Onychostoma macrolepis: 131531996
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Entry
131531996 CDS
T09350
Symbol
pan2
Name
(RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
omc
Onychostoma macrolepis
Pathway
omc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131531996 (pan2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131531996 (pan2)
Enzymes [BR:
omc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
131531996 (pan2)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131531996 (pan2)
mRNA degradation factors
3'-5' decay
Pan complex
131531996 (pan2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAN2_N
UCH_1
RNase_T
UCH
WD40_like
WD40_CDC20-Fz
Beta-prop_THOC3
Motif
Other DBs
NCBI-GeneID:
131531996
NCBI-ProteinID:
XP_058619247
LinkDB
All DBs
Position
23:complement(10868696..10898622)
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AA seq
1208 aa
AA seq
DB search
MMNFEGLDPGLGEYTPGLHGGLEPGLDSSMDPRLDPALLQGVELDPDALAVPVSESMHIV
EGMYSELHSVAAEVGIPVAATHFDLQEELLWMGNHRGHASSFFGPTMGRYSSFQVHMTDD
IRHIQSMDTGVLFLTKNNLKCITRGGLIMFDYTTEEGADMHSLILTDNNTLLMGGLQNYV
AELDLTTVQETQKFTVEVPGVAIMRQSNRFFFCGHTSGKVSLRDVRTFKMEHEFDAFSGS
LSDFDVHGNLLAACGFSSRGLNGLSCDRFLMVYDLRMMRAITPLQVHVDPLFLRFIPTYT
SRLAIISQTGQCQFCEPTGLANLADIFHVNTVGQLLMSFDVSSSKQALSFGDSGGCVHLW
SSAPEVSFNSYSRETELALPCLVDSLPQLDWNHELMPLSLLPMPLTSTEPLLSDWPTALI
MPSPRRAPPVDPEILRTMKTVGFIGYAPNPRTRPRNQVPYKIKDTELEYDSYNQVPESPI
GRDEEPHLYMVPKKYRKVTIKYSKLGLEDFDFKHYNRTLFAGLEPHIPNAYCNCMIQVLY
FLEPVRCLVQNHLCQKEFCLACELGFLFHMLDLSRGDPCQASNFLRAFRTIPEASALGLI
LADSDEQTGKARLGRLIQSWNRFILAQLHQETLEQEGPQAYRGASSSSTMGSSGESVIGR
LFGCEVENSSLCRCGKETVRSSLTLLFTMHYPEQSSLDKTIEEYDFAEILKKSICLEQST
QAWCDNCEKYQPTVQTRNIRCLPDVLVINCEVNSTKEAEFWKAQTEYAYNKALKKEAAEP
PKPKEPLPTEWCLEEELCSVEGLTFDTQAEDMRHVWIPLSLKMCISKTQGLEVSSLSEGE
ELTESEEAEGASVYDLVVTVSHIQDARTGGNLVAHIKVGETYHQRKEGVTHQQWYLFNDF
LIEPIDKAESAQFDVNWKVPAVLYYVKRNYHPKYDLRIKNPIDASVLLTEASLARKQRKS
HATFIPLMVSEMPQAADLVGLDAEFVTLNQEEAELRSDGTKSTIKPSQMSVARITCVRGQ
GPNEGVPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDTG
VRFVGHGLQKDFRVINLMVPKEQVIDTVYLFHMPRKRMISLRFLAWCFLDLNIQSETHDS
IEDARTALQLYRKYLELSHNGGHEEFRKVLKTLYEKGRKLDWKVPDIDSADGQGSPKSTA
VFPSVMGL
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgatgaactttgagggtctggacccaggtttgggcgagtacacgcccggcctgcatggc
ggcctggagcccggactggactcttcaatggacccacggcttgaccctgcgctgctgcag
ggtgtggagctcgaccccgacgcgctggctgttcccgtgtccgaatccatgcacatagtg
gagggcatgtactcggagctgcacagtgtggctgctgaagttgggatccctgtggcggca
acacatttcgatctgcaggaggagctgctgtggatggggaaccaccggggacatgcaagt
tccttctttggtccgacaatgggccgctactcctctttccaggtgcacatgaccgatgat
attcgccacatccagagtatggacacaggggtgctgtttctgaccaaaaacaacctcaaa
tgcattacgcgaggaggtttaattatgtttgattatacaacggaggagggtgctgacatg
cacagtttgattctgactgataataacacattgttaatggggggtctgcagaactatgtg
gccgaattggacctcacaacagtacaggaaacacaaaaatttactgttgaggtgcctgga
gtcgccattatgagacagtccaatcgcttcttcttttgtggtcacacatctggcaaggtg
tctctgcgtgatgtccgcacatttaaaatggagcacgagtttgacgcgttctctggcagc
ctgtctgatttcgacgtacacggtaacctgttggcagcgtgtggcttctcgagccgtggc
ctgaatggactgtcatgtgaccggtttctcatggtgtacgacctgcgcatgatgagggcc
atcaccccactgcaggttcacgtggatccccttttcctccgcttcatccccacatacacc
tcccgcctggctatcatttcacaaacaggtcagtgtcagttctgtgagcccaccggcctg
gccaatctggctgatatcttccacgtcaacacggtggggcagctgctgatgagctttgat
gtgtcctccagcaaacaggcgctctcctttggggactctggtggctgtgtgcacctgtgg
tccagcgccccagaggtgtcctttaacagttactccagggagacagagttagctctaccc
tgtctggtggactccctgccccagctggactggaaccatgagctcatgcctctgtctctt
ctgcccatgcccctcaccagtaccgagcccctgctctctgattggcccaccgctctcatc
atgcccagccccagacgagcccctccggtagatccagagattcttaggactatgaaaact
gtgggctttattggatacgcccccaatcctagaacccgtcccagaaaccaggttccttat
aagattaaagacacagaacttgaatatgacagctataatcaggtcccggaatctcctatt
ggtcgagatgaggagccgcatctttacatggttccaaagaaatacaggaaggtcaccatt
aaatattccaaactgggactggaggactttgattttaagcactataaccggactttgttt
gctggtttggagcctcacatacccaacgcttactgcaactgcatgatccaggtgctgtac
ttcctggagccagtcaggtgcctggttcagaatcatttgtgtcagaaggagttctgtctg
gcctgtgagctgggattcctttttcacatgctggacttgagcagaggagacccctgccag
gccagtaattttctccgggctttccggacaatcccggaggcatcggcgttaggtttgatc
ctggctgactctgatgagcagacagggaaagcccgtctaggccgtctcatccaaagctgg
aaccgtttcattcttgcacagctgcatcaggaaacactggagcaggaagggccgcaggca
tacagaggagccagcagcagcagcacgatgggttcctcgggggagtctgtgattggccgg
ttgtttggctgtgaagtggagaacagcagtttgtgtcgctgtggaaaggagacagttcgc
tcgtccttgactctgctgtttaccatgcactaccctgagcagagctctctagataagacg
atagaggaatatgactttgcagaaatcctgaagaagagtatatgtctggagcaaagcaca
caggcctggtgtgacaactgtgagaaataccagccaacagtgcagaccaggaacattcgc
tgtctgcctgatgttctggtgatcaactgtgaggtgaacagcactaaggaggcagagttc
tggaaagcacagactgagtatgcgtacaacaaagctttaaagaaagaagcagctgaacct
cccaaacccaaagagcctttaccgacagaatggtgtttagaggaagagctgtgcagcgtg
gagggcttgacctttgacactcaagcggaggacatgaggcatgtgtggatccctctcagt
ctgaagatgtgcatcagtaagactcagggcctggaggtcagcagcctgtctgagggagag
gagctgactgaaagtgaagaggcagaaggagcatctgtctatgacctggtcgtcaccgta
tctcatatccaggatgcccgaaccggaggaaacctggtagcacatatcaaagtgggcgag
acctaccatcaaaggaaagagggagtaacacaccagcagtggtatctgttcaacgatttt
ctgattgagcctattgacaaggcagaatcagctcagtttgatgtgaactggaaggttcct
gctgtactttactacgtcaagaggaactaccatcccaagtatgatttgcgaattaagaac
cctattgatgccagcgttctgctgacggaggcctcgttggcacggaaacagaggaagagt
cacgccaccttcatacctctaatggtgagcgagatgccgcaggctgcagaccttgttgga
ttggatgcagaatttgtcacgctcaaccaggaagaggcagaactgcgcagtgacgggacc
aagtccaccattaagcccagccagatgtctgttgctcgtatcacatgcgtgagaggccag
ggacccaatgagggagtgccgttcattgatgactacatatcaacacaggaacaggtggtg
gactacctgacccagtactctggtatcaaacctggagacctggatgcaaagatttcctct
aaacacttgactactctgaaatctacatatctgaaattgcgttttcttatcgacactggc
gttcgctttgttggccacgggttacagaaagatttccgggtcataaacttgatggttcca
aaagaacaagtgattgacaccgtctacctcttccacatgcctaggaagcgaatgatctct
ctacgttttctcgcgtggtgctttctcgatctgaacattcagagcgaaactcatgatagt
atcgaagatgcacggactgccctacagttgtacaggaagtacttggagctgagtcataat
ggaggacatgaagagttccggaaggttctcaagactctctatgagaaaggacgcaagcta
gattggaaagttccggacattgactctgcagatggtcaaggtagcccaaaaagtacagcg
gtgtttccctctgtgatggggttatga
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