Oryzias melastigma (Indian medaka): 112141681
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Entry
112141681 CDS
T07439
Symbol
cacna1ab
Name
(RefSeq) calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b isoform X1
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04010
MAPK signaling pathway
oml04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112141681 (cacna1ab)
04020 Calcium signaling pathway
112141681 (cacna1ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112141681 (cacna1ab)
Ion channels [BR:
oml04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
112141681 (cacna1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
112141681
NCBI-ProteinID:
XP_036066702
Ensembl:
ENSOMEG00000019550
LinkDB
All DBs
Position
Unknown
AA seq
2419 aa
AA seq
DB search
MARFGDEVPNRYGGGGGGGSGGGGAGGQGGPGRGGSRQGGPPGAQRVYKQSMAQRARTMA
LYNPIPVRQSCLTVNRSLFLFSEDNVVRKYAKKITEWPPFEWMILTTIIANCIVLALEQH
LPDGDKTPLSERLEETEPYFIAIFCFESGIKILALGFALHKGSYLRNGWNVMDFVVVLTG
ILSSVGSQLDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFVAILMF
AIIGLEFYMGKFHKTCYDDITRDEVDKRPCGEKLPSRLCPNGTSCLGGWLGPNFGITQFD
NILFAVLTVFQCITMEGWTDMLYFSNDVEGSAWNWMYYIPLIIIGSFFMLNLVLGVLSGE
FAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVILAEEDKTGNFDGSKRRPTI
KTRNNKTELLNQEEGEDNMGDAVGFARSSIKSGKDGSNYSKKERRMRFFIRKMVKTQAFY
WTVLCLVGLNTICVAVVHYDQPELLSDFLFYAEFIFLGLFMTEMLIKMYGLGIQPYFHSS
FNCFDCVVIVGSIFEVVWATIKPGTSFGISVLRALRLLRIFKVTKYWAPLRNLVVSLLNS
MKSIVSLLFLLFLFIVVFALLGMQLFGGQFNFEEGTPPTNFDTFAAAIMTVFQILTGEDW
NVVMYDGIKSQGGVNDKGMIFSIFFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEE
QEEAANQKTALQKAKEVAEVSPLSAANLSIAAKEQQKNHTKANKSVWEQRTSEIRRQNLM
TSREALYNELEQDDWKVEGEGEEVSYPRKARGDMKTHLDRPLVVNPQDNRNNNTNKTQPG
ELPLDLQYRHQDMEHCRRGNRHHHFHHHRHQKAAIADSGEMCTLMETRMEHGFSCTSLGN
VEGSARGPERCRNRERKQARSASPHRSEGGEGSEPRRSKQHHGRTKDGEPCRRHRSRGTG
GDGGKGEEEGKKTRRHRHGNHDRSRGHRSRKEHHSAGPSLSTTRPIQQYNEDLDNFRNNS
KLASAHGHLYALPPDHPHHVNNLLNCSDADTQTLLHSMDSLILTSMAKCDYTTIDMPPVY
PYPSTNAILQVNKNANTDQKKSEEKKEEEDEGGDEDGPKPMPPFSSCFILSTTNPFRRCC
HYILTLKYFEFSILSVIAMSSIALAAEDPVNPNSPQNDVLRYFDYVFTGVFTFEMLIKMV
VLGLFLHEGSYFRDLWNILDFIVVSGALVAFAFTPSSTRGSSKGKDISTIKSLRVLRVLR
PLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGRFFYCTDESKE
FERDCRGEYLVYDKDEVKAEKREWKKYEFHYDNVAWALLTLFTVSTGEGWPQVLKHSVDS
TNENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEDYSLEKNER
ACIDFAINARPLTRHMPKNKLSFQYRMWHFVVSPPFEYSIMALIALNTIVLMMKFEGASG
TYDNVLKYLNIVFTIFFFMESVLKIIAFGPLNYFRDAWNVFDFVSVIGSITDILVTEFWN
NFINLSFLRLFRAARLIKLLRQGETIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ
LFGNIALDEEEESAISEHNNFRTFIMALMLLFRSATGEAWHEIMLACLGEQKCDPDSGNE
GKKECGSTFAYTYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRIWA
EYDPAACGRITYTDMYQMLRHMCPPLGLGKRCPARVAYKRLLRMDLPVADDNTVHFNSTL
MALIRTALDIKIAKGGADKHQMDAELRKEMMAIWPNLSQKTLDLLVTPHKAATDLTVGKI
YAAMMIMEYYRQSKTKKLQALREEQECFGEWRNRTPLMFQRMEPPSEGGGTDGQGGQIQN
SLPSTQPDVNSIPTEGGMTENQSWVTEKAQEMFQKTGNWSPDRPYPDDLHENRHNPQTVE
MREMGRDGYSDTEPYHPVDGHGRTLSMPRLSADNQRAYAGSRRRHRPRGNNLSTITDTSP
MRRSTSSLVHGRSGRGVRLDDYSLERVVSEEGRHGGGRRHRDRSHRTSQRSLTRYTDADT
GLGTDLSTTTQSGELPPKERERDRGRTKDRRHHHHHHHHHSSMDKERYGPERHDYAHRHP
HDRHWSRSPSEGPDGRGHRQGSSSVSGSPVPSTSGTSTPRRGRRQLPQTPAVPRPHVTYS
PAVRKPSYGPPGQGRLRSPSPRHFSPPDHDRGYHHRPSSRHGSPHHVGSSSRHGSPRSPR
RQSPRSPLHGSPRSPHRSRWSGPPPGDSLEGDGPFYERDYEYERHHEPPAYEQSLSHGNP
HPHGGNPHPHPRSPRTARHGPLPPPHPHPRRVPNGYRSSSPSPQRRGPPGAPHHRPPHGR
GPRKGLHEPYSETDEDDWC
NT seq
7260 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgttttggagacgaggtgcccaacaggtatggaggaggaggaggtggtggcagt
ggtggcgggggtgccggcggacaaggggggcccggccgcggtggcagcaggcaaggtggg
ccccccggagcacagcgggtgtacaagcagtcgatggcccagagagctcggaccatggcc
ctgtacaaccctatacccgtccggcagagctgcctaacggtcaaccgctccctcttcctc
ttcagcgaagacaacgtggtgaggaagtacgccaaaaagatcaccgaatggcctccgttt
gaatggatgatcctcaccaccatcattgcaaactgcatcgtactggctttggagcagcac
cttcccgatggagacaagacgcctctgtctgaacgactggaggagacggagccttacttc
atagccatcttctgtttcgagtctgggataaagatcctggctctgggttttgcgttacat
aagggctcctacctgaggaacggctggaacgtcatggactttgtggtcgtactcactggg
atcttgtcatctgtggggtctcagcttgatctgaggacactacgagccgtcagagtgttg
cggcctctaaaactggtgtctggaatccccagcctgcaggtggtgctcaagtctattatg
aaggccatgatccccctgctgcagattggactgctgttgtttgtggctatcctcatgttt
gccatcatcggccttgagttctacatgggaaaattccacaaaacctgctatgatgacatt
acaagggatgaagtggataaacgaccatgtggggaaaagctgccgtcccgtttgtgccct
aacggcacctcatgtcttggcggctggcttgggccaaacttcggcatcacgcaatttgac
aacatcctgtttgcagttcttaccgtcttccagtgcatcaccatggaaggatggacagac
atgctctacttcagcaacgacgtggagggcagcgcctggaactggatgtactacatccct
ctcatcatcattggctccttcttcatgctcaacctggtgctgggtgtcctctcaggtgaa
tttgccaaagagagagagcgagtggaaaacaggagcgagttcctgaagctgaggcgacag
cagcagattgagcgagagctcaacggatacctcgagtggatctgcaaagcagaggaggtg
attctggctgaggaggataaaaccggaaactttgatgggtcgaagcgacggccaaccatc
aaaaccaggaacaacaagacggagctgctgaaccaggaggaaggagaggacaacatggga
gatgcagtgggttttgctcgttccagtataaagagcgggaaggacggctccaattacagt
aaaaaggaacgacggatgaggttctttatccgaaagatggtgaaaacacaggccttctat
tggacggtgctctgcctggtgggcctcaacaccatctgcgtggctgtggtgcattacgac
cagcctgaactgctctctgacttcctcttctatgcagagttcatcttccttggcttgttc
atgactgagatgctgatcaagatgtatggtctgggcatccagccttacttccactcatca
ttcaactgttttgactgtgtggtaattgtgggtagtatctttgaggtggtgtgggcgacc
ataaaaccaggtacatcattcggcatcagcgtactgcgagctctgaggctgctgcgcatc
ttcaaagtcacaaagtactgggctcctctccgaaacctggtggtttctctgctgaactcc
atgaaatccattgtcagtttgcttttcctcctcttcctcttcatcgtggtctttgccttg
ttggggatgcagctgtttggtggacaatttaactttgaagagggaactccgccgactaac
tttgatacttttgcagcagccattatgacagtgtttcagatcctgacaggtgaagactgg
aatgtcgtcatgtatgacggcatcaagtcccagggaggagtgaatgacaaaggaatgatc
ttctccatcttcttcattgtcctcacgctctttggcaactacactctgctcaatgtcttt
ttggccatcgctgtcgacaatctggccaacgcccaggaacttaccaaggatgaggaagaa
caggaagaagcggccaatcagaaaacagctctgcagaaggctaaggaggtggcagaggtc
agcccactgtctgctgccaacctttctattgcagccaaggagcagcagaagaaccacact
aaagccaacaagtccgtctgggagcaaagaacaagtgagattcggcgacagaatctgatg
acgagtcgtgaggcgctctacaacgagctggagcaggacgactggaaggtggaaggggag
ggagaggaggtgtcctatccacgaaaagcacggggtgacatgaaaacccacctggacaga
ccgctggtagtgaacccacaggataatcgaaacaacaacaccaacaagactcaacccggc
gagctgcctctggacttgcagtaccggcaccaagacatggagcactgtcgccggggcaac
cgccatcatcacttccaccaccatcgccaccagaaagcggccatagcagacagtggagag
atgtgcacgctgatggagacccgcatggagcatggcttcagctgcacgtctctgggtaac
gtggaggggagcgcgagggggccagagcgctgcaggaacagggaacggaagcaggcgcgc
agcgcttccccccaccgcagtgaaggcggagaggggagcgagcccaggaggtccaagcag
caccacggtcgaaccaaagatggggaaccgtgcagacgacacagatctcgaggaacaggg
ggggacggggggaaaggagaggaagaaggcaaaaagacgaggcggcatcgacatggcaac
catgacagaagtagaggccaccgaagcagaaaggagcaccacagtgccgggcccagcctg
tccaccacacgacccatccagcagtacaacgaggaccttgacaacttccgcaacaacagc
aagctggcgagtgcccacgggcacctttatgccctcccacctgaccaccctcaccacgtc
aacaacctgctcaactgcagcgacgctgacacccaaacgctgctgcacagcatggacagc
cttatcctaaccagcatggccaagtgcgactacacaaccatcgacatgccccctgtctat
ccctacccctccaccaatgccatcttgcaggtgaacaagaacgctaacactgaccagaaa
aagagtgaggagaaaaaggaggaggaggatgaaggtggagatgaagacggccccaaaccc
atgcctcccttcagttcctgcttcatactgtccaccacaaacccgtttcggaggtgctgt
cactacatcctgactctgaagtattttgagttcagcatcctgtctgtcatcgctatgagc
agcatcgccctcgctgcagaagaccctgtcaaccctaactcaccacaaaacgatgtgctg
cgttattttgactacgtttttacaggcgtcttcacatttgaaatgttgatcaagatggtg
gttctaggcttgtttctccatgaaggatcctacttccgcgacttgtggaacattctggac
tttattgtggttagtggtgctctggtggccttcgccttcacgccgagcagcacccggggg
agcagcaaaggcaaagacatcagtacaatcaaatccctgcgggtgctcagagtgctgcgt
ccactaaagactattaagcgcctgcccaaattaaaggctgtctttgactgtgtggtcaac
tccctgaagaacgtcctgaacatcctgattgtctacatgctcttcatgttcatctttgct
gtggtggctgtgcagctcttcaaaggtcgcttcttctactgcactgatgaatccaaagag
tttgagcgcgactgcaggggcgagtacttggtttatgacaaagatgaggttaaggctgag
aagcgggaatggaagaagtacgagtttcactacgacaacgtggcttgggccttgctcacc
ctcttcacggtctcaactggagaggggtggccacaggtgttaaagcactcagtggactcc
acaaatgagaatcagggcccgagcccgggttataggatggaaatgtccatcttttacgtg
gtgtacttcgttgtcttccctttcttctttgtaaacatcttcgtggctctgatcatcatc
accttccaggaacagggggataagatgatggaggactacagcttagaaaagaatgaaaga
gcctgtatagattttgcaataaatgccaggcccctgacacgccatatgccaaagaacaag
ctcagcttccagtatcgtatgtggcattttgtagtgtctccgcccttcgagtacagcatc
atggctctgattgcactcaacaccatcgttctcatgatgaagtttgaaggcgcatctgga
acatacgacaatgttctcaagtacctaaacatcgtattcaccatctttttctttatggag
tcggtcctaaagatcattgcttttgggcctctgaattacttcagagacgcctggaacgtt
tttgattttgtgtctgtcattgggagcattactgacatattagtaacagagttttggaac
aatttcatcaacctgagcttcctgaggctgttccgagcggcccgcctcatcaagctcttg
aggcagggcgagaccatccgcatcctcctctggacgtttgtccagtctttcaaggctcta
ccatacgtatgtctactcatcgccatgctgttcttcatctatgccatcatcggcatgcag
ttgtttggaaacatagctcttgacgaagaagaggagagcgccatcagtgagcacaacaac
ttcagaaccttcatcatggccctcatgctgctcttcaggagcgctacaggagaggcgtgg
catgagatcatgttggcttgcctcggagaacagaagtgcgatccagattcggggaatgaa
ggaaagaaggaatgcggcagcacctttgcctacacctactttgtctccttcatcttcctt
tgctcatttttgatgttgaatctttttgtggctgtcatcatggacaacttcgagtacctg
actagagactcatccatcctggggccgcatcatctagacgagtatgtaaggatttgggct
gagtacgaccccgccgcctgcggccggatcacttacacagacatgtatcagatgctaaga
cacatgtgtccgccgctaggcctcgggaagaggtgtcccgcccgggtcgcctataagaga
ctgctgcgtatggacctacctgttgccgacgacaacacggtgcattttaactccaccctt
atggctctgatccggacagctctggatataaaaattgccaagggcggtgcagacaagcac
cagatggatgcagagctaagaaaagagatgatggctatctggccaaatctgtcccagaag
acactggacctgctggttaccccacacaaggcagccacagacttgacagtgggcaaaatc
tacgctgccatgatgatcatggaatactacaggcagagcaagacgaaaaagctgcaggcc
ctgcgagaggaacaggagtgctttggagaatggaggaaccgaacgccattaatgtttcag
cgtatggagccgccctctgagggagggggcacggatggtcagggggggcagatccagaac
agcctccccagcacccagccagacgtcaacagcatacctactgagggcggcatgactgag
aatcagtcctgggtgacagaaaaagcccaggagatgttccaaaagactggaaactggagc
ccggaccgaccttatcccgatgaccttcacgaaaaccgccacaacccacagacggtagag
atgagggagatggggcgggacgggtactccgacactgagccctatcacccagtggatggg
catgggcggaccctctccatgccccgcctctcggcagacaaccaaagagcttatgctggt
tcgcggaggagacacaggcctcgtggaaataacctcagtaccatcaccgacaccagtccg
atgcggcgctccacgtccagcctggttcacggtcgttcaggacgtggcgtgagactggac
gactactcacttgagagggtggtttctgaggaggggaggcacggcggaggtcgcaggcat
agggacaggagtcatcgcacctcacagcgttccctgaccagatacaccgatgcagacacg
ggcttgggaacagacttgagcaccaccacacagtcaggagaactaccccccaaagagcga
gagcgggaccgcggccgcaccaaggatcgccgtcaccaccaccaccatcaccaccatcac
agttctatggacaaggagcgctacggtccagaacgccatgactacgcccacagacaccct
catgaccgccactggtcaaggtcacccagtgaagggcctgatggaagaggtcacagacag
ggcagtagttcagtgagcggtagtccagtcccctctacctcggggaccagcacaccacgg
aggggccgacgccaactgccgcagacccccgccgtcccacgtccgcatgttacctactcc
cctgctgttcgcaagcccagctatggcccccccgggcaaggtcgactgcggtctccctcc
ccccgccacttctccccaccggaccacgacaggggctaccaccaccggccctcatctcgc
cacggctctccacaccacgtcgggtcctcatcccggcacggctcgccccgctcaccccgg
cgtcagtccccgcgctcgcctctccatgggtcgccgaggtcccctcacaggagccgctgg
agtgggcccccgccgggcgacagcctcgagggtgatggaccgttctatgagagagattat
gagtacgagcggcaccacgagcctccagcttacgagcagagtctctcccatggcaaccct
cacccgcatggggggaatccccatccacacccacgctcaccgaggactgcccgtcacggg
ccccttccaccccctcacccgcatccgcgtagagtacccaatggataccgttcatcctca
ccttcccctcagcgacggggaccaccgggggcaccacaccatcggcctccccatggcaga
gggccccgcaagggtctgcatgaaccctatagtgagacggacgaggacgactggtgctag
DBGET
integrated database retrieval system
