Oryzias melastigma (Indian medaka): 112140280
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Entry
112140280 CDS
T07439
Symbol
cars1
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112140280 (cars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oml01007
]
112140280 (cars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oml03016
]
112140280 (cars1)
Enzymes [BR:
oml01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
112140280 (cars1)
Amino acid related enzymes [BR:
oml01007
]
Aminoacyl-tRNA synthetase
Class I (G)
112140280 (cars1)
Transfer RNA biogenesis [BR:
oml03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112140280 (cars1)
Prokaryotic type
112140280 (cars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
Arc1p_N_like
tRNA-synt_1
Motif
Other DBs
NCBI-GeneID:
112140280
NCBI-ProteinID:
XP_024118945
Ensembl:
ENSOMEG00000016785
UniProt:
A0A3B3CBB2
LinkDB
All DBs
Position
LG3:complement(9474426..9501648)
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AA seq
824 aa
AA seq
DB search
MSSSGDTAFEFGFLLQIREEAALAAALNDYLSCRSYLAGFSPSQADLKAFRLLRRPPEPQ
HVHALRWYRHIQLQPELSAGADADSSTKGKRLQPSWSPPAGGDVPQLRLYNSLTRAKEPF
FPQKGNKVTWYCCGPTVYDASHMGHARSYISFDILRRILRDYFKYDVFYCMNITDIDDKI
IKRARQNHLLEQYQKKKPAAAQILQDVLSARGPFQEKLASTTDPDKKQMLERLDAAVTSA
LQPLQAAVEHRAADGELQPLAQALLENSKDLLAEWLDQQFGSQVTDNSIFSSLPNYWEGE
YHKDMEALNVLPPDVLTRVSEYVPEIVEFVKTIVSNGYGYESNGSVYFDTAKFEASPQHS
YAKLVPEAVGDQKALQEGEGDLSISADRLTEKKSQNDFALWKASKPGEPSWDSPWGKGRP
GWHIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSEAYFENDHWVRYFLHTGHLTI
AGCKMSKSLKNFITIKEALAKNSARQLRLAFLMHSWKDTLDYSSNTMESAIQYEKFMNEF
FLNVKDILRAPTDLTGRFEKWEAAEVELNNSFCSRKSAVHQALCDNVDTRSAMEEMRVLV
SHSNSYIAGRKAAKLRPNRTLLESIAAYLTNMLRIFGAIEGSETIGFPVGGQAQSVDLES
AVMPYLSVLSDFREKVRKIAREQKVTELLQLCDIVRDDTLPELGVRLEDHEGLPTVVKLV
DRETLLKEKEEKKKMEEEKKRKKEEAARKKQEQEMAKLAKMKIPPCDMFRSETDKYSQFD
ETGFPTHDAEGKELSKGQAKKLRKLYEAQEKLHSEYLQRNQNGD
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagctcaggagacacagcttttgaatttggcttcttgctgcagatcagggaggaa
gctgcgctggcagcggccctgaatgactacctcagctgtcgcagctacctggctggcttc
agcccctcccaggcagacctgaaagcctttaggctcctccgcaggccccccgagccgcag
catgtccacgctctgcgctggtacagacacattcagctgcagccggagctgagcgcaggc
gcagacgcagacagcagcaccaaagggaagcggcttcagccctcatggtctccaccagca
gggggcgatgttccccagcttcgcctctacaacagcctgaccagagctaaggagccgttc
tttcctcagaaagggaacaaagtgacgtggtactgctgtggacccacagtgtacgacgcc
tcacacatgggacacgccaggtcctacatttcattcgatatcctccggaggatcctgagg
gattacttcaagtatgatgtcttctactgcatgaacatcacagacatagatgataagatc
atcaaaagggcccggcagaaccacctactggaacagtaccagaagaagaaaccagctgca
gctcagatcctgcaggacgtcctcagtgccagagggccctttcaggaaaaactggcctcc
acgacagatccagataagaagcagatgctggagcggctggacgccgccgtgacctcggcc
ctgcagccgctgcaggcggccgtggagcacagagctgcagacggagagctgcagccgctg
gctcaggcattgctggagaactccaaggatctgctggccgagtggttagatcaacagttt
ggaagtcaggtcacggataattccatcttctccagccttcctaactactgggagggggag
tatcacaaagacatggaagctctaaacgttcttcctccggatgtcctcacgcgggtcagc
gaatacgtccctgagattgtggagtttgtgaagaccatcgtctccaacggttacgggtac
gagtccaacggttccgtttactttgacacggcgaagtttgaagccagtcctcagcactcg
tacgccaagctggttccagaggcggtgggggatcagaaagctttacaggaaggagaaggc
gacttgagcatctctgctgaccggctcactgagaagaagtctcagaacgactttgctctg
tggaaagcctccaaacccggtgaaccgtcctgggactctccgtggggaaaggggcggccg
gggtggcacatcgagtgctcggccatggccggatccattctgggggagtcgatggacatc
cacggcgggggttttgacctgcgcttccctcatcatgacaacgagctggctcagtctgag
gcttactttgagaacgaccactgggtgcgttacttcctgcacacaggtcacctgaccatc
gcaggctgcaagatgtccaagtctctgaagaacttcatcaccataaaggaggctttagcc
aagaactcagctcgtcagctccgtctggcttttttgatgcattcctggaaagacaccctg
gactactcctccaacacgatggagtcggccatccagtacgagaagttcatgaacgagttc
ttcctgaatgtgaaggacatcctccgcgctccgaccgacctcacgggtcgcttcgagaag
tgggaggcagcggaggtggagctcaacaacagtttctgcagcaggaagtccgccgtccac
caggctctgtgcgataacgtggacacccgcagcgccatggaggagatgagggtgctggtc
agccacagcaacagctacatcgccggcaggaaggccgccaagctgaggcccaaccgcacg
ctgctggagagcatcgccgcctacctcaccaacatgctgaggattttcggtgctattgaa
ggatctgaaaccatcgggtttcctgttggaggacaagctcagagtgttgatctggaaagc
gcggtgatgccatacctcagcgttctgtctgacttcagagagaaggtccgaaaaatcgcc
cgagagcagaaagtaacggagctgctgcagctctgcgacatcgtccgcgacgacacgcta
ccagaactgggggtccggctggaggatcatgagggtctccccactgtagtgaagctggtg
gacagagagacattactgaaagagaaggaggagaagaaaaagatggaagaagaaaagaaa
agaaaaaaagaagaagctgcccggaaaaaacaggagcaggagatggctaaactggctaag
atgaagatccctccatgtgacatgttccgctctgaaaccgacaaatactctcaatttgat
gaaactggttttcccactcatgatgctgaagggaaagagctgagcaaaggacaagccaaa
aagctgcggaagctctacgaggctcaggaaaagctgcacagcgagtatcttcagaggaac
cagaacggcgactga
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