Oryzias melastigma (Indian medaka): 112148047
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Entry
112148047 CDS
T07439
Symbol
abcb9
Name
(RefSeq) ATP-binding cassette sub-family B member 9
KO
K05656
ATP-binding cassette, subfamily B (MDR/TAP), member 9
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml02010
ABC transporters
oml04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112148047 (abcb9)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112148047 (abcb9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112148047 (abcb9)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oml02000
]
112148047 (abcb9)
Membrane trafficking [BR:
oml04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
112148047 (abcb9)
Transporters [BR:
oml02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
112148047 (abcb9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
AAA_22
ABC_membrane_2
AAA_29
AAA_25
AAA_30
DUF4191
RsgA_GTPase
nSTAND1
Motif
Other DBs
NCBI-GeneID:
112148047
NCBI-ProteinID:
XP_024130602
Ensembl:
ENSOMEG00000003239
UniProt:
A0A3B3D117
LinkDB
All DBs
Position
LG9:31472006..31485090
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AA seq
806 aa
AA seq
DB search
MGTKVVLCCSVLYVLLDSIITTVLYTHGSQPAIFLDDALNFNILQSVLDLWGTLLLRASL
LLGASIGVSWNKEDGPPRVAKLTTFIVFLCMIVITYALAKLLMLTELEPLSHQPWFLSLI
GWTCASSLCVTLLWRQLGKKSSSVSSLSIHSSSRSGGGGGSEDTEKLMETAGEEDEKEEE
GQEKGKDTKSSSGATLGRLLGYCKKDTGLLSAAVFFLIISAVCEVFIPSYYGKAIDSIVS
QDKSDFSKHVITLTALASVSSLAIGMRGGVFTLTLARLNLRLRSHLFRTLMGQDIRFFDE
NHTGDIISRLSADTTQVSDLVSLNINIFLRSSIKGTGFLIFMFERSWKLTMVAVMGFPFI
ALVSKVYGEYYKKLAKEVQTTLAEANKIAEETISAMRTVRSFANETEETDSYCSKLSAMF
QLNKKQALAYACYMWSSCISELALEVSILFYGGHLVMTGQTSSGTLIAFFIYMLELGECL
ENIASVYTGLMQGVGAAEKVFEYLDRKPEHPADGTEAPDACTGLVEFKDITFAYPTRPET
DILQGVSFALLPGEVTALVGPSGSGKSSCVSLLENFYLPQQGQVLLDGKPVNTFQHTYLH
SKVALVSQEPVLFARTVKENITYGLTGVPMEAVVQAAIKANAHDFITALPKGYDTSVGEK
GTQLSGGQKQRVAIARALIRNPTVLILDEATSALDAESEHMVQQALNNIMQDHTVLVIAH
RLSTVEKADNIIVIDRGRVVEQGSHSHLMASSGLYSKLVQRQVLGIETGAEVFNSSESSW
KGGGGRTRRRQSSSSSASGAECTPCY
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgggcactaaagttgttttgtgctgcagcgtgctgtatgttttgctagacagcatcatc
accactgtcctctacacacatggatcacaaccagccattttccttgatgatgctctaaac
ttcaacatcctccagtcagtcttggacctctggggcactcttctgctccgagcgtccctc
ctgctgggggcctccataggggtgtcatggaacaaggaggatggccctccgagagtcgcc
aagctcaccacattcattgtcttcctctgcatgattgtcatcacttacgccctggccaag
ctgttgatgctgacggagctggagcctctgagccaccagccgtggtttttgagcctgata
ggttggacgtgtgcctcgtctttgtgtgtcacgctgctctggaggcagctagggaagaag
tccagctcggtgagcagtctcagcatccacagcagcagccgtagtggaggaggagggggc
tccgaggacactgagaagttgatggagacagctggtgaagaggatgagaaggaggaggag
ggtcaggaaaaggggaaagacacgaagagtagttctggagctacactgggacgcttgctc
ggctactgtaaaaaagatacagggctgctttctgctgctgtgttcttcctcatcatctct
gcagtgtgtgaagtctttattccttcctactacggtaaagcgatagacagcatcgtatcg
caggacaagagcgacttcagtaaacacgtgatcacactgacagcattggcctcagtcagc
tcacttgccatagggatgcgagggggagtcttcaccctgacgcttgcgagactaaacctt
cgtcttaggagtcatcttttcagaaccttgatggggcaagacatcagattttttgatgaa
aaccatacaggtgacatcatttcccgcctgtcagctgacaccactcaggtgagcgacctg
gtctccctgaacattaatattttcttgcggagcagcatcaaaggcactggcttcctcatc
ttcatgtttgagaggtcatggaagctcacaatggtcgccgtcatgggattccctttcatc
gctctcgtttctaaagtgtatggcgaatactataagaaactggccaaggaagtgcaaaca
accctcgcagaggccaataaaattgcagaggaaaccatctccgccatgaggacggtgcgc
agcttcgcaaacgagaccgaagagacggactcttactgttcgaagctctcagccatgttc
cagctcaacaagaagcaggccctggcctatgcgtgctacatgtggtccagctgtatctca
gagcttgcccttgaggtttcgatcttgttctacggaggccaccttgtgatgactggtcag
acgagcagtgggactttgattgcttttttcatatacatgctggaactaggagaatgtctt
gagaacattgcatccgtctacaccggcctcatgcagggagtgggagctgctgagaaagtc
tttgagtatttagacaggaagcccgaacacccagcggatggtacagaagctccagacgcg
tgcaccggtctggttgagttcaaggatatcacctttgcttatccaacgcgacctgagacc
gatattctgcagggagtgtcatttgctctgctgcccggtgaggtcaccgccctggtgggg
ccttcaggcagtggaaaaagctcctgtgtgagtctactggaaaacttctacctcccacag
caaggccaagtgctgctggatgggaagccggtaaacaccttccagcacacctatctgcac
tccaaggtggctctcgtgagtcaagagcccgtgctgttcgcacggacggtgaaggagaac
atcacttatggactgaccggagttcccatggaagctgtggtgcaagcagccatcaaggct
aatgctcatgatttcattactgccctccccaaaggctatgatacaagtgttggtgaaaaa
ggtacccagttgtctggaggacagaagcaaagggtggccatcgcacgagctctcatccgc
aacccaacagttctcatcctggacgaggcgaccagcgctctggatgcagagagtgaacac
atggttcagcaggctctgaacaacatcatgcaggatcatacggtgctggtcatcgcccac
cggctgagcaccgtggagaaagcagacaacatcatagtgattgacaggggtcgtgtggtt
gaacagggatcccacagtcatctgatggcttctagcgggctctattctaaactggtgcag
aggcaggtgttgggcattgagactggagcagaagtcttcaattcatctgaaagttcctgg
aaaggtggtggaggaaggacccgcagaagacaaagcagcagcagctctgcgagcggggcg
gagtgcaccccgtgctactaa
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