Oryzias melastigma (Indian medaka): 112144956
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Entry
112144956 CDS
T07439
Symbol
mars1
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00450
Selenocompound metabolism
oml00970
Aminoacyl-tRNA biosynthesis
oml01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
112144956 (mars1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112144956 (mars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oml01007
]
112144956 (mars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oml03016
]
112144956 (mars1)
Enzymes [BR:
oml01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
112144956 (mars1)
Amino acid related enzymes [BR:
oml01007
]
Aminoacyl-tRNA synthetase
Class I (U)
112144956 (mars1)
Transfer RNA biogenesis [BR:
oml03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
112144956 (mars1)
Prokaryotic type
Other AARSs
112144956 (mars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_C_3
Anticodon_1
GST_C_2
GST_C
Metal_resist
GST_N_3
GST_C_6
tRNA-synt_1e
HTH_23
GST_N_2
Motif
Other DBs
NCBI-GeneID:
112144956
NCBI-ProteinID:
XP_024125643
Ensembl:
ENSOMEG00000018411
UniProt:
A0A3B3CGI8
LinkDB
All DBs
Position
LG5:26267821..26287235
Genome browser
AA seq
915 aa
AA seq
DB search
MKLFVSEGNPHCLKVLAALELTAVKCDVQYVNHEDKVVQFLSHPALPALLLPSGQQLFSA
NAICRYLFEVSGQNCNDHCNQWLEWEVTVLQPALLRALRSAVLQGKGSDVSQILQSPLNF
LDQSLLKGGKPYLTGEAISVADVVLWAALHPILSDSSFTLGEHPSVKTWFDQVAAVHSCQ
SAVQKVLQGKGLQAMKSYMQRQPAPPNSQCRDAQPCNNNPAESEERQHSVSEEECEAAAL
TWSKGLSSCPPTDKQHPILPQEGKRNVLVTSALPYVNNVPHLGNIIGCVLSADVFSRYGR
LRGWNMLFVCGTDEYGTATENKAREEGLTPQQICDKYHAVHSSIYSWFQIDFDFFGRTTT
EKQTEIAQNIFWRLHEHGYLVEDTVEQLRCEKCQRFLADRFVEGTCPHCSYPEARGDQCD
KCGRLINAVELRDPQCKVCRQTPVIRSSKHLFLDLPKLESQLEQWLEKSTSTGDWTTNAK
QITHSWIRDGLKPRCITRDLHWGTPVPHPDFKEKVFYVWFDAPIGYLSITANYTNEWEKW
WKNPQQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVNHLVATEYLNYEDTKFSKSRG
VGVFGDMAKDTGIPSDVWRFYLLYVRPEGQDSAFSWADMAMKNNSELLNNLGNFINRAGM
FVTKFFEGCVPVMELQREDKELLAVVGWELQQYIQLMDKVKIRDALKHILNISRHGNQYI
QVNQPWKKIKGDESERQRAGTVTGVAVNIACLLSVMLSPYMPLVSQTIRDQLNAPQSCVY
TMLQGGGTFVCSLSAGHRIGTVSPLFQKLEAEQIEALKKRFGGQQAPFQSTSSTPAAAPA
AAIKVAAVEGGDSEKAEQLAKAVAEQGDKVRALKAQKAEKDVITAEVSKLLELKTQLAVA
EGKNPEPTSKKGKKK
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttttcgtgagcgaaggcaacccgcactgcctgaaggtgttagcagcgctggaa
ctgacagcggttaagtgcgacgtgcagtatgtcaaccacgaagataaagtggtgcaattc
ctcagccatccagctctgccagctctgcttctgccgtctggacaacaactgttcagtgcc
aacgccatttgcagatacctgtttgaagtaagtggacaaaactgcaatgaccattgcaac
cagtggcttgaatgggaagtcacagttcttcagcctgcacttctgcgggctcttcgctcg
gcagtgctgcaggggaaaggatcagatgtgtcccagatccttcagagtcccctgaacttc
ctggatcaaagcttactgaagggaggcaagccatatctaaccggggaagctatttccgtt
gctgacgttgttttatgggccgcactgcatccgattttatctgactcctcatttacgtta
ggggagcacccgtctgtgaagacctggtttgaccaggtggccgctgtgcacagttgtcag
tctgcggtgcagaaagtgctgcaggggaaaggcctgcaggccatgaagagctacatgcag
aggcagcccgctcctccaaacagccagtgcagagacgcgcagccatgcaataacaaccct
gctgagagcgaggagcgccagcattccgtttcggaagaggagtgcgaagcggctgctctc
acctggagtaaaggtttgagctcctgtccaccaacagacaaacaacaccccattttacca
caggaggggaaaagaaacgtccttgtgaccagtgcactgccttatgtcaacaacgtcccc
cacctgggtaacatcattggctgtgttctcagcgccgatgttttctccaggtacggccgg
ctgcgaggctggaacatgctgttcgtctgcggcacagacgagtacggcacggcgacggag
aacaaggccagagaagagggcctgacgccccaacagatctgcgacaagtaccacgctgtc
cactccagcatctacagctggttccagatcgactttgacttttttggcagaaccaccaca
gagaagcagacagagatagctcaaaatattttctggcgactccacgagcacggatacctc
gtggaggacacagtggagcaacttcgctgtgaaaagtgccagcgtttcttggctgaccgc
ttcgtagaaggcacatgtccccactgcagctacccagaagcccggggcgatcagtgtgac
aagtgtgggcgcctcattaatgctgtggagctaagggatccgcagtgtaaggtctgcagg
cagactccagtaatccgttcctccaaacaccttttcctcgacctgccaaagctagaatcc
cagctggagcagtggttggagaagtcaaccagcacaggagattggacaacaaatgccaaa
cagatcactcactcctggatcagagatggactcaagcctcgttgcatcactagggacctg
cactggggaacacctgtacctcaccccgacttcaaagagaaggtgttctatgtgtggttt
gatgcccccattggttatctgtctatcactgccaactacaccaatgaatgggagaagtgg
tggaaaaaccctcagcaggtggagctgtacaacttcatggccaaagacaatgtgccgttc
cacagcgttgtgttcccctgctccctactgggagcccaggacaactacactctggtcaac
cacctcgttgccactgaatatctaaactatgaggacacaaagttctccaagagccgtggc
gttggcgtgtttggagacatggccaaagacacaggaatcccatccgatgtctggcggttc
tatctcctatatgttcgtccagaaggacaagactctgctttctcctgggctgacatggcc
atgaagaacaactctgaacttctcaacaacctgggaaacttcattaaccgagccggcatg
tttgttaccaagttctttgaaggatgtgtgcccgtgatggagctgcagcgcgaggacaag
gagctgctggctgtggtgggctgggagctgcagcagtacattcaactcatggacaaagtc
aaaatccgggatgccctcaaacacatccttaacatttctcgtcatggaaaccagtatatc
caagtcaatcaaccctggaagaagatcaagggagacgaatccgaaaggcagcgtgctggc
actgtgactggtgtggctgtgaacatcgcctgcttactgtcagtgatgctgtcgccctac
atgccactggtcagccaaaccatccgggatcaactcaacgctccccagtcttgcgtctac
accatgttgcaaggcggcggcacctttgtatgctccctgagcgcaggccaccgcatcggc
acggtcagtcccttattccagaaactggaggcggaacagatcgaagctttgaagaagaga
tttggtggacagcaggcgccattccagagcacttccagcactcctgctgctgctcctgca
gctgccattaaagtggcagcggtggaggggggggactcggagaaagcggagcagctggca
aaggcggtggcggagcagggggacaaggttcgagccctgaaagcccaaaaggcagagaag
gacgtgatcacagctgaagtgtcaaaactgctggagctcaagacacagctggctgtggcg
gaagggaagaaccccgagcccacatctaagaagggcaagaagaaatga
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