Oryzias melastigma (Indian medaka): 112143176
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Entry
112143176 CDS
T07439
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-7 isoform X1
KO
K04809
nicotinic acetylcholine receptor alpha-7
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04020
Calcium signaling pathway
oml04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112143176
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112143176
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112143176
Ion channels [BR:
oml04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
112143176
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF5665
Motif
Other DBs
NCBI-GeneID:
112143176
NCBI-ProteinID:
XP_024122714
Ensembl:
ENSOMEG00000007844
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Position
LG16:7986101..7998581
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AA seq
620 aa
AA seq
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MRKTVALWLLILATQLGVSVQGPHQRYLLKELLRDYNPMERPVANDSQALTVHFSYTLIQ
VMDVDEKNQILTTNAWLQMQWYDHYLQWNQSEYPGVKNLRFSPDQVWTPDILLYNSAHDK
FDATFKTNVLVNSSGFCEFLPPGIFVSTCNVDVRWFPFDIQRCELKFGSWTFDGWLLDIQ
MKEADVSGYMPNGEWDLMEVPGGRHEIFYDCCAEPYPDVTFVVTLRRRTLFYALNLLVPC
VLLSSMTLLVFLLPANSGEKISLGITVLLSLTVFMLMVAEIMPATSDSVPLIGQYFASTM
VIVGMSVVATVIVLQFHHHTPNSGQMPRWVHLVLLQWVPWFLRMKRPGEGAEPTLSNSQV
DSRSKTLSSPTTTTTTTTTIPTPAPSILPPSLSSLQASLVQLSHPLSNTLHHRSNSQAVM
LPNPGHRDPSPNPHLQPNGHLPYMGFQTSADLEPLQRSRVINHGRENCGPVGGERDGGTA
GGGGPVGDLPIHHNLQTSKLGSPPLEPPAAPEPDSSTAAPVPCGLEAECGRPAALHSQSA
MIRSAAVDNQLQALLVDVQFLVERVREQDRQVSLAEQWQFAAAIIDRLCLVGFSVFNIIC
TFAILMAAPNFGIALSKDFL
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaactgtggctctttggctgttgatactcgcgactcagctcggcgtgtcagtg
cagggtccacaccagcgctacttgctcaaggagcttctgagggattacaacccgatggaa
agaccggtggccaacgactcccaggccctcactgtgcacttctcctatactctaatacag
gtcatggatgtggatgaaaagaaccagatcctcaccactaacgcctggctgcagatgcag
tggtatgaccactacctgcagtggaaccagtcagagtatcctggagtgaagaaccttcgt
tttagccccgaccaggtctggacacctgatatattactgtacaacagcgctcacgacaag
tttgatgccacctttaagaccaatgtgctggttaactccagcggcttctgtgagtttcta
cctccaggaatatttgtcagcacatgtaatgtggatgtgagatggtttccattcgacatt
cagcgctgcgagctgaagtttggttcatggacttttgacggctggctgcttgacatccag
atgaaggaggcagatgtgtcgggatacatgcccaacggagagtgggacctcatggaggtt
cccggaggtcgtcatgagattttttacgactgctgtgcagagccttatcccgacgttaca
tttgtggtgacattacgaaggaggactttgttttatgcactgaacctccttgttccatgc
gtactcctctcctcaatgactctgctggtgttcctgctcccagccaactctggggagaag
atcagccttggcattacggttctgctctctctgacggtcttcatgctgatggtggcagag
atcatgccggccacttctgattcggtgccactgattggtcagtactttgccagtaccatg
gtgattgttgggatgtcagtggtggccacagtcatagtcctccagttccatcatcacact
ccgaacagcggacaaatgccacgttgggtgcacttggttctgctgcagtgggtgccctgg
tttctccggatgaagcgtcccggcgagggagcagaacctactctctccaacagccaagta
gactcccgtagcaagaccttgtcctccccaacaaccaccactaccaccaccaccaccatc
cccaccccagccccatccatcctcccgcccagcctcagctccctccaggccagcctggtg
cagctgagtcaccctctctcaaacacacttcatcacaggtccaattcccaggcagtgatg
ctccccaacccaggccatagagacccgagccccaatccacaccttcagcctaatggccac
ctgccctacatgggcttccagacctctgcagacctggaaccactgcagaggagcagagtc
atcaatcatggcagggagaactgtgggcctgttggaggagaaagagatggaggcacagcg
gggggaggaggacctgttggagatttaccaatacatcacaacctgcaaacttccaaactt
gggagtccccctttggagcccccagccgctccagagccagactcatcgactgcggccccc
gtgccgtgtggcctggaggccgagtgtgggagaccagctgctctacattcccagagcgcc
atgatccggtctgctgcagtggacaaccagttgcaggctcttctggtggacgtgcagttt
ttggttgaacgcgtccgcgagcaggatcgccaggtcagtctggcagagcagtggcagttc
gccgccgccatcatcgaccgcctctgccttgttggattcagcgttttcaacatcatatgc
acctttgccatcctcatggctgcacccaactttggaatagcactttcaaaagacttcctc
taa
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