Oryzias melastigma (Indian medaka): 112150919
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Entry
112150919 CDS
T07439
Symbol
lsg1
Name
(RefSeq) large subunit GTPase 1 homolog isoform X1
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112150919 (lsg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oml03009
]
112150919 (lsg1)
Ribosome biogenesis [BR:
oml03009
]
Eukaryotic type
Pre-60S particles
GTPases
112150919 (lsg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
RsgA_GTPase
AIG1
Motif
Other DBs
NCBI-GeneID:
112150919
NCBI-ProteinID:
XP_024135224
Ensembl:
ENSOMEG00000022379
LinkDB
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Position
LG4:complement(12350553..12355646)
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AA seq
632 aa
AA seq
DB search
MGKKKAGGGVGLGRALIKERLQASRGNKRGDSWLHTSELNDGYDWGRLNLQSVTEQSSMD
DFLATAELAGTEFVAEKLNIEFVPAEARAGILRKEEKIRLRKLHEENKHFLRIPRRPHWD
ESTSPEALQQDEKDSFLLWRRTLAKLEEEQKLILTPFEKNLEFWRQLWRVIERSDIVVQI
VDARNPSLFRCADLESYVKEVSPDKVNMLLVNKADLLSREQRKIWARFFEKEGLRAVFWS
ALAEGNRLDAEEKGMEVDDPECGESDPEEDELPCNEDLSNKGAAGENVGNQEESEEEENP
QESVTVDEEDWHTCSEDEEEGDGGTPTSSNQTFHNSSRLLRKDELLDIFKAVHKGPKCKE
GQLTVGLVGYPNVGKSSTINTILRNKKVSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMP
SFVSTKAEMICSGILPIDQMRDHVPAISHVCQTIPRHVLEGTYGINIIRPREDEDPDRPP
TSEELLTAYGYMRGFMTSHGQPDQPRSARYILKDYVNGKLLFCHPPPHIKAEDFQPQHSK
FQRRDADMSHFSTATNTQGKIKRIENVVDKNFFHQENVRALTKGVQSIMGYKPGSGPVAQ
DSSKPQQGKPWKMHGNKNKKQKLRRSTKHLDA
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaaaaggccggcgggggagtgggactggggagagctctgatcaaagaaagg
ctccaagcaagccgaggaaacaagagaggggactcgtggctacatacaagtgaactgaac
gatggctacgactgggggcgactaaacctccaatcagtgacagagcagagctctatggat
gactttctggccactgctgagttagcagggacagagtttgttgcagagaaactcaacatt
gaatttgtgccagctgaagccagagctggcatattgagaaaagaggagaaaattcggctg
aggaagctgcacgaagaaaataaacatttcttaagaattcctcgtcgtccacattgggat
gaaagtacaagtccagaagcgcttcagcaggacgaaaaagacagcttcttgctgtggaga
agaacacttgcaaaactggaagaggaacagaagttaattctgaccccatttgagaaaaat
cttgaattctggaggcagctgtggagagtgattgagagaagtgacatcgttgtccagatt
gttgatgccagaaatccttcactgttcagatgtgctgatctggagtcgtatgtgaaggaa
gtgtcgccagataaagtgaacatgcttctagtgaacaaggccgacctcctgagcagagag
cagagaaaaatctgggccagattctttgagaaagagggtctgagagcagttttctggtct
gcacttgctgaagggaacaggctggatgcagaagaaaagggcatggaagtggatgatcca
gagtgtggagagagtgatccagaggaagacgaactgccttgtaatgaagacttaagcaat
aaaggagcagctggtgaaaatgtgggaaatcaggaagagagtgaggaagaggaaaaccca
caggaaagtgtaactgttgatgaagaggactggcacacgtgctcagaagatgaagaggaa
ggagatggaggaactcccacatcatccaatcaaacattccacaattccagtcgacttcta
cgtaaggatgagctgctcgacatttttaaggctgtgcacaaaggacccaaatgtaaagag
ggacagctgacagttggactggtaggatatcccaacgtaggaaaaagttccaccatcaac
actattttaaggaacaagaaggtttccgtatcagccacacctggacacactaagcacttt
cagactttgtatgtggagccgggcctgtgcctctgtgactgccctggtttggtgatgccc
tccttcgtttccaccaaagctgagatgatctgctcagggattctgcccatagaccagatg
agagatcacgtacctgcaatctcccatgtgtgccagacgattcctcggcatgtgttagaa
ggcacatatgggattaacatcatcagaccacgagaggatgaagatcctgacaggcctccc
acctcagaagagctgctgacagcgtacggatacatgaggggttttatgacgtcacacggg
cagcctgatcagccccgatcagctcgctacatcttaaaggattatgtcaatggaaagctt
ctgttttgccatcctcctccacacatcaaggctgaagacttccaaccgcagcacagcaag
tttcagaggagagacgccgacatgtctcatttctccacggcaacgaacacgcaggggaaa
atcaagagaatcgaaaatgttgttgataagaacttctttcatcaggagaacgtgcgcgct
ctcaccaaaggagtccagtccattatgggttacaaaccaggcagtggacctgtcgcacaa
gacagctctaaaccccagcagggaaaaccctggaagatgcacggcaacaagaacaagaag
caaaagttacgcaggagcactaagcatctggatgcctga
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