Oryzias melastigma (Indian medaka): 112143018
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Entry
112143018 CDS
T07439
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oml02000
]
112143018
Transporters [BR:
oml02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
112143018
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
112143018
NCBI-ProteinID:
XP_024122511
Ensembl:
ENSOMEG00000004405
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Position
LG14:22043049..22061254
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AA seq
612 aa
AA seq
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MSTNEKNDLATVIVPNGLPQGPKKVEDRGHWGTKAEFILTVMGAIIGPGNVWRFPYLCYR
NGGGVFFIPYLLFIFTCGIPLFFLETALGQFTSQGGITCWRRICPLFQGMGYASHLIIMF
GATSYIMILTWSFFYLFSSFSSDLPWASCGNEWNTDTCFDSNLNNSQFRHNSTLPVVEFW
QRRVLKVSSGIEDVGSLRWELVLCLILSWIICYFCIWKGIKSTGKAAYFTATFPFLILFI
LLIRGVTLPGAIDGIIYYLYPDISRLSDPQVWMDAGTQIFFSYAIGLGFLTSLGSYNHYN
NNCYRDCFYLCLLNSATSIVAGFAIFSVLGFMTYEQGVDISEVAESGPGLAFIVYPRAVA
MMPMPQVWSVCFFLMIILLGLDSQFVGMECVMTSLVDHFPNYLQKGYRREIVLLIICCFC
CLLGLPMVTEGGIYLLQLLDHHVCSGTTLLLLSFCESISIGWVYGADRFYNDISNMIGYR
PHIFMKYCWKYITPFVCFGTFIFSIVKYSPLKFSSTYVYPLWANILGWFIATVSLLLIPL
FVLLKVIQGEGSLRQRLFLLCQPEADLDRTQPPSGQGSIGSCSQTELKPLTQNGELRHLQ
QFNCTVDSCPVN
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgaacgagaagaatgacctggcgacggttattgttcccaatgggctcccccag
ggaccgaaaaaggtggaggacaggggacactgggggaccaaagccgagttcatcctcacg
gtgatgggagcaatcatcgggcccgggaatgtgtggagattcccctacctgtgctaccga
aatgggggaggtgtgtttttcatcccttaccttttgttcatattcacctgtggaatacct
ctgttcttcctggagacagccctgggtcagttcaccagccaggggggcattacatgctgg
aggagaatttgtccacttttccaaggaatgggctatgccagtcacttaatcatcatgttt
ggcgccacctcctacatcatgatcctcacatggtctttcttttacctgttctcctccttc
agttcagacctgccttgggcctcatgtggaaatgagtggaacacagatacttgctttgac
agcaatctgaataacagccagttcagacacaacagcactcttccagttgtggagttctgg
cagcgtcgagttttgaaggtctcaagtggcattgaggatgtgggcagcttgaggtgggag
ctggtcttgtgtctcatcttgagctggatcatctgctacttctgcatctggaagggaatc
aagtcaactggaaaggcggcctacttcacagccacattccccttcctcatcctgtttatt
ttgctcataaggggtgttaccctgccaggggcaatagatgggatcatctactacctgtat
cctgacatttctcgtttgtcagatccgcaagtgtggatggatgccggcactcagatcttc
ttctcatatgccatcggtctcggcttcctcacttctctggggagttataatcattacaac
aataactgttatagagactgtttctacttatgtttactgaacagcgccaccagcatcgtt
gccggttttgccattttttctgttctaggattcatgacatatgaacaaggtgtggacatt
tctgaggtggcagaatcaggcccaggcttggcttttattgtctacccacgtgctgtagct
atgatgcctatgcctcaggtgtggtcagtgtgtttcttcctcatgatcatcctgctagga
ctggatagtcagtttgttggtatggagtgcgtgatgacatcactggttgatcatttcccc
aattacctgcaaaaaggctaccggcgtgagatcgttctgcttataatctgctgtttctgc
tgcctgctgggactccccatggtcactgaggggggtatatacctccttcagttgttggac
catcatgtctgcagtggaaccactctgctgctcctctccttctgtgagtccatcagcatt
ggctgggtctatggtgcagaccgtttttacaacgacatctccaacatgattggctaccgc
ccacatatatttatgaaatactgctggaaatacatcaccccctttgtctgctttgggacc
ttcatcttctccattgtgaaatattctcctctgaagttcagcagcacttatgtttatcca
ctgtgggccaacattctgggttggttcattgccacagtttccctgttgcttatcccgctg
tttgtgttgcttaaagttatccagggggaaggttctctgcggcagcgtttgtttctgctc
tgccaacccgaggccgacctggaccgcacacaaccaccttctggtcagggaagcattggc
tcctgctcccagacggagctcaagcccctcacccagaatggggaactcagacaccttcaa
caatttaactgcacggtggacagttgtcctgtcaactag
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