Onychostoma macrolepis: 131534184
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Entry
131534184 CDS
T09350
Symbol
cnot1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
omc
Onychostoma macrolepis
Pathway
omc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131534184 (cnot1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131534184 (cnot1)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131534184 (cnot1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
131534184 (cnot1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Med13_C
Motif
Other DBs
NCBI-GeneID:
131534184
NCBI-ProteinID:
XP_058622865
LinkDB
All DBs
Position
25:11630493..11653740
Genome browser
AA seq
2374 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECVSLITKPNFISTLCYAIDNPLHYQKSLKPSPHLFTQLSKVLK
LSKVQEVIFGLALLNSSNADLRGFAAQFVKQKLPDLLRSYVDADLGGNQEGGFQDIAIEV
LHLLLSHLLFGQKGSSGVGQEQIDAFLKTLCRDFPQERCPVVLAPLLYPDKRDILMDRIL
PDSGELNKTMMESSLADFMQEVGYGFCASLEECRNIILQYGVREVTASQVARVLGMMART
HSGLSDGIGLQSISNPVGGGIWSDGKDKSDGSQAHTWNVEVLIDVVKEVNPNLNFKEVTY
ELDHPGFLIRDSKGLQIVVFGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLMSPEVF
CFADYPCHTVAIDILKAPPEDDNREIATWKSLDLVESLLRLSEVGHYEQVKQLFSFPIKH
CPDMLVLALLQISTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIM
HSMAEWYMRGEQYDQAKLSRILDVAQDLKSLSMLLNGTPFAFVIDLAALASRREYLKLDK
WLTDKIREHGEPFIQACVTFLKRRCPSIMGGLAPEKDQPKSAQLPPETLATMLACLQSCA
GSVSQELSETILTMVANCSNVMNKARQPPPGVLPKGRAPSTSSLDAISPVQMDPLSAMGS
LSLGVSSTSHTPSMQGFPNLQGSAFSNPQSPAKAFSNLPNPNPSTAFPINPLSSQLQGPL
STSLTGIGSGLGMPAVSSDPFGTRKMSTPGLNPPTFQQTDLSQVWPEANQHFSKEIDDEA
NSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYRFFPQYPDK
ELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDY
PQYCQHLASIAHFLQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSLALAQAQAQSQTPK
APQPGQASTLVTTATTTTTAAKTTTITRPTAVGPKKDVPPSINTTNIDTLLVATDQTERI
VEPPENVQEKIAFIFNNLSQSNMSQKVEELKETVKEEFMPWVSQYLVMKRVSIEPNFHSL
YSNFLDTLKNPEFVKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMITLAKNK
PILYTDLELKSLLLEAYVKGQQELLYVVPFVAKVLESSLRSVIFRPQNPWTMGIMNVLAE
LHQEHDLKLNLKFEIEVLCKNLSLDISELKPGNLLRDKEKLKNLEEQLSAPKKETKPPEE
MLPIVTTDSVPFTAAPSTPATTTTCTATGPPTPQFSYHDINVYALAGLAPHINININIPL
LQAHPQLKQCVRPAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESHMRVAAH
HMMRNLTAGMAMITCREPLLMSIATNLKNSFAAALRAPTPQQREMMEEAAARVAQDNCEL
ACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPMVLTYQAERMPEQIRLKVG
GVDPKQLAVYEEFARNVPGFLPSNDLSQPTGFLAQPMKQQAWPTDDVAHIYDKCISDLEQ
HLHAIPPALAMNPQTQAIRSLLEAVVMARNSRDGIAALGLLQKAVEGLLDATSGADPDLL
LSYRECHLLVLKALQDGRAYGPQWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQQ
YDLHLAQSMENGLNYMAVAFAMQLVKLLLVDERSVSHITEADLFHTIETLMRTNAHSRAN
APEGLPQLMDVVRSNYEAMIDRHHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWVN
LYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHPT
TSPAIIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLIQDHDVRQ
TEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLELI
SHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELNKPMQILYKGTLRVLLVL
LHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINIAP
RILTNFTGVMPSQFKKDLDSYLKTRSPVTFLSELRSNLQVSNEPGNRYNIQLINALVLYV
GTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTH
YFSCTMLYLFAEANAEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWSHDF
VHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7125 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggctttgtctcaaatcagctacctggtggacaattta
actaagaaaaactacagagccagccagcaggaaatacaacatattgtgaatcgtcacggc
cctgaggcagaccggcatttattacgctgtctcttttcccatgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccaccagacacaatttctgatccaggagtgtgtgtct
cttattacgaaaccaaattttatttcaacgctttgctacgccattgacaatcccctgcac
tatcaaaagagtttgaaaccatcacctcacttatttactcagctgagtaaggttctcaag
ctaagcaaggttcaggaggtgatttttggccttgctctgctgaactctagtaacgcagac
ctccgagggtttgctgctcaatttgtgaagcagaagctccctgacctcctccgctcgtac
gtggacgcagacctcggagggaatcaggaaggtggcttccaggatattgccatagaggtt
ctgcatctgctcctctcccatcttctgttcggtcagaagggctcgagcggagtcggacaa
gagcagattgacgcgttcctcaaaacactgtgcagagatttcccgcaggagcgctgtcct
gtggtgcttgcaccactgctgtaccctgacaaacgggacattctcatggacaggatcctg
ccagactctggagaattaaacaagaccatgatggagagttcacttgctgacttcatgcaa
gaagttggctatggcttttgtgcgagtcttgaagagtgcaggaacataatcctgcagtat
ggggtgcgagaggtgacagccagtcaggtggccagagtgctgggcatgatggcccgcact
cactctgggctgtctgatggcatcggcctacagtccatctcaaatccagtgggcggtggg
atctggagtgatgggaaggacaagagtgacggctctcaggcccacacctggaatgttgaa
gttctaattgatgtggtcaaagaagtgaaccccaatctgaatttcaaagaggtgacctat
gagctggatcacccaggcttcctgatccgggacagtaaggggcttcagatagtggtcttt
ggtatccagaggggtctgggaatggaggtcttcccagtggatctcatctacagaccatgg
aagcatgcagaaggacagctgtcattcattcagcactcgctgatgagtccagaagtcttc
tgctttgctgactacccctgtcatactgttgccattgacatcctgaaggccccacctgag
gatgacaacagagaaatagccacatggaagagcttggacctagtggagagcctcttgcgc
ctctctgaagtcgggcattatgaacaggtgaagcagctcttcagcttccccatcaagcac
tgcccggacatgctagtgctggcgcttctgcagatcagcacctcctggcacaccctgcgt
catgagctcatctccaccctcatgcccatcttcctgggcaaccaccccaactctgccatc
atcttgcactatgcctggcatggacagggccagtccccctccatccgccagctgatcatg
cactctatggctgagtggtacatgagaggagagcaatacgaccaggccaagctatcccgc
atcctggatgtggctcaggacttgaagtctctatcgatgctgctgaatggtactccattt
gcctttgttattgaccttgctgcacttgcctctcgccgtgaatacctcaaacttgacaaa
tggctcactgacaaaattcgagagcacggggagccgttcatccaggcgtgtgtcacattc
ctgaagagacgttgtccctctatcatgggtggtttggccccagagaaagaccagccgaaa
agtgctcaacttcctcctgaaacactggctaccatgcttgcttgtctgcagtcttgtgct
gggagtgtgtctcaagagctgtcagagacaatcttgaccatggtggccaactgcagcaat
gtgatgaacaaggccaggcagccgccaccaggagtcttgccaaagggacgagctcccagc
accagcagcttagatgctatttcacctgtgcagatggaccctctctctgcgatgggctct
ttgagtctaggtgtctcgtccacctctcacaccccgagcatgcaaggattccccaacctg
cagggctctgccttcagtaacccccagtccccagccaaagccttctcaaacctgcccaac
cctaaccccagtacagctttcccaatcaaccccctctcttctcagctccaaggtcctctg
agcacaagcttgactggtattggctcaggtttgggcatgcccgctgtcagcagtgacccc
ttcggcaccaggaagatgagcacaccggggctgaacccacccaccttccagcagactgac
ctctctcaggtgtggccagaggcaaaccagcactttagtaaggagatagacgatgaggca
aacagctacttccagcgcatctacaaccatccgccgcaccccacgatgtctgtggatgag
gtgctggaaatgctgcagagatttaaggactcgaacatcaagcgggaacgggaagttttt
aactgcatgctgaggaatctgtttgaggagtaccgattcttccctcagtatccggacaaa
gagctacacatcaccgcttgcctctttggggggatcattgagaaaggcctggtcacatac
atggcactgggcttggccttacgatatgtcctggaagccttacgcaaacctttcggatca
aagatgtattactttggaatcgctgcactagatagatttaaaaatagactgaaggactat
ccccaatattgtcagcacttggcgtcaatagcccatttcctgcagtttccgcaccattta
caagagtatatagagtatggccagcagtccagagaccctcctgtgaagatgcaaggctcc
attaccaccccaggtagcctggctttagcccaggctcaagctcagtctcagacccccaaa
gcccctcaacctggccaggccagcaccttagtgaccacagccaccacaaccacaaccgct
gccaaaaccaccaccatcacgagacctacagctgttggaccgaagaaggacgtgccacct
tcaatcaacaccacaaacattgacaccttgttggtggccacagaccaaaccgaaaggatc
gttgagcccccagagaatgttcaggagaagattgcattcatcttcaacaacttgtcccaa
tcaaacatgtcccaaaaggtggaggagctgaaagagactgtgaaagaagaattcatgccc
tgggtctctcagtacctggttatgaagcgtgtcagcattgagcccaacttccacagcctg
tattctaacttcctggacacactgaaaaacccagagtttgtcaagatggttctcaatgag
acttacagaaacatcaaggtccttcttacctctgataaggcagctgctaacttctcagat
cgatccctgctgaagaatttgggtcactggcttggaatgatcaccctagctaaaaacaaa
cccatcctgtacacagacctggagctgaaatctctcttgctggaggcttatgtgaaaggc
caacaggagttactgtatgtcgtcccctttgtggccaaagtcttggagtcaagtctacgg
agtgtgatcttcagaccgcagaacccttggaccatgggtatcatgaatgtactggctgag
ctccaccaggaacatgacttaaagcttaacctcaagtttgagattgaggtgctctgcaag
aatctgtctttggacatcagtgagctaaaaccaggaaacctactgagagacaaagagaag
ctgaagaacttagaggaacagctctctgcaccaaagaaagagaccaagcctcctgaagag
atgctgcctatagttacaacagattctgttccatttacagctgctccgtcaactccggcc
accaccacgacctgtacggctactggaccgcccacaccacagttcagctaccatgacatc
aatgtgtatgccctggctggcctggccccacacatcaacatcaatattaacatcccatta
ctacaggcccaccctcagctgaagcagtgtgtgagacccgcaattgagcgtgctgtacag
gaactggttcacccagtggtggaccgatccatcaagatcgccatgaccacctgtgagcag
atagtcaggaaggacttcgcactagattctgaggagtctcacatgcgtgtggccgcccac
cacatgatgcgtaacctgaccgctggcatggccatgatcacctgcagggagcctctgctc
atgagcattgccaccaacctgaagaacagctttgctgcagctcttagggctcccacacct
cagcagagagagatgatggaagaggcagctgctcgtgttgcacaggacaactgtgagctt
gcttgttgctttatacagaagacagcagtggagaaagctggaccagagatggacaagaga
ctggcaactgaattcgagctaaggaagcacgctcgccaagaaggccgtcgctactgtgac
cccatggtgctcacctatcaggctgagcgcatgccagagcagatcagactgaaggtcggt
ggagtggatcctaaacagctggctgtttatgaggagttcgcccgtaatgttccaggcttc
ctacccagtaatgacctgtctcagcccactggtttccttgcccaaccaatgaagcaacag
gcatggcctacagatgatgtggctcacatctatgataagtgcatttcagacctggagcag
cacctgcatgcaattccacctgccctggccatgaacccacagacccaggccatacgtagc
cttctggaggctgttgtcatggctagaaactcccgtgatggcatcgctgccctgggcctt
ttgcagaaggctgtcgagggtctgctggatgccaccagtggtgctgatcctgatctttta
ctgagctacagggagtgccacctactggtgctgaaggccctacaagacggtcgtgcctac
ggcccacagtggtgcaacaaacaaatcaccagatgcctgattgagtgcagagatgaatac
aagtacaacgttgaggccgtagagctcctcatcagaaaccacctggtcaacatgcagcag
tatgacttacacctggctcagtccatggaaaacgggctcaactacatggccgtagcattc
gccatgcagctggtgaagctcctactggttgacgaacgtagcgtgagtcacatcactgaa
gcagatctcttccacaccattgagacgctgatgaggaccaatgcccactccagagccaat
gctcctgaaggtttgccccagctgatggatgttgtccgctccaactacgaggccatgatc
gatcgtcatcatggtgggccgaacttcatgatgcactctgggatttctcaagcctctgag
tacgatgacccaccaggccttagagagaaggcagagtacctgctcagagaatgggtcaac
ctgtaccactcagcagctgcaggaagagacagcaccaaggccttctctgcatttgttggc
cagatgcaccagcagggcatcctgaagaccgatgacctgatcactcgcttcttccggctg
tgcacagaaatgtgcgtggagatcagttaccgtgctcaagccgaacagcagcacccgacc
accagccccgccatcatcagagccaagtgctaccataacctggatgcttttgttcggctc
attgcgcttcttgtcaaacactccggagaggccaccaacacggtcaccaaaattaacctg
ctcaacaaggttctaggcattgtggtgggtgtattgatccaggatcacgatgtgaggcag
acagagttccagcagcttccgtaccacagaatcttcatcatgctcctgctggagcttaac
gcaccagagcatgtgctggagaccatcaacttccagaccctcactgccttctgcaacacc
ttccatatcctgaggccaactaaagcacctggttttgtctatgcttggctggagctcatc
tcgcaccgcatcttcattgccaggatgcttgcgcataccccacaacagaagggttggcca
atgtatgcccagctgctgatagacttgttcaagtatcttgcacccttcttaaggaatgtt
gaactcaacaaacctatgcaaattctctacaagggaacacttcgtgtgctgcttgtcctg
ctacatgactttccagaattcctgtgcgactaccattatggcttctgcgatgtcatccct
cccaactgcatccagctgaggaacctgatcctgagtgccttcccccgcaacatgaggctt
ccagaccccttcacccctaatctgaaggtggatatgctgagtgagatcaacatcgcaccc
cgcatcctcactaacttcaccggtgtgatgccgtcccagtttaagaaggatcttgactcc
tacctcaagacccgttctcctgtcaccttcctttctgagctgcgcagcaacctgcaggtg
tccaacgagccaggcaaccgttacaacattcagctgatcaatgctctggtgctctacgtt
ggaacccaggccattgcccacatccacaacaagggcagcactccctccatgagcaccatc
actcactcggctcacatggacatattccagaacctcgcagtcgatctagacactgagggc
cgctatctgttcctgaatgcgatagccaatcagctgcgttatccaaacagccacacacac
tactttagctgtaccatgctgtatctgtttgccgaggccaacgctgaagccattcaagag
cagatcaccagggtcctgctggagaggctgattgtgaacaggccgcacccgtggggtctg
ctcatcaccttcattgagctgatcaagaaccctgcctttaagttctggagccatgatttt
gtgcactgtgccccagagatcgagaagttgttccagtcggtggctcagtgctgcatgggg
cagaagcaggcccagcaggtgatggagggaactggtgccagttag
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integrated database retrieval system
