Oryzias melastigma (Indian medaka): 112150333
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Entry
112150333 CDS
T07439
Symbol
mindy4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4 isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112150333 (mindy4)
Enzymes [BR:
oml01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112150333 (mindy4)
Ubiquitin system [BR:
oml04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
112150333 (mindy4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
112150333
NCBI-ProteinID:
XP_024134316
Ensembl:
ENSOMEG00000013450
LinkDB
All DBs
Position
LG4:complement(7887228..7902217)
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AA seq
685 aa
AA seq
DB search
MIAFVEEVSSSLVREFLSRKGLRKTIACMDEEHPRTATSINNRSLLRQVLNMEDLYRKNK
LQVQNPPLKTLLEIIVKHHMEQQKKHKISTGEPASPATSAESSLICDTEEENITASYDSS
RSEIKATRSSPSTFLSLLSDENKSSGRDQKDVLAYDPEHQKYQPPTSLQQESESSVQKEP
EKKSEVIPRSRTNRNRRGVMSAPIPRETGRKFQSPRYEVSQPLFRREGENQCSFDGYLVK
DERQRSLERSKADVNTGGKLGLQRSAESLQSENNNGENRENKAKTVNKNHKPNFSDLNVS
ELVLDDVDDEDLQELSQVSPLRSVSERLPESRPIDQNTAADLKAVLLGTSLNCFSAEWRN
QGLTFSETHDLRYGIVQRKGGPCGVLASIQAFVLKKLLFENAESSDSDLQRLRPSNATRR
KCLLLALAEVLWKAGEEKQATVAVNSGLNQFTPSGRYRSDGVLEKMVFFTVDNLKDLQVI
LEQHIEQFETGTLGCLLLTVSAVLSRSIEKVRDDMDVSTSTLIGAHGYCTQELVSLLLCG
RAVSNVFDDDMELDSGDGNITLLKGIKNRCDVGLLSLFEHYNICKVGAHLKTPSYPIWVV
CSESHFSVLFGLQRELLTSEDRHLEFDLYYYDGLANQQEEIRLTVTVGKWSFQEVDSDSI
PPLELCIRTRWKNVEISWNDTEPIL
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgtttgttgaagaggtttcttcttcacttgtgcgggagtttctgagccgaaag
ggcctgagaaagacgatcgcctgcatggatgaagagcatccacggacagcaaccagcatc
aacaacagatcacttctgaggcaagtgctcaacatggaagatctgtacaggaaaaacaag
ttgcaggttcaaaatcctcctctgaagacattactggagattatagtgaagcatcacatg
gagcagcagaaaaaacacaagatctcgacaggagaacctgcttcacctgcaacttctgca
gaatcatctttgatatgtgacacggaagaggaaaacatcaccgccagctatgatagcagc
cggtctgagataaaagcaacacgctcgtctccatctacgtttctatcactgctgtcagat
gaaaacaaatcatccgggcgtgatcaaaaggatgtcttggcttacgatccagaacatcaa
aaataccagccaccgacttccctgcaacaagaaagtgagagttctgtccagaaggagcca
gagaaaaaaagcgaagtcatcccgaggagcagaactaaccgcaacagacgaggcgtgatg
tctgcaccaataccacgggaaacgggcagaaaattccagagtccaaggtatgaggtgtcc
cagccacttttcagaagggaaggagaaaaccagtgttcttttgatgggtatttggtgaag
gatgaacggcagaggagcttggaaagaagtaaagcagatgtcaacacaggggggaaactg
gggctgcaaaggtctgcagagagcctgcagagtgaaaacaacaatggagaaaacagagaa
aacaaagcaaaaacagtgaacaaaaaccacaaaccaaacttttctgatctgaatgtgtcc
gagttggttttggatgacgtcgacgacgaggatctgcaggaactctcccaagtatctcct
ctgaggtccgtttccgagcgtctccctgaaagccgcccgattgaccagaacacggccgcg
gatttaaaggcagttcttctgggcaccagcttgaactgtttcagcgccgagtggagaaat
cagggtctgaccttctcggagacgcatgacctcagatacgggatcgtacagagaaagggt
ggtccgtgtggagtcctagcatcaatccaagccttcgtcctgaagaagctgctgtttgaa
aacgcagagagcagcgattctgacctgcagaggttacgaccttccaacgcgaccagaagg
aaatgcctccttctagctttggctgaagtcctgtggaaggccggcgaggagaaacaagcc
acagtcgctgtaaattctggattgaatcagttcacaccgagtgggcgctacaggtctgac
ggagtgcttgaaaagatggttttcttcactgtggacaacctgaaggatctgcaggttatc
ctggagcagcacatcgagcagtttgagactggaactctgggatgtctcctgctgaccgtt
tctgctgttctgtcccgatccatcgaaaaagtcagagatgacatggatgtgtccacctcc
accctcatcggtgctcatggctactgcactcaggagctggtcagcctgctgctctgcggc
agagccgtttccaacgtcttcgacgacgacatggagctggactcgggcgacggcaacatc
acgctcctcaaggggatcaaaaaccgctgcgacgtcggcctgctgtctctgtttgagcat
tataacatctgcaaggtgggagctcacctgaagaccccctcttaccccatctgggtggtg
tgcagtgaaagccacttcagcgtgctgtttggcctgcagagggagctgctgacctccgag
gaccgacacctggagttcgatctctactattacgacggactggccaatcagcaggaggag
atccggctcaccgtcactgtcggtaagtggagcttccaggaagtagacagtgactccatt
cctcctctggaactttgtattcgcacgaggtggaaaaacgtggaaatcagctggaatgac
acagagccgattctttaa
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integrated database retrieval system
