Oryzias melastigma (Indian medaka): 112139352 Help Entry 112139352         CDS       T07439                                  Symbol thoc2 Name (RefSeq) THO complex subunit 2 isoform X1   KO K12879   THO complex subunit 2 Organism oml  Oryzias melastigma (Indian medaka) Pathway oml03013   Nucleocytoplasmic transport oml03040   Spliceosome Brite KEGG Orthology (KO) [BR:oml00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     112139352 (thoc2)   09122 Translation    03013 Nucleocytoplasmic transport     112139352 (thoc2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:oml03019]     112139352 (thoc2)    03041 Spliceosome [BR:oml03041]     112139352 (thoc2) Messenger RNA biogenesis [BR:oml03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      112139352 (thoc2) Spliceosome [BR:oml03041]  Complex C   Other components    EJC/TREX     112139352 (thoc2)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     112139352 (thoc2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  112139352 NCBI-ProteinID:  XP_024117875 Ensembl:  ENSOMEG00000004006 LinkDB All DBs Position LG14:11963529..11985905 Genome browser AA seq 1630 aa AA seqDB search MIMNKTSGRCVWKMATLIIPGEWIRNWEKSGKHEFMQLCKDLTEKSDHGSQKLQTALYEL CSNVIQGNLKLDLVTSVLGDMMDLREDMPSILADVFSILDLETGSLEEKNKRDHYTQLVG SCLSLIPEAILKERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGY AKLITELGQDLSGNVTSHLVLENIKSLIGCFNLDPNRVLDIILEVYESRSDQDEFFLSLI KSYMCEPLTLCHILGFKFKFYQEPNEETPKSLYHIAAALLHHNLIELEDLYVHLMPLDAT IIEEHKREISEAKQIARKLVMVVLPSDKSEDREKEKEKEEEKLEKPPDNQKLGLLEALLK IGDWQHAQSIMDQMPSFSSASHKTIALALCQLVHLTVEPLYRRVGVPKGARGCAMHALRN SRAPRPAESFEDLRKDTFSMLSYLGPHLSHDPILFAKIVRLGKAFMKEYQSDGRPEVKDK MEILLSCFLSIADQVLLPSLSLMECNACMSEELWGLFKLFPYHHRYRLYGQWKNETYSSH PLLVKVKAQTVERAKYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIV PVVDSLKYLTSLNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPI ELGGLLQYVTNQLKAGKSFDLLILKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGY FGQIRNTKKSSQRLKDALLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHD TLVQFGGFLASNLSTEDYIKRVPSIDVLCNQFHTPHDAAFFLSRPMYAHQILSKYDELKK AEKGNRQQQKVHKYMSACEQVMTPVHEAVVSLHPPRVWDDLRPQFYATFWSLTMYDLAVP HSAYDREVNKLKVQIKAIEDNSEIPLNKKKKEKERCTALQEKLQEEEKKQMDHVQRVLHR LKLEKDNWLLAKSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLL CYDRVFSAIIYTVASCTENESHRYGRFLCCMLETVTRWHSNRATYEKECVNYPGFLTIFR ATGFDGGNKADQLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYP KVLNLGQALECRVHKICLEEKDKRPDLYALAMGYSGRLKSQKVHMVPENEFHHKDQQARS ATPASQQNGPGSAGKPAASSIKTEEGPMEDGDRGKDKSQGIVKPVNKANNAAAKVATSNG NGAVNSTKAVKERDEKEKSGKEKKEKKEKALGSTPENKAENRREKQRDERLGKEERVARE GKEKTPKTDREKVKPEEKINKDDKVKAGNGDATELSRERDVIKESKSKEKGDRSAAAATL KSPTPRSDSVESERDHKRRKIDSHSSPSHSSSAKPSSRRSEVKRGVCCRSGQPRLPSPPH PLLPTLYCCLTTSSQIPTPSQLICHLHSSLQDNSNEPKESAPKHHINFNSVDRSKSRERE TEKKETENAQGRPKEKKEEKERKDRKRDHIINDHEMNLESKRRKEENDSSKNGKSTSPTC DSPLSVEKEKSKRSKSSSKEKAESMKPERTSSGGKKESRHDKDKSEKKEKRDSSGGKEDK KHHKSCDKHR NT seq 4893 nt NT seq  +upstreamnt  +downstreamnt atgattatgaacaagacatccgggcggtgtgtatggaagatggcgacacttattatccct ggtgaatggatcagaaactgggagaagtctggaaaacatgagttcatgcaactctgcaaa gaccttacagagaaaagtgatcatggaagtcaaaaattacagactgccctatatgagctc tgctcgaacgtcatacagggaaacttgaaattggatcttgtcaccagcgtcctcggggac atgatggacctcagagaagatatgccatccattttagcagatgttttcagtatattagat ttagagactggttctctagaagagaaaaacaaacgagaccattacactcagttggtggga tcgtgtttgagtctgatacctgaagccatcttgaaggagagactggatcccgagacacta gaatctctgggattgattaaacaagctcatcagtttaatcagaagattgtaaaaatcaag actaaacttttttacaagcaacagaagttcaacttgctacgagaggagaacgaaggttac gctaaattaataactgagctcggccaagacctgtcaggcaacgtcaccagccacctcgtc ctggagaacatcaagtctctcataggctgtttcaacttggaccctaaccgggttttggac atcatccttgaggtttatgagagtcgctcagatcaagacgagtttttcttgtcgctcatt aagtcctacatgtgtgagccactcacactctgccacattttgggcttcaagtttaaattc taccaggagcccaatgaggaaaccccaaagtcactttaccacattgctgctgcactgctc caccacaatctaatagagttggaagacctttatgtacatctgatgccattagatgccact attattgaagaacacaagcgggaaatctcagaggccaagcagatcgctcggaaactggtg atggtggtgcttccctcagacaaaagtgaagacagagagaaggagaaagagaaagaagag gagaaactggaaaagccacctgataatcaaaagcttggtctcctggaggcactacttaaa attggagactggcaacacgcccagagtattatggaccagatgccctccttttcttctgct tctcacaaaaccatcgcactggcactctgccagctcgtccacctaactgtggagcctctt taccgaagggttggcgtccccaaaggggcgcgggggtgtgccatgcacgctctgaggaac agtcgggctccccggccggcagagagttttgaagatctgcgcaaggacacgttcagcatg ctctcctacttgggcccccacctctctcatgaccccatcctgtttgcaaagatcgtgcgc ctgggaaaggctttcatgaaggagtaccaaagtgatggcagacctgaggtcaaagacaag atggaaatattgctgagttgtttcctgagcattgcagaccaggtgctgctgccctccctc tctttgatggagtgcaatgcttgtatgtcagaggaactctggggtctcttcaagctcttt ccctatcatcacaggtaccggctgtacgggcagtggaagaatgagacgtattccagccat ccgctgttggtaaaagtcaaagctcagactgtggaaagagcaaagtatattatgaagcgt ttgaccaaagagaatgtgaaacaatctggaaggcagattggcaaactgagccacagcaat cccaccatcctgtttgattatatgttgtctcaaattcaatggtacgacaacctcatcgtt cctgtggtggattccttgaaatacctcacatccctcaactatgatgtgctggcctattgc atcatcgaggccctggccaatccagagaaggagaagatgaagcatgacgacactaccatc tcctcgtggctccagagtctggcaagtctgtgtggagccgtgttcagaaaatacccaatt gagttggggggtctccttcagtatgtcaccaaccagctgaaagcagggaagagctttgac ctcctgattctgaaggaagttgtgcagaagatggccggcattgagattacagatgagatg acctcagaacagttagaggccatgacaggaggagaacagctcaaagcagaggggggttac tttggtcagatcagaaacaccaaaaagtcttcacagcgtctgaaggatgcacttctggac cacgaactggctcttccactgtgtttgctcatggctcagcaacgaaacggtgttgttttc ttagaggggggagagaaacaccttaaacttgtaggacatctttatgatcagtgccatgac acactggtgcagtttggtggctttttggcgtcgaacctcagcacagaggattacatcaaa cgagttccctccatcgatgttctctgtaaccagtttcacactcctcatgacgccgccttc tttctttctcggccaatgtacgcccatcagattttgtccaagtacgacgagttgaagaaa gcagaaaaagggaaccggcagcagcagaaggtgcacaaatacatgtcagcctgtgagcag gtcatgacaccggtgcatgaggcggtggtttccctgcaccctccccgggtctgggatgat ctccgccctcagttctatgccacattctggtctctcaccatgtacgacttggccgtgccg cattctgcctacgaccgggaggtcaacaagctcaaagttcagattaaagccatcgaggat aactctgagattcccctaaataagaaaaagaaggagaaggagcgctgcacagctctgcag gaaaaactacaggaagaggagaagaagcagatggatcacgtccaaagagttctgcaccgc ctcaaactggagaaagacaactggttgttagcaaaatccacaaagaacgagaccatcact aagttcctgcagctttgtctgttccctcgctgcatcttctcttccattgacgccgtgtac tgtgcccgctttgtggagctggtccaccagcagaagacccccaacttttgtactcttctt tgttatgacagagttttctctgccatcatttacactgtggccagctgtacagagaacgag tcgcatcgttacggacgcttcctctgctgcatgttggagacggtgacaaggtggcacagc aatcgcgccacatatgagaaggagtgtgtcaactaccctggcttcctgaccatcttcaga gctacaggctttgatggggggaacaaagcggaccagctggattacgagaacttcaggcat gtggtgcacaagtggcactacatgctgactaaagcttccgttcactgcctggagaccgga gattacacccacatccggaacattctgatagttctcaccaagatcctgccctgctaccca aaagtcctgaacctcggccaagcgctggagtgccgggtccacaagatctgcctcgaggag aaggataagagaccagacctctatgccttagcaatgggttattcaggtcggttgaaaagc cagaaggtacacatggttcctgaaaatgagtttcaccacaaggatcagcaagcccgcagt gccacgcctgcaagccagcagaatggtcctggcagcgccgggaaacctgccgccagctcc atcaagaccgaggaggggccgatggaggacggtgatcgggggaaagataaatctcagggg attgtaaagccagtgaacaaagccaacaatgcagcagctaaagtggccaccagcaacggg aacggtgctgtcaacagcaccaaagccgtcaaagagcgggacgagaaagaaaagagtggg aaggagaagaaagaaaagaaagaaaaggcattaggcagcactccagaaaacaaggcggag aaccgcagagagaagcagagagacgaaaggttaggcaaggaggagcgagtggctcgcgag ggtaaggagaagacccccaagacagaccgggagaaagtgaagccagaagagaagatcaac aaagacgacaaggtcaaagctggaaacggggacgccacggagctgtccagggagcgagac gtcatcaaggagtccaagagcaaggagaaaggagacaggagcgctgcagctgcaaccctc aagtcaccaactcccagatctgactctgttgaatctgagcgggatcataaaagacgaaag atcgacagccactcttccccatcccactcttcatctgctaagcctagctctcgaaggtca gaggtcaagagaggagtatgctgtcggtccggccagcctcgactcccctctcccccacac ccccttcttccaactctctactgctgtctgacaacctcctcccaaatccccaccccctcc cagctcatctgtcatctccattcatccttacaggacaatagcaacgaacccaaggagtcc gcacccaagcaccacatcaactttaattcagttgaccggtccaagagcagagagagggaa acggagaagaaagaaacagagaacgctcaaggccgacccaaagagaagaaagaagaaaaa gagcggaaggacaggaaaagagatcacatcatcaacgatcatgagatgaacctggaatcc aaacgcaggaaggaggagaacgattcctccaaaaacggcaaaagcacaagtcctacctgc gactcgccgctgtcagtggaaaaagagaagagcaaacgatccaagtcgtccagcaaagag aaggcagaatccatgaaacccgagcggacgtcctccggaggcaaaaaggagtccagacac gacaaagacaagtctgaaaagaaagagaagagggacagcagtggaggaaaggaagacaaa aagcatcataaatcctgtgacaagcacagataa

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