Onychostoma macrolepis: 131543518
Help
Entry
131543518 CDS
T09350
Symbol
strc1
Name
(RefSeq) stereocilin isoform X1
KO
K24636
stereocilin
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omc03037
]
131543518 (strc1)
Cilium and associated proteins [BR:
omc03037
]
Other cilia and associated proteins
Stereociliary proteins
131543518 (strc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Stereocilin
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
131543518
NCBI-ProteinID:
XP_058636881
LinkDB
All DBs
Position
07:complement(30220521..30241632)
Genome browser
AA seq
2009 aa
AA seq
DB search
MHHGGRLMLLILSIILGIACGDSRKPSSPRAIIRQSEKSSRTEDEFERNIKALIENLRSL
SKEEQGEEASPDLHQSMSRMSAHLEKIAIDSTNLDTYLTIFNSLFSIYQPMLIDSFIETL
PQALICVLADGQHCGWQADLTSIISSALNEQVLSVISSVKTEACMPTSNLRMADSTMAQL
SSLQEKLTNVLSSDLPFYVLSDNILALWNNFMDMAIPPVMSFMSDFMMSALQTPVDFLNL
GLQFGIEIPTLDQREKCQQGDLKQLIMWGMNHNVSWSFGQSLLDMFLAPETPLCSFPGPE
CQATGSIQFGRTGTPSVNIPTYSLTCEQQNLNQLNETLCATILGATSQKSYVLYQMCRAL
SMLSQTEVTKVWRNACHMTKNVILPLIEPCSDPGTAQSSRIARSTLSLSELLCDYQNWTI
AGAVDPALVTMCSENDRAAFILAVCNNAEAMQVLVRNPSNAWVWEFCANVSDTYIVNLYC
SYNMWTAETIDPSIVTFCWYNDMERFQFFMCDSVPFFMVVFSSEENNWLKPNCSQPPPQI
DINTHVAESCKYSEWKNVRAITPEQISECIQNDEVRFINEVCVNHTFVTELALNSANAWV
EKYCTYSIRNPPTSPPPLSIEVWCNYSKWTNMSVDPSVVALCWQYDQIGFHQNVCCNIPL
YDKLSLQADNQWLIRECSDNDTTNVLEQVCVYSDWSQPTIVDMTELALCADLDTENFTRN
VCANATVLQNLLANLDNTWLLEQCTNLTAPGPGGGAGNGGSLMGFRPAQQCQYSSWALVH
PDAALLALCWDYDQANFISFVCADSSILTHITREPSGLWVGTLCATYTPPQTTSVGGSNE
TTSQPCLIRDLAKKLNWTCSTDFSTVCQPGASQVQGLRVLLRCGIKILQPRLENLMTTQV
ASVVKRATSLWVVLLLALEESHMTSLRVTENIRLSVFDSIVIYMDNETNFDNKRVLLQCF
GKVLTSLMQTGRDVPTNFFLIKEYFRIPLFHLRSVLSAADSIIVREILVYYNRNYATLQL
TDDYLHTMVSVLFQIHLPRDISLFPDMGLLLALATPSDILSMPPLQNINALSIINFSIKN
LSLEQQQAFGRWFSRSISLPNMTAGSLSFIRDTGNLIAYLPFQSFQYLSPAQLLDGLDVL
MSNPLGLFKQQFIAQSLIGTFGNLTVDQIRRLGNLTCLTHPSQLMAYAGTEAFSVIQDNI
RTCAVQGFSVPSNMISSLILKSSDLQSPSSLTPQRVSELGPFLPLLGSSVLQQLSSAQLM
PALSTLASVPFTPAQARVIFDKISANFSLALPGSEHLSRLGSLVSGVKVETLWTLPTDVL
LEALPAMSLQTPGLTPPQVNTIISKLWGSSSVSQWMDKVKPLLSSTPLLSVIPQVPLLLI
RDTAVHTRLWNTQQAKVLFKEAVVSHPSLSLQEFLSLRTLATGVNCLDLRRLFQNLASLS
PLRDIMKFLRVQPVLLHPSLKKCVIEELYKFDFFSDLLGDLGSQIALSLPLSTIKKFPQD
KMDSLRKIIIQEPYYFLLLPSTKQAVLVDKMVQRLNMYTGLYTEEVFRSLGVMATFVTDE
MFWKLDRSFFVDGLEFLQRFCYNANKRDLVADMLREQRTFGPVKNWTSETLNQVDRFLFF
LPKDTIQLIPLALMSLERIERLFLSQQKWERGEFGSLCQKPSELFEKKQFVLQFFLGFLR
MGRAPYAGLIPTCESLHVTQPAAWTIDSLRNMPQAAFRRCLELIGQDPFFSAFELLMLLT
KTKEVYGMPSSFNSSVISQLGRIATQLSLEELASLRLSEIQSISAMGALNTWTRRQLKSL
FSTVLNSTRKTPSQLDSSTFVALGHIVCGIDAPVMRNLNPVEFSKAVLWLGRLNLSCSEE
QLQAFIGLLSHSLAFGPVSSWGSEVFIEIGAIAAGLPDMAMSALVREQIEGITPLAISLI
PTGKFAVVFNQAQIRMFTYDQAVAVTEAQRSALSPVQRTALSMVLNPWEDKPVDFRGTFT
PDRSLGVAMHPCPFFYLSSILIMLLFSLG
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atgcaccacggaggacgtttgatgttgctcatactcagcatcattttagggattgcatgt
ggtgactccagaaagccctcatcacccagggccatcatcagacagagtgaaaagagctcc
aggactgaggatgaatttgagaggaacatcaaagcattgatagagaacctcagatccttg
tcaaaagaagaacaaggagaagaggcctcaccggatcttcatcagagcatgagcagaatg
tcagcacaccttgagaaaatcgcaattgacagtactaacctagatacttacttgacaata
ttcaacagtttattctctatataccagcccatgctgattgacagtttcattgaaactctt
cctcaggctttaatttgcgttttggcagacggacaacactgtggatggcaagcagattta
actagtatcatttcatctgcattgaatgaacaagtactttccgtgatctcttctgttaaa
actgaagcttgcatgccaacatctaatctgcgaatggcagactccactatggctcaatta
agctctcttcaggagaagttgacaaatgttttgtcctcagacctcccattttatgtgctg
tcagacaacattttagccttatggaataattttatggacatggcaattccacctgtgatg
tcattcatgtctgatttcatgatgagtgctcttcaaactccagtggattttctaaacctg
ggattacagttcggcattgagatccctaccctagaccagcgtgagaagtgtcaacaaggt
gatctcaaacagcttatcatgtggggcatgaatcataatgtaagctggtcttttggacag
tcacttctggatatgtttttggctcctgaaactcctctttgcagtttcccaggtccggaa
tgccaggccacaggcagcatccagtttggtcgtactggcacaccctcagtgaacattccc
acgtatagtctcacctgcgaacagcaaaacttgaaccaactcaacgaaaccctttgtgca
acaattttaggagcaacatctcaaaaatcgtatgtcctttatcagatgtgtagagcgctc
agcatgctctctcaaaccgaagtgacaaaggtctggaggaacgcatgtcacatgaccaag
aacgtcatcttacctctcattgagccctgcagtgatcctggcacagcacaatcaagtcgt
atcgcgcggtccactctcagcctcagcgaacttctctgcgactaccagaactggactatt
gctggcgctgtggacccagctctggtcacaatgtgcagtgaaaatgatcgtgccgcgttc
attcttgctgtgtgtaacaatgctgaagccatgcaagtgctggtcagaaatcctagtaat
gcttgggtgtgggaattctgtgcaaacgtgtcagacacgtacatagtgaatctgtattgt
tcatataacatgtggactgctgaaaccatcgacccatcaatagtgactttctgttggtat
aatgacatggagagatttcagttttttatgtgtgacagtgtacccttctttatggttgtg
ttctccagtgaagaaaacaactggctgaagcccaattgctctcaacctcctccacaaatc
gacatcaacacccatgtggctgagtcttgcaaatactccgaatggaagaacgtacgagca
atcacccctgaacagatctctgaatgtatccaaaatgatgaggttcgattcattaatgag
gtgtgtgttaatcacacgtttgtcactgaacttgcgctgaacagcgcaaatgcttgggta
gagaaatattgcacatattctatcaggaatccccctacaagcccaccaccgctgagcatt
gaagtttggtgtaactatagcaaatggactaacatgtctgtggacccgtctgtggtcgct
ctatgctggcagtatgaccagatcggcttccatcagaacgtctgctgcaacatacccttg
tatgacaagttgtctcttcaagctgataaccagtggctgattagagagtgctctgataat
gacaccacaaatgtgttggagcaagtttgcgtttattcagattggagccagcctactatt
gtagacatgactgaacttgctctctgtgcagatcttgacactgagaacttcactcggaat
gtatgtgccaatgctacggttctccagaatctgctggcaaatttagacaacacctggtta
ttggagcaatgcacaaacctgactgcgcctggcccaggtggtggggctgggaacggaggt
agcctgatgggtttccgaccagctcagcagtgtcagtactccagttgggctttggtgcac
ccagatgctgctctcctcgctctttgctgggactatgaccaggccaactttatctccttc
gtctgtgctgactcttccatcctcacccacatcactcgggagccctccggcctctgggtc
ggcactctctgtgccacatacacacctccccaaaccaccagtgttggtgggagcaacgaa
acaacttcccagccatgtctaattagggatttagctaagaagctaaactggacatgcagc
acagacttcagcactgtctgccaaccaggtgccagtcaagtccagggtcttcgggtgctg
ttgcgctgtgggataaagatcctccagcctcgcttggagaatctcatgactacacaggtg
gcatcggtggtcaagcgggccaccagcctgtgggtggttctgctgttggctctagaagaa
agccatatgacctctctgagggtgaccgagaatattcggcttagtgtgtttgactcaatt
gtcatctacatggacaatgagaccaactttgacaacaagcgtgtgcttttgcagtgcttt
gggaaagttctgaccagtctgatgcaaacaggaagagatgtgcccactaactttttcctg
ataaaggagtatttccgtattcctctatttcatttgagatcagtgctcagtgcagcagac
agcataatcgtgagggagatcctggtgtactataacaggaactatgccactttacagcta
acagatgattacctgcacaccatggtgtctgtgctcttccaaattcacttgcccagggat
attagcctgtttcctgacatgggtcttttgttggctctagctacaccttcagacatcttg
tcaatgcctccgctacaaaatatcaatgcgttaagcatcattaacttcagcattaaaaac
ctttccctggagcagcagcaagcatttggtcgatggttcagtcggtccattagcttgcct
aacatgacagccggcagcttatcctttatcagagacactggtaacctgatcgcctatctg
cccttccagagcttccagtacctctcacctgctcagctgctggatggtttggatgtcctg
atgagtaacccgttgggtctctttaagcagcagttcattgctcagagtctcattggaacc
ttcgggaacctcactgtcgaccagatcaggaggttaggtaatctgacctgtctgactcac
cccagccagctgatggcatatgcaggaacagaagccttctcagtgatccaggacaacatc
aggacgtgtgcggttcagggttttagtgttcctagcaatatgatttccagcttgatcttg
aaatcgtctgacctgcagtctccctccagcctcactcctcagagagtctctgagcttggc
ccttttctgcccctgctgggatccagtgtcctgcagcagctcagctcagcccagctcatg
cctgccctcagcaccctcgcatctgtgcctttcacccctgcacaggcacgtgttatcttc
gacaagatctcagccaactttagtctggctctaccaggctctgagcatttgtctaggctg
ggatctcttgtgagtggagtaaaggtggagactctgtggactttaccaactgatgttctg
ctggaagcgttacctgctatgagccttcagacacctgggctcacccccccacaggtcaac
actatcatctccaaactctggggttctagttctgtgtcccagtggatggataaagtcaaa
cctttgctctctagcactccactcctcagtgtgattccccaagtccctctgctgctgatc
agagacactgctgtacacactcgcctctggaacacacagcaggctaaagttctctttaaa
gaggctgtcgtctctcacccaagtctctcacttcaagaatttctatctttgaggacactg
gctacgggagtgaattgcttggaccttagaagattgttccagaacctggcatctctatcg
cctctacgtgacattatgaaatttctgagagtgcagcctgtgctactccacccctcactg
aaaaaatgtgtaattgaggaactgtacaagtttgacttcttctcagatttacttggagat
ttgggttctcagattgccctgtcacttccgctaagcaccattaagaaatttccacaagac
aagatggattctctgaggaaaattataatacaggagccatattacttcctactgcttccc
agcaccaaacaagctgtcctggtggacaagatggttcaaagactgaatatgtacactggc
ctgtacactgaagaggtgtttcgttcgctaggtgtcatggctacatttgtgacagatgaa
atgttttggaaattggataggagcttttttgttgatggtctggagttcctacaaagattc
tgctacaatgccaataaacgagacctggtggcagatatgctacgggaacagcggacattt
ggccctgtaaaaaactggacatcagagacactgaaccaagtggaccgcttcttgtttttt
ctcccgaaggacactattcagctcatccccttagctttgatgagcttagagcgcatcgag
aggctgttcctgagtcagcagaagtgggagagaggagagtttggctctctgtgtcagaaa
ccctcagagctgtttgagaagaagcagtttgtgcttcagttcttcctcggcttcctcaga
atgggacgtgccccttatgctggactgatccccacttgtgagagcctgcatgtgacacaa
cctgctgcctggactattgacagccttagaaacatgccacaagctgcatttcggaggtgc
ttggagctcattggccaggatccatttttcagtgcattcgagctgttaatgctccttaca
aaaaccaaagaggtgtatgggatgccttcctcttttaactcctctgtgatctctcagttg
ggtcgcattgccactcagctttcacttgaagaattggcctctcttagactctctgaaatt
cagtcaatttcagctatgggggctctcaacacatggaccagaagacagctgaaatcacta
ttctccacggttctgaactcaaccagaaagactcctagccagttggactccagcacattt
gtggcattggggcatattgtgtgtgggattgatgcaccagtcatgcgcaacctgaatcca
gtggagttcagtaaagcagttttgtggcttggccgtttgaatttgtcttgctctgaggag
cagctgcaggcatttatagggctgctcagtcatagcttggcatttggaccggtcagctcc
tggggatcagaggtcttcattgagattggagcgattgcagcgggtctgcctgacatggcc
atgtctgctttggtgagggaacagatagaaggaatcaccccacttgccatctctctcatc
ccaacaggcaaatttgcagtagtgtttaaccaggcacagattcgtatgttcacctatgat
caggccgttgctgtgactgaggcccagcgctccgctctgtctccagtacagcggacggcc
ctgtccatggtgctcaacccctgggaggacaaacctgttgatttcagaggtactttcact
ccagacaggtcactgggagttgcaatgcatccctgtcctttcttctacctctccagcatc
ctgataatgctgctgttttctctgggatga
DBGET
integrated database retrieval system