Oryzias melastigma (Indian medaka): 112149830
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Entry
112149830 CDS
T07439
Symbol
sept4b
Name
(RefSeq) septin 4b isoform X1
KO
K16943
septin 4
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112149830 (sept4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112149830 (sept4b)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oml03037
]
112149830 (sept4b)
04812 Cytoskeleton proteins [BR:
oml04812
]
112149830 (sept4b)
Membrane trafficking [BR:
oml04131
]
Exocytosis
Calcium ion-dependent exocytosis
Septins
112149830 (sept4b)
Cilium and associated proteins [BR:
oml03037
]
Motile cilia and associated proteins
Sperm associated proteins
112149830 (sept4b)
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 2
112149830 (sept4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
RsgA_GTPase
GTP_EFTU
MMR_HSR1
VapE-like_dom
ABC_tran
AAA_16
AAA_29
AAA_22
Motif
Other DBs
NCBI-GeneID:
112149830
NCBI-ProteinID:
XP_024133545
LinkDB
All DBs
Position
LG13:18069476..18104182
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AA seq
546 aa
AA seq
DB search
MEHSSSNNRFRSAMFNHEEEFSEWNITSLFMEDSEHDPQSSSDEHDSPNQARHPDGQFFQ
HSSHSDDSEVENIMQEPQQQHEDHGGHEADRENEGQDRPHTPSYLRPPVAGRAQSDSGSE
PSLTQSKCVAFDLPSPLSPSRPKSPWSLFDPYNNNEDQDKEYVGFATLPNQVHRKSVKKG
FDFTLMVAGESGLGKSTLVNSLFLTDLYKDRKLLNAEGEESTDSTVFVLAHLGLETKVSF
FLLAERITQTVEITKHTVDIEEKGVKLKLTIVDTPGFGDAVNNTECWKSVADYIDQQFEQ
YFRDESGLNRKNIQDNRVHCCLYFISPFGHGLRPLDVEFMKALHEKVNIVPVLAKADTLT
PTEVKKKKIKIREEIEQYGIKIYQFPDCDSDEDEEFKQQDLELKESIPFAVIGSNTVVEA
KGKRVRGRLYPWGIVEVENSAHCDFVKLRNMLVRTHMQDLKDVTRETHYENYRAQCIQSM
TRMVVKERNRNKLTRESGTDFPIPMVPAVTESETEKLIREKDEELRRVKEMLQRYQDHLI
TQKDGH
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggagcattcgtccagtaacaaccggtttcggtccgcgatgttcaaccacgaggaagag
ttttcagagtggaatataacctcattgttcatggaggacagtgaacatgaccctcagtct
tcctcagatgagcacgactcccctaatcaggctaggcaccctgatggacagtttttccag
cattcaagccattcagatgattcagaagtggagaacataatgcaggagcctcagcagcag
catgaggatcatggaggtcatgaggctgatagggagaatgagggccaggaccgcccacac
accccgtcgtacctgcggcccccggttgcgggtcgggcccagtcagactcaggttcagag
cccagcttgacccagagcaaatgtgtggcgtttgacttgccgtcaccactcagtccctcc
agacccaagagcccctggtctctgtttgacccgtacaacaataatgaggaccaggataaa
gagtatgtgggctttgcaactctgccgaaccaggtgcaccgcaaatctgtcaagaaaggc
ttcgatttcacactgatggtggcaggtgagtcgggcctgggaaaatctactctggttaac
agcctgtttctgaccgatctatacaaagacaggaagctgctcaatgctgaaggtgaggag
agcacagactctactgtatttgttttggcacatttagggcttgaaactaaagtttccttc
tttcttcttgcagagcgaattacacaaactgtggaaatcaccaaacacacagtggacata
gaggagaaaggagtcaaactgaagctcacgatcgtggacacccctgggtttggtgacgct
gtaaacaacactgaatgttggaagtcagtggctgactacatcgaccagcagtttgagcaa
tacttcagggacgagagtggactcaaccgcaagaacatccaggacaaccgcgttcactgc
tgcctctattttatttccccctttggccatggccttcgacctcttgatgtggagttcatg
aaagctctgcacgagaaggtcaacatcgtcccggtgttggctaaagctgacacgctcact
ccgactgaggtcaagaagaagaaaatcaagatcagagaggagattgagcagtacggaatc
aaaatatatcaattccccgactgcgactctgatgaagatgaggagttcaagcaacaagac
cttgagttgaaggaaagcattccttttgccgtcatcggtagcaacaccgtggtggaggcc
aaagggaaaagagtgcgaggccgtctctacccatggggcatcgttgaagtggagaattcg
gcccactgtgactttgtgaagctcaggaacatgcttgttcgcacacacatgcaagacctt
aaagatgtgacccgagagactcactacgagaactacagagcccagtgcatccagagcatg
acccgcatggtcgttaaggagcgcaaccgcaataagctaaccagagagagtggcaccgac
ttccccatccccatggtgcctgcggtgacggagagcgaaacagaaaagctcatccgagag
aaagacgaggagctgcggcgggtgaaggagatgctgcagaggtaccaggaccatttgatc
actcagaaggacggccactaa
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