Oryzias melastigma (Indian medaka): 112150890
Help
Entry
112150890 CDS
T07439
Symbol
gtpbp3
Name
(RefSeq) tRNA modification GTPase GTPBP3, mitochondrial isoform X1
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oml03016
]
112150890 (gtpbp3)
Transfer RNA biogenesis [BR:
oml03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
112150890 (gtpbp3)
Prokaryotic type
Methyltransferases
112150890 (gtpbp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
RsgA_GTPase
FeoB_N
Dynamin_N
cobW
GTP_EFTU
SRPRB
MMR_HSR1_Xtn
DO-GTPase2
FtsK_SpoIIIE
AAA_16
ABC_tran
Arf
MCM
NTPase_P4
Motif
Other DBs
NCBI-GeneID:
112150890
NCBI-ProteinID:
XP_024135182
Ensembl:
ENSOMEG00000004989
LinkDB
All DBs
Position
LG4:14339362..14352855
Genome browser
AA seq
515 aa
AA seq
DB search
MLPLLCICREIRKIAVHTHRKSGLPALYQLASTFSGAPAGLADADTIFALSSGHGKCGVA
VVRISGPASSMALRCMAGLRRHLPSPRTALLRSITDPSSKEILDRGLVLWFPGPHSFTGE
DSVEFHIHGGPAVITAVLQALGSMPGMRPAEAGEFTRRAFQAGKLGLTEVEGLGDLIHAE
TEAQRRQALRQMSGDLQRLYQDWSHRLKRCLAHVEAFIDFSEDELIEDGVLERVDSSVVS
LQAEIERHLKDERRGERLRSGVHVVIAGATNAGKSSLLNTLCQRPAAIVSSIAGTTRDVV
ETVLDIGGFPVLLSDTAGLRDSTDLIEQEGVRRARERVQQADLTLVVVDSVLLPCEVQKA
ADILQENLTSVLPDLKQTNKDRCLLVLNKTDLLPEAHRRELERELNEVSGLPPVCLLSCQ
THEGLQDFLSVFHSRLKILCGDPLSGAPTLTQARHRAHLQQCVVALAQYQKLRDTDLALA
ADGVRLALTSLGRITGKLGAEEILDIIFKDFCIGK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgcttttatgtatttgtcgggaaattcgtaaaattgctgtccacacacacagg
aaaagtggactacctgctctatatcaacttgcgtccaccttcagtggagctccagctggc
ctggcagatgcagacaccatctttgcgctgtcatccggtcatggcaaatgtggtgtggct
gtggtacgcatcagcggtcctgcctcatccatggctttgagatgcatggcgggactaagg
cgccacttgccttctccacggacagccctcttacgcagcatcacagaccccagctccaaa
gagatcctggaccgtggcctggtcctttggtttcctggtcctcatagttttacaggagaa
gacagtgttgagttccacatccacggaggccctgccgtgattacggctgtcctgcaggct
ctgggaagcatgcctggcatgaggcctgccgaagctggggagttcacgcgaagggctttt
caagcaggaaagctgggtttaaccgaggtggaaggacttggagatctaatccatgcagag
acagaagctcagcgaaggcaagctcttcgacagatgtctggagatctccaacgcctctat
caagactggagccacaggctgaaacgatgtctggctcacgtcgaggccttcattgacttc
agcgaggatgagctcattgaggatggggtcttagagcgagtggacagctcggtggtcagt
ctgcaggcagaaattgagcgacacctgaaggacgagagaagaggcgagcggcttcgcagc
ggagtccatgtggtcattgcaggagccaccaacgccgggaaaagcagcctcctcaacacg
ctctgtcaaagaccggcagccattgtttcctccatcgctggaaccaccagagacgtggtg
gagacggtgctggacatcggtggcttccccgtccttttgagtgacacagctggcctcaga
gacagcacagacctgatagagcaggagggggttcgccgggcgcgagagagggtacaacag
gctgatctgactctggtggtggtggactctgtcctgcttccctgtgaggtacagaaagct
gcagacatccttcaggagaacctgacgagtgttctgcctgacctgaagcagaccaacaaa
gacaggtgtctcctggtgctaaacaagacagatctgctgcctgaagctcacagacgggag
ctggagcgggagctgaacgaggtctctggactcccccctgtgtgtctgctctcctgtcag
actcatgaggggctgcaggacttcctctcagtgtttcacagccgacttaagattctgtgc
ggtgaccctctgtctggtgctcccaccctgacccaggcgcgccacagggcccacctgcag
cagtgcgtggtggctctggctcagtatcagaaactgcgtgacaccgacctggctctggca
gctgacggggtccgtctagctctcaccagcctggggaggatcactgggaaactcggagcg
gaggagatcctggatatcatcttcaaagacttctgtattggaaaataa
DBGET
integrated database retrieval system
