Onychostoma macrolepis: 131544393
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Entry
131544393 CDS
T09350
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omc04131
]
131544393
Membrane trafficking [BR:
omc04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
131544393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_8
TPR_1
TPR_7
TPR_14
TPR_10
TPR_NPHP3
SH3_1
SH3_9
ARM_TT21_4th
GCIP_C
Motif
Other DBs
NCBI-GeneID:
131544393
NCBI-ProteinID:
XP_058638547
LinkDB
All DBs
Position
07:complement(16012091..16030598)
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AA seq
1312 aa
AA seq
DB search
MSAADRRNSSKTGNGLESGPDGIRTVRRELSTEYTHNEWDNVMESSSRDFKTSRGSIKGT
SGASDDNIPTVLAMQLAMVEGPDRLPADEGTQEVLCRKLCVLEADLSGVVTLISELSAHF
VSINSEERTIFITFKTLEEIWKFSTYHKMGFLGQCMENLLMNQEFWLISLDQHSGIEISI
KEETLNLMYKGFLMQEGSFFGCCTANQMFDSSTSGSDLYLEKGDIALFEPPFLGSGWTVL
SLADGARGTKPKPALEPVIPFHEWFLKSCPESILVGGGKDTSDLPFQIAVGVCETTEEYD
ADGPDELSFQAGERIIILGLLVACFERFMGKLERTGDIGLVKTNLVKTTSSFCESSDIFL
KDEDRQIATLDQEKIEEDTIALLKKICQSDVGTNYKLDKTHLTELNNLKQKVKHILSEVD
EFQRNDVSSVSIKQQMKKEADDTESSRETPRFSVCLEQDNTSSPDEHHALLSFLSSRDHQ
PEFLLLYRAYPEFLISHFKGHSDEEEIVAYLGVARELARKTRDSWAQSRICFLLGQLCAG
RSKFSQARVYFEEALNVPRDCFTDMFLLSAIYSNLAFVYLTQKNHERFFSFSERLSALLM
AVPDCLFGCEDPEVLKYLLKKAILAKNQPAEARACFLLAKLHLKLKDGMSAIPFIERLLI
LADEVPDACDETLSPVFLVLARLYSDQRQPRLAESCAKRASLQVGATVSHCLCSISLLLE
NASELYGVAVPTQVAPYLTCAAAVGPSSKEPVLGHIHALCLSWLFHIHSMPDRAVRYMST
VLNHSSMSSVGQSDTTAALLWLAWLYICNQQPGTALEVLDAVLSSLPEHCTTQLEGVVYN
MRAISYRHSADIRQAAESYRAAIEICEEFEDRRNWAIVLANFGFMCLQIKAKRLAEEYLT
QSVELFSELEDEEHELSFILVLLELGKHFVSQGNHESGKIYYEWALMSAMFIHHIDSQLQ
ATRHLCQLYEEVCLDEAQCIIYNEHQLNLLQQIGDKSLEGELLEKISQLYLNLATEKANR
AALDYTKRSLGIFIDLGKKRKEAHAWLKAGKIYHILQQTELVDLYVQVAQDMALSTGDTL
FTLEMLEAAGDVFFNSSQDREKAICFYRDRALPIAVKTSSVRSQLRLCNKLSELLLQLGQ
CSEAIEYAQTALDISTSLADDLNERVAFHRLATLYHCLGQFEMAEHHFLKALSLCPSPLQ
YDEEALYYVRVYKTLGDIVFYDVKDPFDAAGYYHLALAAAMDLGNKRSQLELCTQLATIY
HNCLMDRELSLFFYQRARAFANDLHIRRINLAPDYSFRTTAQYKNTITGTTR
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccgcggatcgtagaaactcgtccaaaaccgggaacggcttggagtccggtccg
gatggaattcggacggtacgcagagagctgtcgactgagtacacacacaatgaatgggat
aatgttatggagtcttcatccagagattttaagacctcaagaggaagcatcaaaggtact
tcaggagcttctgatgataatataccaacagttttggctatgcagctggctatggtggag
ggaccagaccgacttcctgccgatgagggcacacaggaagtgctttgcaggaaactttgt
gtgctggaagctgacctctcaggggtcgtgaccttaatctctgagttgtctgctcatttt
gtatccatcaatagtgaggaaaggactatatttatcacctttaaaacacttgaagaaata
tggaagttcagcacataccacaaaatgggcttcttgggtcagtgtatggaaaaccttctc
atgaaccaggagttctggttaatctcccttgatcagcattcaggaattgagatctcaatt
aaagaagagacactaaatctgatgtataaaggctttctaatgcaagaagggtctttcttt
ggatgctgcacagcaaatcagatgtttgatagctccacgtcaggtagcgacctttatctg
gagaagggggatatcgctttgtttgagcctccattcctaggatcagggtggacagtgctg
tcactcgcagatggggctagaggaaccaaaccaaaaccagctctggagccagtcattccc
tttcatgagtggtttctaaagtcctgcccagagagtatattagtgggtggtggaaaggac
acaagtgaccttcccttccagattgcagtaggggtctgtgagaccacagaagagtatgat
gccgacgggccagatgaactgagtttccaggctggtgaacggatcatcatcctgggcctc
ctggtagcctgttttgagaggtttatgggaaaattggagagaactggggatatcggactc
gtcaaaaccaacctggtcaaaacaaccagttcattttgtgaatcatctgacatattcttg
aaagacgaggacagacaaattgctaccttggatcaggagaaaatagaagaggacactatt
gctttattgaagaaaatatgccagtctgatgttggcacaaactacaaacttgacaagact
catctgacagaattaaacaacctaaaacagaaagtcaaacacattttgagtgaggtagat
gagtttcaaagaaatgatgtttcatcagtcagcatcaagcaacagatgaagaaagaagct
gatgatacagagtcgtcccgggaaaccccacgtttttctgtctgcttagagcaggacaac
accagcagtccagatgaacatcatgcactgctttcgttcttgagcagccgtgaccaccag
ccggagttcctgcttttgtacagggcttacccagaattcctcatctcacatttcaagggt
cactctgatgaagaggagatagtggcgtatttgggtgtagcccgagaactggcacgaaag
acgcgtgattcgtgggcgcagagtcgaatttgttttcttcttggacagctttgtgcaggg
aggtcaaagttctctcaagctcgggtttattttgaggaagccttgaatgtacccagggac
tgtttcacagacatgtttctgctctctgccatttactccaacttggcattcgtctaccta
acacagaagaaccatgaaagatttttcagtttttcagagcgcttgtctgctttgttgatg
gctgtccctgattgtttgtttggctgtgaggatcctgaggtattaaaatatttactaaaa
aaagccatcctggctaagaatcagcctgccgaggcacgggcctgcttccttctggcgaag
ctccacctgaagcttaaagacggcatgagtgcaatcccattcattgaacggcttttgatc
cttgctgatgaagttcctgacgcatgtgatgagacattgagcccagttttcctggtgtta
gcaagactctacagtgaccagagacagccacgtttggctgaaagctgtgcaaagcgagca
tcacttcaggtaggagccaccgtgtcacactgtctttgtagtatctcactattgttggaa
aatgcatcagagctgtatggagtggccgtcccaacacaagtggctccatacttgacctgt
gccgctgctgtagggccctccagcaaggagcctgtgctgggtcatatccacgccctgtgt
ttgtcctggctcttccatatccacagcatgcctgacagagctgttcgctacatgtccact
gtcctcaaccacagcagtatgtccagtgttggccagtcagacactactgcagctctgcta
tggttggcttggctgtacatctgcaaccagcaacccggcacagctctggaagtgctagac
gctgtgctgtcatcgcttcccgagcactgtactactcagttagaaggagtggtttacaac
atgcgggccatttcatacagacattcagcggacatccgacaggctgctgagagctaccgg
gctgcaattgagatatgcgaggagtttgaggatagacgtaactgggccatagtactggcc
aactttggattcatgtgtttgcaaatcaaggcaaaaagattggcagaggaatacctcact
cagtcggtggagctgttctctgagcttgaggacgaagagcatgaactcagttttatttta
gtgcttcttgagttggggaaacactttgtttcccaaggaaaccatgagagtgggaagata
tactacgaatgggccctgatgagtgccatgtttatccatcacattgatagccagctgcaa
gccacacgtcacctgtgtcagctatacgaagaggtgtgtctggatgaagcccagtgtatc
atctacaacgagcaccagctgaaccttcttcagcagataggagacaagagcttagaggga
gagttactggagaagatcagccagctgtacctgaacctggctaccgagaaagccaataga
gctgctttagattacaccaaacgaagcctgggcatcttcatcgacttgggcaaaaaacgc
aaggaggctcatgcctggttaaaggcgggaaagatttaccacatcctccaacagacagag
ctagtggacctctatgtgcaggtagcccaggacatggctttgagcacaggagacacactc
ttcaccctggagatgttggaggcagctggagatgtgttcttcaacagctcacaggacagg
gagaaagccatctgcttttacagggaccgagcccttcccatcgcggtgaagacgagcagt
gtgcgctctcagcttaggctgtgtaataagctttcagagctcctgctgcagctgggacag
tgttcagaggccattgagtacgctcaaactgcattagacattagcacaagtctggctgat
gatttaaatgagcgggtggcattccatcgactcgccacattgtaccattgtctgggtcag
tttgaaatggcagagcaccactttctgaaagccctgtccctgtgcccctcacccctgcag
tacgatgaggaagccctgtactatgtcagggtttacaaaacacttggagacatcgtcttc
tatgatgtaaaggacccatttgatgctgctggctattatcacctggccttggctgctgct
atggatctgggcaacaagaggtctcagctagagctgtgcactcaattggccaccatctat
cacaactgtctcatggaccgtgaactctcgctgtttttctaccagcgagcgagagctttc
gctaacgatctccatattcgccgtatcaacctggcaccagactacagcttcaggaccaca
gcccagtacaaaaacacaataactgggacaacaagatag
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