLVALMQKDRRRYRKQGQDMHTIGFALYEVPE
EFHGSQSVHLKKDFFLRHQSCARSETFINLREVSTRLKLPPGEYLIVPSTFEPAKEADFV
LRVFTEKQSETQEMDDEISFNPEDEEEVSEENMEDSFKKMFAQLSGEDMEISVHELRTIL
NRVVGKHRDLKTDGFSLEACRCMVSLMDKDGSARLGIVEFQILWNKIRKWLGIFRQFDLD
KSGTMSSYEMRLAVESAGFKLNNKLHQVIVARYSDGDTIDFDNFVCCLVKLEAMFRTFRE
LDKEGSGIAELNVSEWLYLTMCG
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggagtcgcctctaccctggccaagaagagagcacaggctgcagggtttggaact
aacgccaatgccaccaaatacctgaaccaggactttgaggcgctcaggagacagtgtctc
agcggagggaccctgttctcagacccgtctttcccaaccgcacccgaatccttgggcttt
aaagaactcggacccagctcgtacaaaaccagaggaatagtctggaaaagacctggggag
ctgtgctcaaacccacaattcatcgtcggtggagctacacggacggatatctgtcaagga
gctctgggtgactgctggctgctagcggccattgcctctctgaccctgaatgaagaagtt
ctggcgcgagtggtgccccctggacagggcttcggtgacaattatgctggaatcttccat
ttccagttctggcagtttggcgagtgggtggatgttgtcattgatgaccggctgccggtg
aaagatggcgagctggtttttgttcactccgccgagggaaacgagttttggagcgccctg
ctggagaaggcctatgcgaaggtgaacggctgttatgaagctctgtctggaggatccacc
agcgagggttttgaggatttcactggaggcattgctgagaactatgatctgagcaaagct
ccttccaacatgtttcagatcatccagaaagccctggaggctggagctttgctgggctgc
tccatcgatatcactagtgcctctgactctgaagccgtcacccgacagaagctggtgaaa
ggccacgcttactcgctcacaggggcgaccgaggtgaactatcgtggccgcaaggagaaa
ctgattcgtatgcgcaacccttgggggcaggtggagtggaccggagcctggagtgatggt
tcatccgagtggaacagtattgccgcttcagagcggccgaatgccaacgctgaggatgga
gaattctggatgtccttctcagaattccttagccattactctcgtatagagatctgcact
ctgaccccggacgccatcaccagcgattcaattaaacactgggccgtgaccaaccacgac
ggcacatggaggagaggctctactgctgggggctgcagaaacaacgcctacacattctgg
atgaatcctcaatatgtgattaagctggatgaagaagatgatgatccagatgataatgag
gtgggctgcagtttcgtggtgggtttgattcagaagaaccggcgccgtctgaggaaagca
ggagaggacatgcacactattggctttgctatttatgagttaccttcacagtttcacggt
cagcgcaatgtacacctcgataagaacttcttcctgacgcacgcgcagaaagctcgctct
gagactttcgttaacctgagagaggtctgcacacgcttcaagctgcctcctggagagtac
ctcgtcgtgccgtccaccttcgaggccaacaaggatggagacttttgcctgcgcgtcttt
tccgaaaaacagaccgaaacactaccatgtgatgaccctgtggatgctgaattacctgat
gagactgtctcagatgatcaagttgattctggattcagaggcatgttcttaaaactcgct
ggagctgacatggaaatctcagccgcagagctcacgactatcttaaacaaaatcatcgcg
aaacaaactgacataaagacagacggcttcagtttggagacgtgtcgtatcatggtgaac
ctcatggatgagagtgggaatggaaaactgggtttgggagagttcgctactctgtggaag
aaagttcagcgataccttggaatttacaagaagaatgacatggataattcaggaaccata
agcactccagagctgcgtttggcgctgaaggaagccggtttcactcttaataacactata
ttccagctactggtagcacgttacggagagacagacatgactcttgactttgataactat
gtggcctgcctcatgcgtctcgagatgatgttccgggtattcaaaaagatggatccccac
caaagtggcttcattgagctggactttcagcagcttgcccacacaaggaacttaagtatg
tattcaattggaggagtgtcgtcgcgtatctacaaggaacgcctgcaggcagaagggatg
ggaaacaatgataatgcggtcaagttcctgaatcaggactacgaggagctgaagagagag
tgtgtggagagtgggaggctgtttgaagacccctgcttccctgccgtgcctcaatcactg
ggcttcaaggagctcgcgccacactcctccaaaacacgtgatgtgcagtggataaggccc
actgagctgtcaaacaatcctcagttcatagtgggcggagccacacgtacagatatttgc
cagggggccctaggtgactgttggctgttagctgccattgggtccctgactttaaacgac
agactgcttcacagagttgtacctcatggacaaagctttacggacgagtatgccggcatc
ttccacttccagttctggcagtttggcgagtgggtggacgttgtgattgatgaccgtttg
cctgtgaaggataaagagctgatgtttgttcactcagcagagggaaatgagttttggagt
gccctgctggaaaaagcctatgccaagctgaatggctcttatgaagctctgtcaggaggg
tccaccaccgaaggctttgaggacttcacaggtggagtggccgagatgtacgagctgggt
aaagctcccaaagacttgcaccgcatcattgccaaagccttggagagaggctcactgttg
ggctgctctattgatatcaccagtgccttcgatatggaggctgtaacctttaagaagctg
gtgaaggggcatgcatactccgtcacgggtctcagagaggtgaatttccgtggcagcaga
gaaaggctgatccgcatccgaaacccttggggacaagttgaatggacaggggcttggagt
gataattcttctgagtggaatgggattgatccagcagagagagaggaaatgaacaaccac
atggaagatggcgagttctggatgtcatttcaggagttcaaacgccaattttctcgtctg
gagatctgtaacctcacgccagatgctctgagtgaagattctcaaaatttctggaacacg
attaagtttaacggcacctggaggagaggaagtacagcagggggctgcaggaaccacccc
aatacattctggataaatcctcagtataagatcacgctgctagaggaagatgatgatcct
gaggatgatgaggtggcctgcagcttcctggtggccttgatgcagaaggacaggcgtcgt
taccgcaagcaagggcaggacatgcacaccatcggcttcgccttatatgaggtcccagaa
gagtttcatggttcccagagcgttcacctcaagaaggactttttcttgcgtcaccaatcc
tgtgcgcgctcagaaaccttcattaacctgcgggaagtcagcacacgactgaagctgcca
cctggcgagtatctcatagtcccttccacttttgagcccgcaaaagaagccgatttcgtc
ctgcgagtcttcactgagaaacagtcagaaactcaagaaatggatgatgagatttcattt
aaccccgaggatgaagaggaggtttcagaagagaacatggaagactcttttaaaaaaatg
tttgcgcagctgtctggagaggacatggagatttcagttcatgagctcaggaccattctg
aaccgagtggttggcaaacacagggacttgaagacagatgggttcagtttggaggcgtgt
aggtgcatggtcagcctgatggataaagatggcagtgctcggctgggaattgtggagttc
cagattctgtggaataaaatcaggaagtggctgggcatttttagacagtttgatctggat
aaatctggcacaatgagctcgtatgaaatgcgcctcgctgtggagtcagctggttttaaa
ctcaataacaagctacatcaagtaattgtggcgcgatattctgatggagatacgattgac
ttcgacaattttgtctgttgcctggtcaagctggaggccatgttcaggacttttagagag
ctggacaaagagggctcaggcatcgcagagctcaatgttagtgagtggctgtacctgacc
atgtgtggttga
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integrated database retrieval system
