KEGG   Oryzias melastigma (Indian medaka): 112148346
Entry
112148346         CDS       T07439                                 
Name
(RefSeq) nucleolysin TIA-1 isoform X1
  KO
K13201  nucleolysin TIA-1/TIAR
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oml03019]
    112148346
   03041 Spliceosome [BR:oml03041]
    112148346
Messenger RNA biogenesis [BR:oml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     112148346
Spliceosome [BR:oml03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    112148346
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 RRM_Nup35 Calcipressin Nup35_RRM_2 RRM_3
Other DBs
NCBI-GeneID: 112148346
NCBI-ProteinID: XP_024131179
Ensembl: ENSOMEG00000020931
LinkDB
Position
LG9:complement(30220251..30230231)
AA seq 386 aa
MEDEQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHAA
ASLAAMNGRKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFAPFGR
ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPKT
TYESNSKHLSFEEVMSQSSPSNCTVYCGGVSTGLTEQLMRQTFSAFGQIMEVRVFPDKGY
SFVRFNSHESAAHAIVSVNGTSIDGHVVKCYWGKETPDMMNSMQQMSIPQQNKIGFPAAQ
PYGQWGQWYGNGPQISQYVPNGWQVPTYGVYSQGWNQQGFNHLPASAGWTGMSAISNGGV
MEPTQGLNGSMLANQPGMGAAGYPTH
NT seq 1161 nt   +upstreamnt  +downstreamnt
atggaggacgaacaacctagaaccttatacgtggggaacctgtccagggatgtcacggag
cctctcattctgcaggtctttacacagataggaccctgcaagagctgtaaaatgatcgtt
gatacggcaggaaatgatccatactgctttgtggagttctatgaccacaggcatgctgct
gcttctctggcagccatgaatggaaggaaaataatgggtaaggaggtcaaagttaactgg
gccacaacaccaaccagccagaaaaaagacacaagtaatcattttcacgttttcgttgga
gacctcagtccagaaatcaccacagaagatgttaaagcggcctttgccccgtttggcagg
atatcagatgctcgtgtggttaaagatatggctacagggaaatccaaaggctacggcttt
gtgtcgttcttcaacaaatgggacgctgagaacgccatccagcacatggggggtcagtgg
ttaggagggagacagattcgaactaactgggccacaagaaagccccccgccccaaagacc
acctacgaaagtaattccaagcacctatcctttgaggaagtcatgagtcagtccagccca
agtaactgtactgtgtactgtggtggagtcagcaccggactcacagagcaactgatgaga
cagaccttctctgctttcggacaaatcatggaagtcagagtttttccagacaaaggttat
tcgtttgtgaggttcaactcccacgagtcagcagcccatgccattgtgtctgtgaatggc
acttcaatagacggtcatgtagtaaaatgttactggggtaaggagactccagacatgatg
aactccatgcagcagatgtcgattcctcagcagaacaagatcggcttccctgcagcccag
ccctatggacagtggggccagtggtacggcaacgggccccaaatcagccagtatgttcca
aacgggtggcaggtccccacctacggtgtctatagccagggatggaaccagcagggcttc
aatcacttaccggccagtgctgggtggactggcatgagcgccatcagtaacggtggggtt
atggagcctacacagggactgaatgggagtatgctagccaaccagcctggcatgggagct
gcaggataccccacacactga

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