Onychostoma macrolepis: 131543604
Help
Entry
131543604 CDS
T09350
Name
(RefSeq) collagen alpha-1(XXV) chain isoform X1
KO
K24356
collagen type XXV alpha
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
omc00536
]
131543604
Glycosaminoglycan binding proteins [BR:
omc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
131543604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
131543604
NCBI-ProteinID:
XP_058637103
LinkDB
All DBs
Position
07:complement(12848343..13319753)
Genome browser
AA seq
605 aa
AA seq
DB search
MDSKFGETNYMYLPYIHRYTSSQTASLTASASCQLLSLNVRGGLQGPPGPKGDKGDQGDQ
GPRGLPGLPSLAALHSNQILTVKMVFPKINHGFLSADQQLIKRRLIKGDQGQTGPPGPPG
PPGPPGPRGPPGDTGKDGPRGVPGLPGDPGMPGEIGQMGPEGPPGQKGSIGPPGIPGIDG
MKGDRGERGEKGDMGDEGPKGDPGEKGDAGSSAAGIKGEPGEPGRGGQKGEPGLPGLPGL
PGIKGEPGFFGPQGEPGLPGLPGTKGERGEQGPPGKGERGETGPAGHKGEQGEPGAPGLK
GSKGDSGGKGDVGPTGSQGPPGEKGEQGTTEIIDYNGNIQEALQKITTITVTGPPGPPGP
IGPKGMKGDQGIPGLPGLDGERGHKGSKGDMGIPGISGEKGSVGLPGLQGVNGLKGDKGD
TGLPGPQGPSIIGPPGAPGPHGPPGPMGPHGFPGPKGEPGLHGLKGLRGEPGHKGDRGPL
GLPGASGLDGKPGPRGMDGPIGTPGPAGPKGDRGEKGDVGDPGPRGPYGLPGAAGTPGMD
GLPGLKGDKGNMGERGEKGFRGFKGEKGEPGQPGLDGLDAPCQLGPDGLPMPGCWQKGVT
PWLVA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggactcaaagtttggagaaacaaactacatgtatctaccgtatatacaccgatacaca
tcctctcagacagcgagtttgacagcatcagcctcctgtcagttactgagtctgaatgtc
cgcgggggattgcagggtccacctggtccaaagggtgacaagggggatcaaggcgaccag
ggaccaaggggacttcctggtctaccctctctggctgcattacacagcaatcaaatcctg
actgtgaagatggtcttccctaagataaatcatggctttctttctgctgatcagcaactc
attaaacgtcgactcattaagggtgaccagggccaaacagggcccccagggcctcctgga
cctccaggtcccccaggccccaggggacccccaggggacacaggaaaagatggtcctcgg
ggagtcccagggctccctggagaccctggaatgccaggggaaattggtcaaatgggacct
gagggccctccaggacagaagggttccattgggccacctggtattccaggtatcgatgga
atgaagggtgacagaggtgaacggggtgaaaagggagacatgggagacgaggggccaaaa
ggtgaccctggagagaagggtgatgctggatcctctgctgctggaatcaagggtgagcct
ggcgagccagggcgcggaggacaaaagggtgagccaggacttccagggctgcctggactc
cccgggattaagggtgaacctggattctttgggcctcaaggtgagcctgggcttccaggc
ctgccaggaactaagggagagagaggagaacaaggaccgcctggtaagggtgaacgtggt
gaaacaggtccagcaggacacaagggagagcagggggaaccaggagcaccaggcctgaaa
ggctcaaagggggattcaggaggcaaaggtgatgtaggcccaacaggatcacaagggcca
cctggggagaaaggtgaacagggtacaactgaaatcatagactacaatggaaacatccaa
gaggctcttcagaagataactactattacagttacgggtccccctgggcctcctggacca
attggaccaaaggggatgaagggtgatcagggtattcctggacttcctggcctggatggt
gaaaggggtcacaaaggttcaaagggggacatgggaatccctggaatatcaggagaaaag
ggatcagtgggtcttcctggattacagggtgtaaatggtctgaaaggagacaaaggagac
actggtttgcctggccctcagggaccctcgattattgggccccctggagcacctggtcca
catggaccacctggccccatgggtcctcatggattccctgggccaaagggggaacctggg
ttgcatggtctcaagggactgcgaggggaacctgggcataagggtgacagaggacccctt
ggtctccccggagcatctggcttggacggcaagccaggacccaggggtatggatggacca
attgggactcctggtccagcaggtccgaagggagatagaggtgagaagggtgatgttggt
gatcctggacccagagggccatatgggttacctggagctgctggaacacctggaatggat
gggttaccaggcttaaagggagacaagggcaacatgggggaaagaggagaaaagggtttc
cggggctttaagggtgaaaagggcgagccaggtcagcctggcctggatgggctggatgcc
ccgtgccaattgggtccagatggactcccaatgcctggatgttggcagaagggtgtcacg
ccttggctggtggcttga
DBGET
integrated database retrieval system
