Oryzias melastigma (Indian medaka): 112148346
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Entry
112148346 CDS
T07439
Name
(RefSeq) nucleolysin TIA-1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112148346
03041 Spliceosome [BR:
oml03041
]
112148346
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
112148346
Spliceosome [BR:
oml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112148346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
112148346
NCBI-ProteinID:
XP_024131179
Ensembl:
ENSOMEG00000020931
LinkDB
All DBs
Position
LG9:complement(30220251..30230231)
Genome browser
AA seq
386 aa
AA seq
DB search
MEDEQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHAA
ASLAAMNGRKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFAPFGR
ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPKT
TYESNSKHLSFEEVMSQSSPSNCTVYCGGVSTGLTEQLMRQTFSAFGQIMEVRVFPDKGY
SFVRFNSHESAAHAIVSVNGTSIDGHVVKCYWGKETPDMMNSMQQMSIPQQNKIGFPAAQ
PYGQWGQWYGNGPQISQYVPNGWQVPTYGVYSQGWNQQGFNHLPASAGWTGMSAISNGGV
MEPTQGLNGSMLANQPGMGAAGYPTH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaacaacctagaaccttatacgtggggaacctgtccagggatgtcacggag
cctctcattctgcaggtctttacacagataggaccctgcaagagctgtaaaatgatcgtt
gatacggcaggaaatgatccatactgctttgtggagttctatgaccacaggcatgctgct
gcttctctggcagccatgaatggaaggaaaataatgggtaaggaggtcaaagttaactgg
gccacaacaccaaccagccagaaaaaagacacaagtaatcattttcacgttttcgttgga
gacctcagtccagaaatcaccacagaagatgttaaagcggcctttgccccgtttggcagg
atatcagatgctcgtgtggttaaagatatggctacagggaaatccaaaggctacggcttt
gtgtcgttcttcaacaaatgggacgctgagaacgccatccagcacatggggggtcagtgg
ttaggagggagacagattcgaactaactgggccacaagaaagccccccgccccaaagacc
acctacgaaagtaattccaagcacctatcctttgaggaagtcatgagtcagtccagccca
agtaactgtactgtgtactgtggtggagtcagcaccggactcacagagcaactgatgaga
cagaccttctctgctttcggacaaatcatggaagtcagagtttttccagacaaaggttat
tcgtttgtgaggttcaactcccacgagtcagcagcccatgccattgtgtctgtgaatggc
acttcaatagacggtcatgtagtaaaatgttactggggtaaggagactccagacatgatg
aactccatgcagcagatgtcgattcctcagcagaacaagatcggcttccctgcagcccag
ccctatggacagtggggccagtggtacggcaacgggccccaaatcagccagtatgttcca
aacgggtggcaggtccccacctacggtgtctatagccagggatggaaccagcagggcttc
aatcacttaccggccagtgctgggtggactggcatgagcgccatcagtaacggtggggtt
atggagcctacacagggactgaatgggagtatgctagccaaccagcctggcatgggagct
gcaggataccccacacactga
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