Oryzias melastigma (Indian medaka): 112142853
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Entry
112142853 CDS
T07439
Symbol
siah2l
Name
(RefSeq) E3 ubiquitin-protein ligase Siah2 isoform X1
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112142853 (siah2l)
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112142853 (siah2l)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112142853 (siah2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
112142853
NCBI-ProteinID:
XP_024122234
Ensembl:
ENSOMEG00000013887
UniProt:
A0A3B3C3I0
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All DBs
Position
LG14:381273..392183
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AA seq
338 aa
AA seq
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MTEPPLRPLVGPGPQLGAMSGPSSAGAGGLGAAKAGGGKHGAASAAAAAAAAAAVAAAAG
VGSVAGSGSAASSAVLSLPAAGLPGQPTELTALFECPVCFDYVLPPILQCQSGHLVCNPC
RQKLSCCPTCRGPLSPSIRNLAMEKVASTLPFPCKYSSAGCLLSLHHSEKPDHEEVCEFR
PYTCPCPGATCKWHGSLEAVMPHLMHAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSC
FSHHFMLVLEKQEKYEGHQQFFAVVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIH
DGVAAAIMNSDCLVFDTSIAHLFADSGNLGINVTISMC
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacctccgcttcggccgctcgtcggaccgggaccgcagctgggagccatgagc
ggcccgtcctcagccggagccggaggactcggagccgcgaaagcaggcggggggaagcac
ggagccgcttcagccgccgccgctgctgccgccgccgcggccgtggcagccgccgccggt
gtgggctctgtggccggctcgggctcggctgcatcttccgccgtcttgtctctgcccgca
gccggcctcccgggacagcccacggagctcacggcgctgttcgagtgcccggtctgcttc
gactacgtgctgccgcccatcctgcagtgccagtcgggtcacctggtctgcaacccgtgc
cggcagaagctgagctgctgtccgacctgccgcggcccgctcagcccgagcatccggaac
ctggccatggagaaggtggcgtccacgctgccgttcccctgcaagtactcgtccgccgga
tgcctgctgtctctgcaccacagcgagaagcccgaccacgaggaggtgtgcgagttccgg
ccgtacacgtgtccgtgtccgggcgccacctgcaagtggcacggctcgctggaggccgtc
atgcctcacctgatgcacgcccacaagtccatcaccacgctgcagggagaagacatcgtc
ttcctggcgacggacatcaacctgccgggcgccgtggactgggtcatgatgcagtcgtgc
ttcagccatcacttcatgctggtcctggagaagcaggagaagtatgaaggccaccagcag
ttcttcgccgtcgtcctcctaatcggcacgcgcaagcaggccgagaacttcgcctaccgc
ctggagctcaacggcaaccggcgccggctcacctgggaggccacgccgcgctccatccac
gacggcgttgccgccgccatcatgaacagcgactgcctggtgttcgacacctccatcgct
cacctctttgcggacagcggcaacttgggcatcaacgtcaccatctccatgtgctga
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