KEGG   Oryzias melastigma (Indian medaka): 112142858
Entry
112142858         CDS       T07439                                 
Symbol
cdx1b
Name
(RefSeq) homeobox protein CDX-1b
  KO
K09312  homeobox protein CDX1/4
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oml03000]
    112142858 (cdx1b)
Transcription factors [BR:oml03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain ANTP: HOXL
    112142858 (cdx1b)
SSDB
Motif
Pfam: Caudal_act Homeodomain Homeobox_KN K_channel_TID
Other DBs
NCBI-GeneID: 112142858
NCBI-ProteinID: XP_024122242
Ensembl: ENSOMEG00000013729
LinkDB
Position
LG14:446573..453106
AA seq 283 aa
MYVSYLQLDKEPPMYAHQSPVSRHPGLSLSPQSFPVPPPQYSDFPSYHHHHPGLSVDPSQ
QAGPGPGGWSPAYPPPPAPTRDDWSSHHYTAGGPPGASAVTGPSLGFSPPDFPGQPPSLL
PPSLNATVGQLSPGSPRRRNPYDWIRTSAPPSNPNGKTRTKDKYRVVYTDHQRLELEKEF
HYSKYITIRRKAELATALSLSERQVKIWFQNRRAKERKINKKKLQQPASSTTTPTPPAGN
GGGTGGAGIHGNSSSSVAMVTSSSGNNGLVSPSSLALNIKEEF
NT seq 852 nt   +upstreamnt  +downstreamnt
atgtacgtcagttacctgcagctggacaaggagccccccatgtacgcgcaccagagcccg
gtgagccgccacccggggctcagcctcagcccgcagagcttcccggtgccccccccgcag
tactcggacttcccgagctaccaccaccaccacccggggctcagcgtcgacccctcccag
caggccggcccgggccccggcggctggagcccggcgtacccgcccccccctgcgcccacg
cgcgatgactggtcctcccatcactacacggcgggggggcccccgggggcctccgccgtg
acggggccctcactgggcttcagccccccggatttccccgggcagcccccctcgctgctg
cccccctccctgaatgccacggtcggacagctgtcccccggctccccccgcaggaggaac
ccgtacgactggatccgaacctctgcgccgcccagcaacccgaacgggaagacacgaacc
aaggataagtaccgggtggtgtacacggaccaccagcggctggagctggagaaggagttc
cactacagcaaatacatcaccatccgtcggaaggcggagctcgccacggcgctgagcctg
tcagagagacaggtgaagatctggttccagaaccgacgggccaaagagcgcaaaatcaac
aagaagaagctccagcagcccgcctcctctacaaccacacccaccccgcccgccggaaac
gggggaggaaccggtggggccggcatccacggaaacagcagcagcagcgttgccatggtg
acaagcagcagcggcaacaacgggctggtgtccccgtcttctctggcgctgaacatcaag
gaggagttctga

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