Onychostoma macrolepis: 131540659
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Entry
131540659 CDS
T09350
Symbol
tnpo1
Name
(RefSeq) transportin-1
KO
K18752
transportin-1
Organism
omc
Onychostoma macrolepis
Pathway
omc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131540659 (tnpo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131540659 (tnpo1)
03009 Ribosome biogenesis [BR:
omc03009
]
131540659 (tnpo1)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
131540659 (tnpo1)
Ribosome biogenesis [BR:
omc03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
131540659 (tnpo1)
Pre-60S particles
131540659 (tnpo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
TPR_IMB1
HEAT_GCN1
HEAT_2
Vac14_Fab1_bd
TOR1L1_N
Arm
Cnd1
IBN_N
TPR_IPO5
TPR_DNAAF5
HEAT_EF3_N
HEAT_MROH2B_C
PDS5
CEP104-like_TOG
Adaptin_N
HEAT_GCN1_C
MMS19_C
UNC45-central
HEAT_Maestro
Dopey_N
TPR_TTI1_C
VPS15-like_hel
DUF3689
Motif
Other DBs
NCBI-GeneID:
131540659
NCBI-ProteinID:
XP_058631752
LinkDB
All DBs
Position
05:16931949..16962556
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AA seq
891 aa
AA seq
DB search
MECQWKPDEQGLQQILQLLKESQSPDTSTQRSVQQKLEQLNQYPDFNNYLIFVLTKLKTE
DEPTRSLSGLILKNNVKAHYQNFPNGVSDFIKNECLQNIGDSSPLIRATVGILITTIASK
GELQNWPELLPKLCLLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNVMIPKFL
QFFKHSSPKIRSHAIACVNQFIISRTQALMLHIDPFIENLFALAGDEEPEVRKNVCRALV
MLLEVRLDRLLPHMHNIIEYMLQRTQDQDENVALEACEFWLTLAEQPVCKEVLCGHLPKL
TPVLVNGMKYSEIDIILLKGDVEEDEAIPDNEQDIRPRFHRSRTVAQQHEGGDSIEDEED
DEDDLDDDETISDWNLRKCSAAALDVLANVFRDDLLLHILPLLKELLFHPEWLIKESGIL
VLGAIAEGCMQGMIPYLPELIPHLVQCLSDKKALVRSITCWTLSRYAHWVVSQPPDIYLK
PLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFGKYQHKNLL
ILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNQLKDEDKDLFPLLECLSSVATALQS
GFLPYCEPVYQRCVNLVQKTLSQAVLHQTQPEFYEAPDKDFMIVALDLLSGLAEGLGGNI
EQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIANFMPILGTNLNP
ELISVCNNATWAIGEIAIQMGSEMQPYVQMVLQQLVEIINRPNTPKTLLENTAITIGRLG
YVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMITVNPGGVVQDFIFFCDAV
ASWMNPKDDLREMFYKILHGFKNQVGDENWRRFSDQFPLPLKERLAAFYGV
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggagtgccagtggaaacccgacgagcagggacttcagcagatcttacagctgctcaag
gaatcacagtcccccgacacatccacgcaacgatccgtccaacaaaaacttgagcagctc
aatcaatacccggacttcaacaactacctgatatttgtgctcacaaagttaaagacagaa
gatgagcccactcggtctctcagtggtctcattttgaagaacaacgttaaggcccattac
cagaacttcccaaacggtgtgtctgacttcatcaaaaatgagtgcctgcaaaacattgga
gactcctcaccactcattagagccacagtgggtattctgatcacaactatagcctctaaa
ggggagttacagaactggccggagcttctacctaaactctgtttactgctggactcagag
gactataatacttgtgaaggggcttttggagcactgcagaaaatctgtgaggactctgct
gagatcctggacagtgacgtgctggaccgaccactcaacgtgatgatccccaagtttctg
cagttcttcaagcacagtagccccaagatcaggtcacatgccattgcctgtgtgaaccag
ttcatcatcagcagaacacaggccctgatgttgcacatagatcctttcattgagaacctg
tttgcactggcaggcgatgaggagcccgaagtgaggaagaatgtgtgcagagctttagtc
atgctcttggaagtcagattagaccgtctccttcctcacatgcacaacatcattgagtac
atgttgcagaggacacaagatcaggatgaaaatgtcgctctggaggcctgtgaattttgg
ctcactcttgccgagcagcctgtgtgtaaggaggttctgtgtggacacctgcctaaattg
actccagttcttgtgaatggaatgaagtattccgagattgacataatcctgttgaagggt
gatgttgaggaggatgaagctatcccggacaatgagcaggacattcgcccaaggttccat
cgctcacgcactgtggcccaacaacacgagggaggagactccattgaggacgaggaggat
gatgaagatgatttggatgatgatgaaaccatctcagactggaacttgaggaaatgttct
gcagctgcactagatgtcctggcgaatgttttcagagatgatttactgctgcatattctt
cctttactgaaagaactactgttccatccagagtggcttattaaagagtctggcatactt
gtactgggagccattgctgaaggctgtatgcaggggatgatcccctacttgccagagttg
attcctcatttggtacagtgtctgtctgataagaaggcgctggttcgatccatcacttgc
tggactctaagccgctacgcacactgggttgttagccagccccccgatatctacctcaaa
ccgctcatgactgaactcctcaaacggatacttgacagcaacaagcgtgtccaagaggcc
gcctgcagtgcctttgctaccctggaagaggaggcttgcactgagctggtgccgtacctt
gcttatattttggacacgttggtttttgctttcggtaaataccagcacaagaaccttctc
atcctctatgatgccattgggactctggcagactctgtgggccaccatctcaacaaacca
gaatatattcaaatgctgatgcctccattgattcaaaaatggaaccagctaaaggatgaa
gataaagacctctttcccttactggagtgtctctcatctgtggccaccgccctgcagagc
ggcttcctgccatactgtgaacctgtctaccaacgctgtgtcaacctggtccagaaaaca
ctctcccaggccgtgctccaccagactcagcctgagttttatgaagctcctgataaagat
ttcatgattgtggctctggatcttctcagcgggttagcagagggtcttggagggaacatt
gaacagctagttgcccgtagcaacattctcactctcatgtaccagtgcatgcaggataaa
atgccagaggttcggcagagttcttttgctctgttgggagatctgaccaaagcctgcttc
cagcatgtcaaaccttgcatcgctaacttcatgcctatcctaggcacaaacctgaaccca
gagttgatatcagtctgcaacaatgcaacatgggccattggagaaatagccattcaaatg
ggttctgagatgcagccgtatgtacagatggttttacagcagcttgtggagatcataaac
agacccaacacacccaagacactgctggaaaatacagcaataacaattggtcgtcttggt
tacgtttgtcctcaagaggtggcacccatgctacagcagtttataagaccctggtgcacc
tctcttcgcaatataagagacaatgaagaaaaagactctgcgttcagaggaatctgcacc
atgatcacggtcaaccctggtggtgtggtgcaggactttatatttttctgtgatgctgta
gcatcctggatgaacccaaaagacgatcttcgagaaatgttctacaagatcttgcatggg
tttaagaaccaggttggagacgagaattggagacgcttttctgaccagtttccccttcca
ctcaaagaaagacttgcagccttctatggggtgtag
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